ZMP

cops2

Ensembl ID:

ENSDARG00000004785

ZFIN ID:

ZDB-GENE-040625-15

Description:

COP9 signalosome complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q6IQT4]

Human Orthologue:

COPS2

Human Description:

COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis) [Source:HGNC Symbol;Acc:30747]

Mouse Orthologue:

Cops2

Mouse Description:

COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana) Gene [Source:MGI Symb

Alleles

There are 4 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa12873	Essential Splice Site, Missense	Available for shipment	Available now
sa16281	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa12873

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

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Mutation:

T > C

Consequence:

Essential Splice Site, Missense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000006124	Essential Splice Site	124	443	None	13
ENSDART00000133872	Missense	125	282	4	8

Genomic Location (Zv9):

Chromosome 25 (position 33356491)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	25	31966893
GRCz11	25	32377850

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

TGAGAAATCCATYAACTCCATTTTAGACTATATCTCAACCTCCAAACAGG[T/C]AATGGTATGTTTTACATTGCTGTGTGAGTTTGCATTKYATTCAGTTTCAT

Long Flanking Sequence:

ATAATGCTGCTGATATGATTTTAAAGCATAAATAACTGCATTTTAACTTAGAAAATGAATAATCACCTTCTTTTTGTTTTGCAGGTGCTGGAATTGGAGGGTGAGAAAGGAGAATGGGGATTCAAAGCACTGAAACAAATGATCAAGATCAACTTCAAACTGGTATGTAGTTATATAGTTTATTATAGTATAAAGTATTATTTGTTTGTTCGCCTAAAACATTATGAATATGAAATAAAATTGGGTAATGTCATAAAAAGATTCTATATCTGTTTGATAGTTTTTTTTTCATTTCTCAACCAATTATATATATAAGAATTATTGATCTGTTTGGAAATGACGTTGATTCATTTATTTTCTTCTGATTTCATAGACTAATTTTCCTGAAATGATGAACCGGTACAAACAGCTTTTGACTTATATTAGGAGCGCTGTCACCAGAAATTATTCTGAGAAATCCATCAACTCCATTTTAGACTATATCTCAACCTCCAAACAGG[T/C]AATGGTATGTTTTACATTGCTGTGTGAGTTTGCATTTCATTCAGTTTCATTACATTATCAACCCTCGTAATACATTCAAGTCCTGTAAGAAGTGCATTATAGTTTTAAACTAATAAAGAATCTAAAAGAATTATTATTATTATTATTAATATTATTATTATTAAGGAATTATTATTATAATAACAAGGTGATGCAGTGGCGCAGTAGGTATTGCTGCCGCCTCACAGCAAGAAGGTCGCTGGGTCGCTGGTTCGATCCTCGGCTCAGTAGGTGTTTCTGTGTGGAGTTTGCATGTTCTCCCTGCGTTCACGGGGGTTTCCTCCGGGTGCTCCGGTTTCCCCCACAACCCAAAGACATGCGGTACAGGTGAATTGTGTAGGCTAAATTGTCCGTAGTGTATGAGTGTGTGTGTGAATGTGTGTGTGTGGATGTTTCCCAGAGATGGGTTGCGGCTGGAAGGGCATCCGCTGCGTAAAAAATGTGCTGGATAAGTTGGCGGT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa16281

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000006124	Nonsense	273	443	8	13
ENSDART00000133872	Nonsense	275	282	8	8

Genomic Location (Zv9):

Chromosome 25 (position 33351129)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	25	31961531
GRCz11	25	32372488

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

CAGACTTTTTTGAAGCGTTCAAAAACTAYGATGAGTCYGGAARCCCCAGA[C/T]GAACCACTTGTCTGAAGTACCTGGTCCTGGCCAACATGYTRATGAAGTCT

Long Flanking Sequence:

TGGTTTGTTTTGTGCACCCTTGCAAAGTTGTTTTTCTTTAGTTTGTTTGTTTTTGTACAGTTGTTTTGTTTTATTTTTTAGTGTGTTTTTATTTGGTTTTTGTGGGCGTGTAATTGGAAAAGTGTTTTTTGTTTTAGTTATTCTTGTGCATTTAGTTGTTTTTTGCTAAAATTGAAAGTTTGCTTTCGGGTTTTGTTTTTGCTTTTTGGCTTGGTTTGTGTACAGTTGTAATATCTTTATTTCTATCAGAAAGTTTGTTTGCTTTTTTTTTTATTTACAATTTATTGACAGTTGTTGTTTTTTTCATTGGTGCGGTTTAGTCGCAAAGTTGGCTCATTATTTTATTTTTTATACAGCTTGTCTACTAATCATCTTTAACTTGTGGCTTGTTCTCTACAGAGTGCGGCGGTAAAATGCACCTGAGAGAAGGAGAGTTCGAGAAGGCACATACAGACTTTTTTGAAGCGTTCAAAAACTACGATGAGTCCGGAAGCCCCAGA[C/T]GAACCACTTGTCTGAAGTACCTGGTCCTGGCCAACATGCTGATGAAGTCTGGAATCAACCCGTTTGATTCTCAAGAGGTACGGCTGCACAAAATATCGTTTCTGCATCGATATCGCAATGTTCACACCCATAAAGTCATATAGCAGGATGTGCAATGTTGAGTTGGGATTATATTTGGTCAGCACTGCAGTTCAGAACACATGAGATTTGTGGAGTCACTGTAGAGTTTATCCATAATATACAGGGCTTGGACAATGAAACTGAAATGTCTGGTTTTAGACCACAATAATTCATTAGTATGATGTAGGGGCTCCTTTTGCGGCCAGTACAGCATCAGTTCTTCGATTTTGAGCCATTGTTCTTGCAGAATAGTGGCCAGGTCACTATGTGATGCTAATGGAGAAAAATGTTTCCTGACTCGCTCCTCCAAAACACCCCAAAGTCACTCAATAATATATAGATCTGGTGACTGTGCAGGCCATGGGAGATGCTCAACTTCA

Associated Phenotype:

Not determined