ZMP
roraa
Ensembl ID:
ZFIN IDs:
Description:
nuclear receptor ROR-alpha [Source:RefSeq peptide;Acc:NP_001103637]
Human Orthologue:
RORA
Human Description:
RAR-related orphan receptor A [Source:HGNC Symbol;Acc:10258]
Mouse Orthologue:
Rora
Mouse Description:
RAR-related orphan receptor alpha Gene [Source:MGI Symbol;Acc:MGI:104661]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa15121 | Essential Splice Site | Available for shipment | Available now |
| sa38121 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa15121
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000032289 | None | None | 467 | None | 10 |
| ENSDART00000121449 | Essential Splice Site | 59 | 516 | 1 | 10 |
Genomic Location (Zv9):
Chromosome 25 (position 34896510)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 25 | 33364390 |
| GRCz11 | 25 | 33849817 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TATGGACCGCCGAGCTTAATGATGTATTTTGTGMTTTCAGCTATGAAAGG[T/G]AAGAGGARAGAAGCAAGCTGGGGNNNTTTTTTTTATTTGTCTGGGGCTTTTT
Long Flanking Sequence:
TTCTTTGATTCCCACAGTAAATCTCCCTTCATGATTAAACACACACACACACACACACTCAAACACCGTTTGTTGTCGTGCCTCTGTTTTGACTTTCTCTTGTTCTGCGATGAAGCACAAGAGACAGAGAAAAAAACAGAGTGACATCCCGGACGGGCCCCCCCTTTTTTTTTTTTCACACATCCATCCCGGCTCACAGCCACTGCAGTCTAACTAGAACAAGAACACACCCCCTTCCCCCTGCTCTGCCCCCTCCCCTCTCATAGGCTCCCCCCTCTGCCAATCACAGCCCAGCAGGGCGGAGCCAGCAGCCTGAGAGCACTGATGTCAGAGTCACATGGATTCTGGTGTGGTCATGCGAGCGCAGCTGAGCGGCAGAGCTATGCTGGCCAGCTGCTGCTGAAACGCCAGTGGACTTGCACCGCGCTAGCACTCGCAGCACCCAGCGCCTATGGACCGCCGAGCTTAATGATGTATTTTGTGATTTCAGCTATGAAAGG[T/G]AAGAGGAGAGAAGCAAGCTGGGGTTTTTTTTTATTTGTCTGGGGCTTTTTGGAAACTTCCTTTCTTGCAAGCGAGCCGAGCAGCAAAAGGGCTTTATTCATAGTCAGCCAACTCTCTGTTTGAGCGTCTTGTGTAAAGAGAGAGAGAGAGAGTGTGTGTGTGTGTGTGTGAGTGTTGATGGCTTGTGCAAGTGTTATGGCATCCCATTCTGCAAGGAAATGAAGTGATAAGTATGCTCTGAAGCAGTTCAGTGTTAAAGAAGATGATTTCTTTTATTAGAAGAAGAATTCCTGAGCTGTTATTAGCGATTGCACAACTCATTTTTAATATTTTACGTTTTGTATTTAAGGGGGTGTGTGGGGGGGGGGGGGGTTAACTTACCTAGCAAAAGTCTAAGAACTAAGGATCTCAATTTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGCCGAAGAGGTTGTGGAGAGTTTGAGTCAGGACGCTGGACGTGCCATCATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa38121
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000032289 | Nonsense | 349 | 467 | 8 | 10 |
| ENSDART00000121449 | Nonsense | 398 | 516 | 8 | 10 |
Genomic Location (Zv9):
Chromosome 25 (position 35004400)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 25 | 33472163 |
| GRCz11 | 25 | 33957590 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTTCTGTCTGCACGCTGACAGGCTGCGACGACTTGATCAGCTCTGTCTTC[G/T]AGTTTGGGAAAAACTTGTGTTCTATGCACCTCTCTGAAGACGAGATCGCC
Long Flanking Sequence:
CAAAACATAGTATATAAAACCTTTATCCTTTTCTAAATATGGCTATTTTAATGTTTTTGTTTTTTCATTTAGTGCCGCTATTTTTACATTTAACCATTATGGAATGTAAGTTTTCAATCCTAGTGATTGTATTCAGAAGTAGAGGGAACAATGTTGTGTCTAGATGGTGTTTAGCTTGGGAAAGTAAAGCAAAAAATGCTGCTGTAGACGATCTGCCAGTGTTTGTCTGACTCACGAGTGTTACTCGTGTTTGTTAGTGACCCCAGTCACGGTTACATAAACCTTCTCACTCGCCAAAGCAAGATTATCCTGGACGGGCGGGGGGGGGAGAAAAACGTGGCAGGAAAATTCATTGAGTGACGCTGAAGGATTGCATTGTTCTTACCTCTGTGCCACCCTGACATCTGCTAAAAGATCAAGTGTCTGCTCGTCTCCGTCTCACTGTTTTCTCTTCTGTCTGCACGCTGACAGGCTGCGACGACTTGATCAGCTCTGTCTTC[G/T]AGTTTGGGAAAAACTTGTGTTCTATGCACCTCTCTGAAGACGAGATCGCCCTGTTCTCCGCCTTCGTCTTGATGTCTGCCGGTAAGCAAACTCTGTGTTAAAATCCCCAAAATTATCCACAATCCATGGTTTACCTTCAGAATCATACATGAAGATGGAAAGGATAGTGTTAGGAAGAATGGTTGAGCAATTTTCTTTTTCCTTACCGAGGCCAGAAGTTAGGTTTTCCAATCAATCAGTATGTGTGGTGTTAATGCCATGTTGTAATTATCATAATTGCGAGATTACATAATCTAAAACGCATTTAAAACTCCTCATAGAACTAGTAATCAAAGCCAATAAAGTGAATTTTCCAGTGTTCCGATGATATGAACACTTCAGAATTAAATCTAAGTGAGGAATTCTTGTTTTTAGCGACACAAGTGGCCATTAGGTGAATTGCAGCCAGCCTGGTTTATACTTCTGCGTCAGGAGATTGGCATGACCCACGGCGCATGTTA
Associated Phenotype:
Not determined