ZMP
setd6
Ensembl ID:
ZFIN ID:
Description:
SET domain-containing protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q803K4]
Human Orthologue:
SETD6
Human Description:
SET domain containing 6 [Source:HGNC Symbol;Acc:26116]
Mouse Orthologue:
Setd6
Mouse Description:
SET domain containing 6 Gene [Source:MGI Symbol;Acc:MGI:1913333]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa1825 | Essential Splice Site | Available for shipment | Available now |
| sa38042 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa1825
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000064573 | Essential Splice Site | 9 | 460 | 1 | 9 |
The following transcripts of ENSDARG00000043986 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 25 (position 17713698)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 25 | 17260539 |
| GRCz11 | 25 | 17356939 |
KASP Assay ID:
554-1817.1 (used for ordering genotyping assays)
KASP Sequence:
GACGGGTTTGCGTTTTAAAGAAATGGCGACGGAAGCAAAAAGACCAAAGG[T/C]AAGTTANNNNNGATTTTTTCTTAAGTTGTCAGTATAGTGACAGTTCACAAGTTAT
Long Flanking Sequence:
TATAACTATAGTTGTGTTACTACAGCATCTATATAATCCCAACAACAGATTAATTTAAGTACTGAAGTAGGCTATGGTAAAAAAAAACAAAAAAAAAAAACATGTGGAACGTGCTACAAACACTAAGGACTGATAGATTGACTTTCTTGTCGAAAATGTACCGATAGCTCGATTTGTACGTTGATTTTAAAGTCTAAAACCTTAATATTAAGTAAAACATCGCGGATTGTATCTATTCATTTTGATTAGTTTTTCTGCGGTTATCTCATGCAAGCATAGTAGAGGGCGCTCGTGCACAGTACTGTGTTTGTTTTTACACACACTGGAAGAAGAAGAAGTGACCAGCGCTGCTTATCACATGGAGGCATTATAGGAAAATATATTATTATATTTTTATGTTGTTTTTCCGTGCAGTCGTCACTATAACAATATAGACTTTTATCACTCACCGACGGGTTTGCGTTTTAAAGAAATGGCGACGGAAGCAAAAAGACCAAAGG[T/C]AAGTTAGATTTTTTCTTAAGTTGTCAGTATAGTGACAGTTCACAAGTTATTAATATATACTTGATATTGGGACACAGATGTTTTAGAGTTTCTATGTTTATTATAATGTGTGCCTTTAGACAGGTGATGAAAAGAGTGTGCTGGAGCCCCTGAACAACTTCTTGCTGTGGTGTGAAAGTGTGCAGCTCACTCTCAGCGATAAGGTAAGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTTGATAATTATTATAATTAAATTAAATACACAAATAATATAATGTGTGTATATTTGATATACATATCATAATGTTGTGTGCATGTATGATGTTATGCATGTGTTAATGTTATGTCGATTCTTGGGACGTTATACCTAATATTTATTCAGATTTACATTATATTATAAAATATTATTTTTTCATATTGTTTCGTATATTAAAATGAATTAAATAAACAAAATTAAATTTATAATAAAATATTGCTAGTAAAACGCTGTAATAGTC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa38042
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000064573 | Essential Splice Site | 133 | 460 | None | 9 |
The following transcripts of ENSDARG00000043986 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 25 (position 17712129)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 25 | 17258970 |
| GRCz11 | 25 | 17355370 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATTTGTCTCTTTGGCCAGATTTTAGGACTCTGGATCAACCCATGTTCTGG[T/C]GAGACCTTTCAGATATCCTTCACGGATCCTACTGATTATTATGGTCATCA
Long Flanking Sequence:
CTGAGGCAATATTAATCTCTGGGATTGTGAACCCACTTTAAGTATAAAATGCTTGATTATACAAGCTCTTGTCAAGATGATAAACTTAAGATATTTACTCACCATAGTCTACTTTAATTTCTATAGGTGTACTTAAGTAAAGAGGGTACAGCAGCAGAATATGGTATGCTTGCCAAAGAGGACATTGAAGAGGGACACGTCCTGTTCACCATTCCCAGAGATGCTCTTCTGCATCAGGGCACTACCAAAGTCAAAAAAGTGCTGGAAGAAGGTATGGAAACTTTCAGATGTATTCAAAAAACACCTTCTGTAGCAGTTTTGTAGCCTCCATATCTTGAATTCAAGTGTGTTTTCTAGGAAAGAAGTGTTTGGAGAGTGCGTCAGGCTGGGTACCTCTTCTTCTGAGTCTCATGTATGAGTACACCTCTTCAACATCCCACTGGAAACCATATTTGTCTCTTTGGCCAGATTTTAGGACTCTGGATCAACCCATGTTCTGG[T/C]GAGACCTTTCAGATATCCTTCACGGATCCTACTGATTATTATGGTCATCATGTTTAAGTTGAACCAGGCGCTAAAACATGTTAGAAATGTGTTAGCAAAACATGTAAGCCATTTGTTGAACATGCTCAAAACATGTTAATACTGAAACGTTCAATTCTTAGTCATGATATTTGCGTTTTAATAGGAATTCCAGCAATATGGTGAAATATGTTAGCCATATGCTAAAACATGAATGAAATGTGTTGCTATATCTTACTAAAACATGTACATAAATCTACAGGGTGGGCCATTTGTACGGATACACCTTAATAAAATGGGAATGGTTGGTGATATTAACGTCCTGTTTGTGGCATATTAGTATATGTGAGGGGGCTTGTAAATAACTCATGAAAGAATAAAGTTACGTTAAAACCAAGCACACCATTGTTTTTCTTGTGAAATTTCCAGTAAGTTTTTTTAAGGTGTATCCATAAATGGCCCACCCTGTAGATTTTAACAAA
Associated Phenotype:
Not determined