ZMP

spty2d1

Ensembl ID:

ENSDARG00000033889

ZFIN ID:

ZDB-GENE-050522-212

Description:

Protein SPT2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q6DGN6]

Human Orthologue:

SPTY2D1

Human Description:

SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:26818]

Mouse Orthologue:

Spty2d1

Mouse Description:

SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) Gene [Source:MGI Symbol;Acc:MGI:2142062]

Alleles

There are 3 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa38086	Nonsense	Mutation detected in F1 DNA	Not yet available
sa25228	Essential Splice Site	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa38086

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000046349	None	None	487	None	7
ENSDART00000073527	Nonsense	118	629	3	6
ENSDART00000132790	None	None	58	None	2
ENSDART00000146073	None	None	55	None	2

Genomic Location (Zv9):

Chromosome 25 (position 24965303)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	25	24144416
GRCz11	25	24241964

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TCATAGACCAGCCTAAAAAGAGACAGTCAAAAGGAAGCAGTACGGAAGAG[C/T]AGCAGAGTTCAACAAAATATGAAGGTGGTGATTATGATGATGAGGATAAT

Long Flanking Sequence:

TTTCAGTTGAAATTATTTTAACAACGAATAAAGATGTACATTTCAACACACTTCATGGGACCTTTTTTTGTAACCTATAAGGTATAATAATAATAATAATAATAACAACACATTTTAATTTGAAAAACAGCAATGGCACATATGCCAGAAAGTTAAACTTGCATGATTTTTTTTGTTTTTTTTTACTCCTGTCTATTAAGGTCATATCTATATGGTGTATTTAAGAATTCCTGCACTGGCATTCATTGTCATCTATTGCTGTTGATGTCATAATTTGTTTTCTGTTTTTGATAAAGTAAAAAAAACATTCTATGTGATCCTTAGAACAACAGGATAAGAAAGCAAAAGAAGATCTGCTGGCTAAAAGAGTGGAGCTGAAATCAGATAGGAAGGCACGAGCAATGGCATCACGAACCAAGGACAATTTCAGAGGTTACAACGGCATCCCTGTCATAGACCAGCCTAAAAAGAGACAGTCAAAAGGAAGCAGTACGGAAGAG[C/T]AGCAGAGTTCAACAAAATATGAAGGTGGTGATTATGATGATGAGGATAATTTTGACTATGAGGGCACAGATTCTGAATCTGAACCAAGTAGGCCTGTTAAACCTCAGGCTATATCTCGGCCTGAGTACTCCAACCGAGTAGAAAACAAACCAAAAAAACTCAGTGCTCCAGCTAGGCCCGCCTCGTCGTCAATGAACTTTGCAGATCTACTAAAACTTGCAGAAAAAAAGCAGTTTGAACCTGTGGAATTAAAAGTAGTGAAGAAGACAGAAGAGAGGCTTAGAACAGCAGAGGAGATCCGCGAACTTGAAATGGAGCGCAGAGTTAAGAAACTGGATAAAGGGAAGGATGTCAGATCAGACAAGAATTCAGGACAGAAAGACAGCCGATCTCAAACCAGCTCAAATCCTCAAAAGAAGCATGTAGACAGAGATGGCAAAAATGGAAGATTTCCAAGGCCATCAGAGGAGAAGCACCAGTCAAGCAGTACCAGCAAAAAG

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa25228

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > C

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000046349	Essential Splice Site	381	487	None	7
ENSDART00000073527	Essential Splice Site	523	629	None	6
ENSDART00000132790	None	None	58	None	2
ENSDART00000146073	None	None	55	None	2

Genomic Location (Zv9):

Chromosome 25 (position 24964086)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	25	24143199
GRCz11	25	24240747

KASP Assay ID:

554-7769.1 (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AGGACTGTGATTGGTCCCTCGGGCCACAGAATACTGGTCAAACCTTCTGG[T/C]AAGTAATATGAGAAGTGTTTCATGAACTTTTAATTTTAAGAGAGCTACAG

Long Flanking Sequence:

CAGGCGAAATCAAGTATTTCGGGAAGTTGTCCTCCTGGTGCAGCTAGACCAGGTCAAGGACCACATAAAAACTCAGCTCATGGAAGACCTAGTAATTTCAGTACCAGTGGACCTTCTCAGAAACCAGCAAATCCAGGGAAGTTATCGCGACCTGGGAGCAATGCTCCACCTCGGCCTGGTGGCAGTGGAGTGGTACGACCCTTCACTGGTGACCCCTCGAAGCAACCGAGACCAGGTGGTAATTTGCAAAGTCAGCAGTTTCCAGGAAGCTCCAGAGCTTCTTTAAATGGACCAAAGCGAATGGAACGTGGTGTTTCTGGGTCACAGATGAACAGGATGAGCTCTGGCCCCGGAAGATCCCAGTGCACTGTTGTTTCAGAGACCATTTCAACAAAGAACATTACACCGAGACCTGGGATGGTCCAAAGACCCCCAGGGCCACAAGGTCCCAGGACTGTGATTGGTCCCTCGGGCCACAGAATACTGGTCAAACCTTCTGG[T/C]AAGTAATATGAGAAGTGTTTCATGAACTTTTAATTTTAAGAGAGCTACAGACTCAACAAATTCCTTTAGTAGGAAAAAAGTTAGTAGTTCATATTTTTTTTCTCCCAACTTTACAATGTAAAAATGATCTTGTTAAATGACAGGGCATCTTTCTTATTCAAATATTATACAAAATTTTCAATTTCTAACTTTATAAACTTATCACTAAGGCCTTTTGTTTACACCTGATGTTATGCTTAAAAAAAGGATTTGATGTACTTAATTTTTGGTGAATATTGCAAGTTAAAGTACTTAACATTAATACTTAACATAATAATAAAAACATGTTTTTGGTGACTGAAATTACAGTCAGAAGTCACACACAAAAAACTGATTTTAGACATTTTTTTTCCTGCATCTCATAAGTGATATGTTCAAAGAGGGGAAGTGTTTATTTTTGTAAGCATTCTGTTTTTTTGTGAAGCCACAAATTATTTATTGCAGTTCATAAACATGAAAGA

Associated Phenotype:

Not determined