Busch Lab

ZMP

LOC100006249

Ensembl ID:
ENSDARG00000058585
Human Orthologue:
CHST2
Human Description:
carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2 [Source:HGNC Symbol;Acc:1970]
Mouse Orthologue:
Chst2
Mouse Description:
carbohydrate sulfotransferase 2 Gene [Source:MGI Symbol;Acc:MGI:1891160]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa37815 Nonsense Mutation detected in F1 DNA Not yet available
sa25206 Nonsense Mutation detected in F1 DNA Not yet available
sa30031 Nonsense Mutation detected in F1 DNA Not yet available
sa37814 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa37815
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000081475 Nonsense 47 423 1 1
Genomic Location (Zv9):
Chromosome 24 (position 5869259)
Other Location(s):
Assembly Chromosome Position
GRCz10 24 5756551
GRCz11 24 5785880
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGGACTAAAGAGCCTCAACAGTGTAACGTCCAGATGAGAAGCACTCCTTA[T/A]CAGGGCAGATCAGACATGCGGTTCCTTTACAGGCCATCGCTTGCTAAGAA
Long Flanking Sequence:
GTTTATTTCTGAGGACTGAGGGGAGATTCTGCGCACTGCAGTAACGCTACATTCAGCCATGCACGCGATTGGACTGTGGATGTGATGGATATTGAATATTTGCTGGCAAACGAGGAGATCACATTTGTGTTTTCAGTGAGAGCAAAGTTTGCTTGCACGAAGACATAATTTGGTGTTTGTGTGCTCGTTCATCGTGCTCGAGTGGATCAAAACCACTCTATTTTTTTCCAACAGATGAGAAGCAACCAGTTCTTACAACTTCAGTTGCCTGCTTTGGGGGAAAAGAATGGTGTTTATGACAGAAATCTCAAAACCTATCGCAATCATTCCACTAAGATAATCACCCAGCCTGGAATCGTAATGAAAGTGCTGCGGAGGAAAAGAATCATATTGTTTATAGCCTATTTTCTGCTGCTAGTTCTCACAATGCTCAACTTGGCTAACTATAGGTGGACTAAAGAGCCTCAACAGTGTAACGTCCAGATGAGAAGCACTCCTTA[T/A]CAGGGCAGATCAGACATGCGGTTCCTTTACAGGCCATCGCTTGCTAAGAAGAGACAGCTTGTGTATGTTTTGACCACATGGAGGTCCGGCTCATCGTTTTTCGGAGAGTTATTTAATCAGCACCCTGAGGTATTCTTTCTGTATGAACCGATGTGGCACATCTGGCAGAAACTATACCCGGGTGATGCTGTGTCCTTACAGGGAGCAGCGAGGGACATGCTGAGCTCGCTGTACCGCTGTGATCTTTCAGTCTTTCAGCTGTACAACAGCCCTGGGGGAAAAAACTTCACCTCGCTTGGACTTTTTGGTGCCACTCTTAATAAAGTCATCTGCTCGTACCCTCTTTGTTCTGCTTACAGAAAAGACGTGGTCGGCATGGTGGATGACAAAGTGTGCAAAAAGTGTCCTCCGCAAAGCCTTAGGCTTTTAGAGGAAGAATGCCTTAAGTACAACACTATAGTCATTAAAGGCGTGCGGGTTCTGGACGTCAACGTTTTGGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa25206
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000081475 Nonsense 66 423 1 1
Genomic Location (Zv9):
Chromosome 24 (position 5869204)
Other Location(s):
Assembly Chromosome Position
GRCz10 24 5756496
GRCz11 24 5785825
KASP Assay ID:
554-7874.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCAGATCAGACATGCGGTTCCTTTACAGGCCATCGCTTGCTAAGAAGAGA[C/T]AGCTTGTGTATGTTTTGACCACATGGAGGTCCGGCTCATCGTTTTTCGGA
Long Flanking Sequence:
GCCATGCACGCGATTGGACTGTGGATGTGATGGATATTGAATATTTGCTGGCAAACGAGGAGATCACATTTGTGTTTTCAGTGAGAGCAAAGTTTGCTTGCACGAAGACATAATTTGGTGTTTGTGTGCTCGTTCATCGTGCTCGAGTGGATCAAAACCACTCTATTTTTTTCCAACAGATGAGAAGCAACCAGTTCTTACAACTTCAGTTGCCTGCTTTGGGGGAAAAGAATGGTGTTTATGACAGAAATCTCAAAACCTATCGCAATCATTCCACTAAGATAATCACCCAGCCTGGAATCGTAATGAAAGTGCTGCGGAGGAAAAGAATCATATTGTTTATAGCCTATTTTCTGCTGCTAGTTCTCACAATGCTCAACTTGGCTAACTATAGGTGGACTAAAGAGCCTCAACAGTGTAACGTCCAGATGAGAAGCACTCCTTATCAGGGCAGATCAGACATGCGGTTCCTTTACAGGCCATCGCTTGCTAAGAAGAGA[C/T]AGCTTGTGTATGTTTTGACCACATGGAGGTCCGGCTCATCGTTTTTCGGAGAGTTATTTAATCAGCACCCTGAGGTATTCTTTCTGTATGAACCGATGTGGCACATCTGGCAGAAACTATACCCGGGTGATGCTGTGTCCTTACAGGGAGCAGCGAGGGACATGCTGAGCTCGCTGTACCGCTGTGATCTTTCAGTCTTTCAGCTGTACAACAGCCCTGGGGGAAAAAACTTCACCTCGCTTGGACTTTTTGGTGCCACTCTTAATAAAGTCATCTGCTCGTACCCTCTTTGTTCTGCTTACAGAAAAGACGTGGTCGGCATGGTGGATGACAAAGTGTGCAAAAAGTGTCCTCCGCAAAGCCTTAGGCTTTTAGAGGAAGAATGCCTTAAGTACAACACTATAGTCATTAAAGGCGTGCGGGTTCTGGACGTCAACGTTTTGGCGCCACTGATGGAGGATCCATCTCTGGATCTGAAGGTGATTCACCTCGTGCGAGAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa30031
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000081475 Nonsense 243 423 1 1
Genomic Location (Zv9):
Chromosome 24 (position 5868672)
Other Location(s):
Assembly Chromosome Position
GRCz10 24 5755964
GRCz11 24 5785293
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GATTCACCTCGTGCGAGATCCCAGAGCCGTCGCCAACTCCAGGATCAAAT[C/A]AAGGCACGGGTTGATCCGTGAGAACTTACAGGTGGTCCGAAGCAGGGATC
Long Flanking Sequence:
CGGCTCATCGTTTTTCGGAGAGTTATTTAATCAGCACCCTGAGGTATTCTTTCTGTATGAACCGATGTGGCACATCTGGCAGAAACTATACCCGGGTGATGCTGTGTCCTTACAGGGAGCAGCGAGGGACATGCTGAGCTCGCTGTACCGCTGTGATCTTTCAGTCTTTCAGCTGTACAACAGCCCTGGGGGAAAAAACTTCACCTCGCTTGGACTTTTTGGTGCCACTCTTAATAAAGTCATCTGCTCGTACCCTCTTTGTTCTGCTTACAGAAAAGACGTGGTCGGCATGGTGGATGACAAAGTGTGCAAAAAGTGTCCTCCGCAAAGCCTTAGGCTTTTAGAGGAAGAATGCCTTAAGTACAACACTATAGTCATTAAAGGCGTGCGGGTTCTGGACGTCAACGTTTTGGCGCCACTGATGGAGGATCCATCTCTGGATCTGAAGGTGATTCACCTCGTGCGAGATCCCAGAGCCGTCGCCAACTCCAGGATCAAAT[C/A]AAGGCACGGGTTGATCCGTGAGAACTTACAGGTGGTCCGAAGCAGGGATCCCAAACTCCGTAGGATACACTTTGTAGATCCCGGCCACAAAATCAGCAAGAAAGACGGTGCAGATTATCATTCAGTTGGAGCCATGGAGGTGATTTGTGACCGGACGTACAGGAGCCTGAGAACTGCCTTAAATCCGCCAGCCTGGCTGAAAGGGAAATACCTAGCAGTGCGCTATGAGGATCTGGTGGACAACCCAGTCAAAACACTCCGGAATGTTTATCAATTTGCTAATATCAGTGCCAATCTTGACATTGAGTCCTTCGCTCTTAACATGACGAACGGCACAAGTTCTTCCTCAAAGCCATTTATTGTTTCAGCCAGGAATGCGACTCAGGCGGCCAGTGCGTGGAGAACAGTGTTGAGTATTCAGCAGATCAAACAAGTAGAGGAGTACTGCCATCATGCCATGGCCATCCTGGGATATGAACATGTTAGAACAGCCGGAGAAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa37814
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000081475 Nonsense 256 423 1 1
Genomic Location (Zv9):
Chromosome 24 (position 5868634)
Other Location(s):
Assembly Chromosome Position
GRCz10 24 5755926
GRCz11 24 5785255
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCAGGATCAAATCAAGGCACGGGTTGATCCGTGAGAACTTACAGGTGGTC[C/T]GAAGCAGGGATCCCAAACTCCGTAGGATACACTTTGTAGATCCCGGCCAC
Long Flanking Sequence:
CTGAGGTATTCTTTCTGTATGAACCGATGTGGCACATCTGGCAGAAACTATACCCGGGTGATGCTGTGTCCTTACAGGGAGCAGCGAGGGACATGCTGAGCTCGCTGTACCGCTGTGATCTTTCAGTCTTTCAGCTGTACAACAGCCCTGGGGGAAAAAACTTCACCTCGCTTGGACTTTTTGGTGCCACTCTTAATAAAGTCATCTGCTCGTACCCTCTTTGTTCTGCTTACAGAAAAGACGTGGTCGGCATGGTGGATGACAAAGTGTGCAAAAAGTGTCCTCCGCAAAGCCTTAGGCTTTTAGAGGAAGAATGCCTTAAGTACAACACTATAGTCATTAAAGGCGTGCGGGTTCTGGACGTCAACGTTTTGGCGCCACTGATGGAGGATCCATCTCTGGATCTGAAGGTGATTCACCTCGTGCGAGATCCCAGAGCCGTCGCCAACTCCAGGATCAAATCAAGGCACGGGTTGATCCGTGAGAACTTACAGGTGGTC[C/T]GAAGCAGGGATCCCAAACTCCGTAGGATACACTTTGTAGATCCCGGCCACAAAATCAGCAAGAAAGACGGTGCAGATTATCATTCAGTTGGAGCCATGGAGGTGATTTGTGACCGGACGTACAGGAGCCTGAGAACTGCCTTAAATCCGCCAGCCTGGCTGAAAGGGAAATACCTAGCAGTGCGCTATGAGGATCTGGTGGACAACCCAGTCAAAACACTCCGGAATGTTTATCAATTTGCTAATATCAGTGCCAATCTTGACATTGAGTCCTTCGCTCTTAACATGACGAACGGCACAAGTTCTTCCTCAAAGCCATTTATTGTTTCAGCCAGGAATGCGACTCAGGCGGCCAGTGCGTGGAGAACAGTGTTGAGTATTCAGCAGATCAAACAAGTAGAGGAGTACTGCCATCATGCCATGGCCATCCTGGGATATGAACATGTTAGAACAGCCGGAGAAGCAAAAGACTTGAGTAAATCTTTATTGACTGCCTCCAAA
Associated Phenotype:
Not determined