ZMP
zgc:153718
Ensembl ID:
ZFIN ID:
Description:
sorting nexin 22-like [Source:RefSeq peptide;Acc:NP_001038839]
Human Orthologue:
SNX22
Human Description:
sorting nexin 22 [Source:HGNC Symbol;Acc:16315]
Mouse Orthologue:
Snx22
Mouse Description:
sorting nexin 22 Gene [Source:MGI Symbol;Acc:MGI:2685966]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa37996 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa37996
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000075197 | Essential Splice Site | 125 | 220 | 3 | 6 |
| ENSDART00000085507 | Essential Splice Site | 203 | 298 | 3 | 6 |
| ENSDART00000136054 | Essential Splice Site | 125 | 127 | 3 | 4 |
Genomic Location (Zv9):
Chromosome 25 (position 6321009)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 25 | 5866320 |
| GRCz11 | 25 | 5993722 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCCTGCAGGTCAAACATTTTCATCCAACAAGCAAGAACTGCAGCTCTGAG[T/C]ATGTTTACAACCATTAGTAATCATTTGATAATTAATAAATAGTTATATAA
Long Flanking Sequence:
TGATGAATGGATTTCATGGTTTCTGACAACTGTTTTTAACATTGATAATATTCATAATAATAATATTCAAAATAATAATAAATGAAGATTTCTGAAGGAGATCATGTGATTAAGACTGGAGTTATGATTCTGAAAATTCAGTTTTGACATCCCAGTAATTAATTATATTTCAAGATATGTTTGAATAGAACCTTTATTTTAAGAAATAAATAATTTCACAATGTTACCGTATTTCCAATAATCAAAATGCAGCCTTAGTGAGCATCCTGAGACGAAATATTGACTTCAGGCGTAGTATATACTGCATAAAGTATTATTAAAATATAATCTATACATTATAATAATTCAGACTTCAACCGTACCGAGGTTATAACACTTCTTTTTTCATTGGCTGCCGATTGCAGGTGATTCTCTATCAGAATGATGTTGTTCCTCAAGAGCTTCTGGATTTCCTGCAGGTCAAACATTTTCATCCAACAAGCAAGAACTGCAGCTCTGAG[T/C]ATGTTTACAACCATTAGTAATCATTTGATAATTAATAAATAGTTATATAAATGTATAAGAGAAGGAATACCACCACTATTTTCAGGCTGATTAATGAGATCCTAATTGTCATTTTCAGTGAAAACCAGTCAGATTACTGTCGGGAGCAGGAATACAGGCAAGTTTATTCTTACCTGTAATCATAAAAGTACCTGTATAAGAGTTCATTCTTACTCATTTCACCTTCACCCAACATTTTTATTATTGAACAATGTTTTATTTTTTAATTTGTATATAGATATCAGTCATTTCATCAGCGAGTAGTTGGTTTTTCGGCTGACCCTTACCAGCTTGAATCCAGATCAGGTAAACGTCATTACAGAAATAGAGATTTATTTTACACCAGAATAGCTGCGATTATTCCTGTTGTGCTTATTTCTCCCTCCGCAGATCTCCCTGATATCGTGGTTGCCGGTGTCCTGCAGGGTTTTTACCCTAAAGATGTCAAAGTGAGTTTCAAA
Associated Phenotype:
Not determined