ZMP
si:dkey-253i9.4
Ensembl ID:
ZFIN ID:
Human Orthologues:
RAPGEF2, RAPGEF6
Human Descriptions:
Rap guanine nucleotide exchange factor (GEF) 2 [Source:HGNC Symbol;Acc:16854]
Rap guanine nucleotide exchange factor (GEF) 6 [Source:HGNC Symbol;Acc:20655]
Rap guanine nucleotide exchange factor (GEF) 6 [Source:HGNC Symbol;Acc:20655]
Mouse Orthologues:
Rapgef2, Rapgef6
Mouse Descriptions:
Rap guanine nucleotide exchange factor (GEF) 2 Gene [Source:MGI Symbol;Acc:MGI:2659071]
Rap guanine nucleotide exchange factor (GEF) 6 Gene [Source:MGI Symbol;Acc:MGI:2384761]
Rap guanine nucleotide exchange factor (GEF) 6 Gene [Source:MGI Symbol;Acc:MGI:2384761]
Alleles
There are 5 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa14351 | Nonsense | Available for shipment | Available now |
sa19478 | Nonsense | Available for shipment | Available now |
sa11830 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa14351
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000087670 | Nonsense | 53 | 1525 | 3 | 31 |
ENSDART00000141077 | Nonsense | 75 | 1463 | 4 | 28 |
ENSDART00000146630 | None | None | 1316 | None | 23 |
The following transcripts of ENSDARG00000061459 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 1 (position 19954384)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 1 | 20478801 |
GRCz11 | 1 | 21171738 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GTGTGTGTGTGTNNNNNNNNTNNNNCTAGTCCTGATGACATCGGGACCTGCTGGTA[T/G]ATCCTTCTGTCTGGCTCGGTCTTCATAAAGGAGTCTATGTTTCTGCCCCG
Long Flanking Sequence:
ATATTTTAAAATATTTCGATATTTTAAATCAAAATATTTTAGACATTAGAAACAAGACAAAAGTAAGAACATTTTTTTGCAGCATGATGGAGACTTTTACTCATGAAATCATAAACTTACTACTTAATACATAAACGGCTCAGTTTTTGTGGTAAAACACTCCATATTGCTTTGTACATAAAAGCAGTCATTTTGAATGCTTGTCAGACAGACAGACAGACTTTTCATGTCTGACTTTGCGAGATCAGCAAACCACGGATGCCCTCTTGCTCTGGGAAATAGTGAATTGACCAAGACTCATTCACCCACATTTATGATTCATCACATGTGTTTCCTTTGCTCATTATGACGTTAATTGTTAGGTCACTGCTCCACCCAGAATATAGTAAGAGTGGACTAAAATAGAAATGGTGTGCTTTTCAGGGTGTGTAGTGTAATATTTATATCTGTGTGTGTGTGTGTGTTTGTTCTAGTCCTGATGACATCGGGACCTGCTGGTA[T/G]ATCCTTCTGTCTGGCTCGGTCTTCATAAAGGAGTCTATGTTTCTGCCCCGCAGCAGGTACCAGTGTTTTGTGTTTGATTTGCCTCATTCTTTCTTTCTATGTCTTGTCCTGTTCTTTGTTTGTGTCATGAATGCTGTTTCATTTCAGTTTTGGTAAGCGTTCTGCTGGTAGTTTGCGTCGTGGTTGTGAGTGTATCGTCCTTGAGGCTTCAGAAATGATTGTGGTGAGTTACAAAGGCTGATGTATGTGCAGTAACCCATGCGTCCATTAGATCAGGATACACTTTTCCTCTCTTGTCTCTCTTAGGTGGACTACATGGATGACAATGACGAGTATTTCCAAAGACAAGCATCTCATCGACAATCCAGGAGAAGGTTTCGAAAGATAAACCAGCGTGGAGAGCGCCAGACCATTATTGATACCGTTGATAATTATCCAGTCAGCAAGCCGCCTCTGCCACCTGGATACCACTCTGTACGTTCTCTATCTCTCATACGCAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa19478
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000087670 | Nonsense | 432 | 1525 | 11 | 31 |
ENSDART00000141077 | Nonsense | 454 | 1463 | 12 | 28 |
ENSDART00000146630 | Nonsense | 307 | 1316 | 7 | 23 |
The following transcripts of ENSDARG00000061459 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 1 (position 19942497)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 1 | 20466914 |
GRCz11 | 1 | 21159851 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GACCATTCAATCGTCGACCCCACATATATTGAGGACTTTCTCTTAACCTA[T/G]CGTACCTTCCTGCCCAGTCCTCTGATTCTGGGACAGAGACTTCTAGACTG
Long Flanking Sequence:
ACTCTGTTTTATGCGAATGGAATTCTGGAATTTGGATTATGCCAAAATGCATCACAACTTTCTTTTTTTTTTTTTTTGATCAAAGTATTAAATGAGCTTTAAATCACCATATTAGACTAATTTCTGAAGAATTGTGTTAAGTTTATTGCACACTGAATCCGAAATTTTCGTCCATAATTTTCACACGTTAAAAAATTAATTCAACCTCAGGTTGTGTGAATCATATTGACACACTGCCTCTGAAACTTTAATCCGTCTTTAAAACATGTTAAAATAGAAGGCAGTTATTAAAGTTCTATTAAAAGTAATAAACTTGCAGGCTTAACATGTTATGTTTGGATACTGTTATACCAGAAAATAAGTCTGTCAATTCAGACAAAATTCTGATATACAATTTTACATGAATCTTTTTAGGGTACTGCTGAGAGGCTGATGCAGCACTTAGTGGAGGACCATTCAATCGTCGACCCCACATATATTGAGGACTTTCTCTTAACCTA[T/G]CGTACCTTCCTGCCCAGTCCTCTGATTCTGGGACAGAGACTTCTAGACTGGTTTAATGACCCCTGTTTACGGGACAAGGTAGGGTGACCAAATCACTCTCTTTACTGAAGAAATGCACTTTAATCTTCAGTTCGACTGGACTCACAGCTCTTCATTCTCTTTACACAGGTAACCCGGGTTGTGCTCTTATGGGTTAACAATCATTTTAGTGATTTTGAAGGAGACCCTGACATGACCAGTTTTTTGGAGGAGTTTCAAAGCAACCTGGAAAGAGAGGTGTGAAGCGCGTGCAAGCATTTATTCCTAATTTTATAATTTCTCATTCATAAATACAGTTAAAATTTATATTACATTACCACGTAACAGACAAGCATCCTCATCAATGTCCTCTTTTATCTGAGCAGAAAATGACCGGTCAGTTGAGGTTGCTCAACATCGCTTGTGCAGCAAAAGCCAAACCCAGAGTGATAACTGTAACCAGGACAGCTCGAGAGATCCCC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa11830
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000087670 | Nonsense | 967 | 1525 | 19 | 31 |
ENSDART00000141077 | Nonsense | 989 | 1463 | 20 | 28 |
ENSDART00000146630 | Nonsense | 842 | 1316 | 15 | 23 |
The following transcripts of ENSDARG00000061459 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 1 (position 19934560)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 1 | 20458977 |
GRCz11 | 1 | 21151914 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCGGTTGCGATCTACATGGGAACGGTTGCCTGGAAAATACGAGAAGCTTT[T/A]GGCTGAATTACAGGATGTTTTWGACCCTTCTCGCAACATGGCCAAATATC
Long Flanking Sequence:
TTTTCTTTAACGTTTTAACAGAAATCAGAAGGGAAATAAGCATAGCTAAAACCTAAATCAGTTATGTCTGCAATATTTTTTTTTCACATTTATAAATTTAGCATTTACTTTTATAAAAAGAGAGTAGCAATGTATAGATCAAGTATAAGATTAGCTGTTTTTATAATAATTAAAATAATAATAATATTAATTATATTATAATAAAAAAATTAATTACATATATATTTATATTAATATATATTTAAATATAATATAAAATGTATTATTTGTTTGTAAAAGTATAATATAGGACAAAATTTCTGTACAAATTGCACTTATGTACAAACACATCAAATGTGTTCTTTGCAAGAATTGGTCGACGTGCTAGTTCTAGAACTAGCCTGTTTCCTATCCATGTACTGAAGTGTATCTTTACATGTTTTGCAGTGGGTTCAATCTGGCTCCTGTCTCTCGGTTGCGATCTACATGGGAACGGTTGCCTGGAAAATACGAGAAGCTTT[T/A]GGCTGAATTACAGGATGTTTTTGACCCTTCTCGCAACATGGCCAAATATCGCAACCTTTTGAACAAACACAACCTTCAGCCGCCGGTGATCCCTCTGTTCCCCGTCATCAAGAAAGACCTCACCTTCCTTCATGAGGGTAACCTTCAACTTTCTCTTTTCATTTAGGAACTAAAATCCCAAAATTTTTATATGGTTTGGATAGAAAATGACTGTCAAACACATCTTCTTAAAGGCAACAACTCAGAGGTGGACGGTCTGGTGAATTTTGAGAAGTTGAGGATGATCGCACGAGAGATCAGACACGTGGTTCGAATGGCTTCCATCACCATGGACCCTGCATTGCTTTTTAAGACTAGGTAAAGAGACTAATCTACTAAAAAGAAGTATTTCATACATACTGCATAAAACCCAGACATTTTGAGTCAAATCAAACACATCTTTCTGCAACCCACTGAGACTTATTTATTCATATATATTTTTAATGAATCCTCTATATGTG
Associated Phenotype:
Not determined