Busch Lab

ZMP

B6E520_DANRE

Ensembl ID:
ENSDARG00000077437
Description:
Plexin A1b [Source:UniProtKB/TrEMBL;Acc:B6E520]
Human Orthologue:
PLXNA1
Human Description:
plexin A1 [Source:HGNC Symbol;Acc:9099]
Mouse Orthologue:
Plxna1
Mouse Description:
plexin A1 Gene [Source:MGI Symbol;Acc:MGI:107685]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa37762 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa37761 Essential Splice Site Available for shipment Available now
sa37760 Nonsense Mutation detected in F1 DNA Not yet available
sa14112 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa37762
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000109152 Essential Splice Site 283 1173 6 23
Genomic Location (Zv9):
Chromosome 23 (position 34715581)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 37659010
GRCz11 23 34659567
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCAGCTCTGTTGCGGTCAATATTGGACGTCACCCGTGCCACTTTAAAAAG[T/C]GAGTGTTTCTCTTCTATTCATATTTTGTGCCAAACTTCCACCACATTTTC
Long Flanking Sequence:
TGGAAACTATCCCATTTGTTTTTCCTATTATAGATGTCAATGGTTACAGGTTTCTAGTGTTTTTTCAATATGTTGTTCTTTGTGTTCAGCAGTTGAAAGGAACTGAAACAGGTTTGGAACAAGTGAATAACATTTAAATGATGACAGAATTTTCATTTATGTGTGAACTATCCCTTTAAATTTTGTTTTGCATATGTGATTTAAGCATACAATAAAAGGCACATGTGTCAAATTAGAGGAATTTCTACTGTATCTGAAAGCAGATTAAAATATATAGTGTTGGAGAAAGAAATGAATTTTCTGTTGCTTTAGGTTTATTTTCCAAGCAATGCTTTCTTCAATATTTAATTTTTCTACCTTAGACGCCATATTTCGCCCGTGTCCAGCCTGCTCAGGGACCCCTTTCAGGAGGAACCAGAATCACAATCGAAGGAAACCATCTCAACGCCGGCAGCTCTGTTGCGGTCAATATTGGACGTCACCCGTGCCACTTTAAAAAG[T/C]GAGTGTTTCTCTTCTATTCATATTTTGTGCCAAACTTCCACCACATTTTCTACCAGGATAAATAAATCACTTAACAATTGAATAACGCTTCAGAAAATGCTTAACGGAAAGGCAAGATGCGCATACATTTTGAAAATACACATAAAAACTAACTAATAATAATAATTTAGTTTATTTATAAATGTTGCCTCTCTGGACACCCAGTGTTGCCTTAGAACAAACATGCCAAAAACAATTAATAAAGCCGATGAGTGGGACTATGACTTAAAGTTGCAATCAGAATTAATAACCCCCCTGAATTATTAGCCCCCCTGATTATTTTTTTCTCCAATTTCTGTTTAACGGGGAGAAGACTTTGTCAACACATTTCTAAACATAATAGTTTTAATAACTCATCTCTAATAACTGATTTATTTTATATTTGCCATGATGACAGTAAATAATATTTGACTAGATATTTTTCAAGACACTTTTATACAGCTTAAAGTGACATTTAAAGG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa37761
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000109152 Essential Splice Site 575 1173 11 23
Genomic Location (Zv9):
Chromosome 23 (position 34688292)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 37631721
GRCz11 23 34686856
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCTGCAGATGGACAACCTGGAGTCCAGAGTCGCTCTCGAGTGCAAAGAAG[G/A]TGAGCTTTTGGTTATTTTTAAGTCAGGTCTCATTTGTGGCCTGCAGCTAT
Long Flanking Sequence:
TTTGGAGAAACAAGCTTGAAATGATCCAGTAATAATGGGACATTTTGAGCTGAATGGGTTTTCAATCTCCTAGCATGTCTCACAAATGTGATTGGCTCATGAAGTTTTAATTTGGGACTTGTGCAGAGCTGCTGTTGTGTTCTTGCTGCTAAAAATCAAAAGTTGATCCTCACAAATGAATTGCCTCAACAAATTGACGAATGCTAATGGCAGCTAATAGCAGATCTCATACCAGTCAGTCAAGTCTCCGGTCCCTGTGTTACAGATCCGGGCAGGAGGGTTTGAATATTCACCCGGGACGCTGCAGATCTACTCGGACAGCCTACTGACGCTGCCTGCCATCATTGGCATTGGAGGCGGTGGAGGTTTACTGCTGCTGGTCATCATTGCTGTGCTCATTGCCTACAAACGCAAGTCCCGGGATGCCGACCGGACACTCAAACGCCTCCAGCTGCAGATGGACAACCTGGAGTCCAGAGTCGCTCTCGAGTGCAAAGAAG[G/A]TGAGCTTTTGGTTATTTTTAAGTCAGGTCTCATTTGTGGCCTGCAGCTATTTGTCACAAACTGCATCGTAGTGTTGATGAGTGTTTTTTTAGCTGATTGATTTTGTTATTTTTTGTTTTATTTTCAGTCAAGTACTTTAATAAGATTTGCTATGGGCTGTTTTGTTATTGTAAAATGTACATACAGGTCAGTGACAAGTTAATTGTTCTGAGAATTTTGTAAAATGAGTGTACAAAATTATTATTGGATAGATGGAAGGATGGATGGATAGATAAATCTATTCAAATATACAGTGGGTGAATAAATTTTCAACACGTCTCTATTTGTCTCAGAAAACATATTTCTAAAGGTACTGTTGACTTTGCTTTTCACCAGATGATGATAGCAACCAAATAAATTTATATATGAAAAAAAATAATCTAATTATTTTACAAATGAAGTTTTGTGTAATAAAATAAAATGACAAGGGTAAAAAAGTTTTGAACACATGAAGAAAGGGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa37760
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000109152 Nonsense 1024 1173 21 23
Genomic Location (Zv9):
Chromosome 23 (position 34626382)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 37569811
GRCz11 23 34748766
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTTTTCCATCCTCATTCCTGTGTGTTTTCTATATTTTACAGTTTGCCGT[T/A]AAGGTTCTGGGTGAATGTGATAAAGAATCCTCAGTTTGTGTTTGACATCC
Long Flanking Sequence:
AAGTAACTTAAAAAAAAGTAACTTAAAAAAAAAATCAACATTTTTTTACAGCACTTCAAGTTAAGCCATTCTAAGAAAAGAAAAACAGTCAAGATAGACATATCAGATTTATCATAATGCGTGTAGTAGAGGGTTACATGAATGGCTGTTCTGTATTGCATATGAAAAAATGCAATATATAAGGCATTTTTACTTCTTTCATTACAGGGTACACTACAGAAATTCGTTGATGATTTGTTTGAGACGATATTTAGCACAGCGCATCGTGGCAGTGCTCTCCCTCTCGCCATCAAATACATGTTTGACTTCCTGGATGAGCAGGCGGACAAACACCAAATCACAGATTCAGATGTTCGGCACACCTGGAAGAGCAACTGGTGAGGAGCGACAATGTTTGAACGTCTCATTTGAGATGCATATATAATTACCATTTCATGAATTCAGCTAGTTTTTTTTCCATCCTCATTCCTGTGTGTTTTCTATATTTTACAGTTTGCCGT[T/A]AAGGTTCTGGGTGAATGTGATAAAGAATCCTCAGTTTGTGTTTGACATCCACAAGAATAGCATCACGGATGCGTGTCTCTCAGTCGTGGCCCAAACCTTCATGGACTCCTGCTCCACGTCCGAACACAAGCTCGGCAAAGATTCCCCCTCTAATAAGCTGCTCTACGCTAAAGATATTCCCAATTACAAGAACTGGGTAGAAAGGTAAGCAAGTGGAGATATTCAAGTTTTAGTTCACCCAAAAATGAAAATAATTAATTACTTATTCTCATGTCATTCCAACCCCTGAGACATTAGTTCATCTTCAGAACACAATTTAAGCTATTGTAGGTGAAATCTGAGAGCTCCCTCATCCTCCATACACTCGAAAAAAATATTTTTGCTGCTTGTTCAAACTACGTAATTAAAATGAGTTTTGGTTTGTGTTTTATTTTAAATACAACCTAATGGTTTTATGGTCAACCTACTTAAATTTGTAAAAGGGATTAAGTTAACTTAAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa14112
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000109152 Nonsense 1095 1173 22 23
Genomic Location (Zv9):
Chromosome 23 (position 34625577)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 37569006
GRCz11 23 34749571
KASP Assay ID:
2261-8061.1 (used for ordering genotyping assays)
KASP Sequence:
CCCAGATCATCAYGCTTAACTGTTTGTCTTGCCTTCCTACAGGTATTAYT[C/A]AGACATCGCACGCATGCCTGCCATCAGTGATCAGGACATGAGTGCTTATC
Long Flanking Sequence:
TCAGAACACAATTTAAGCTATTGTAGGTGAAATCTGAGAGCTCCCTCATCCTCCATACACTCGAAAAAAATATTTTTGCTGCTTGTTCAAACTACGTAATTAAAATGAGTTTTGGTTTGTGTTTTATTTTAAATACAACCTAATGGTTTTATGGTCAACCTACTTAAATTTGTAAAAGGGATTAAGTTAACTTAATCAATTTGTGTTAGCACAACAGTATTTTAAGGATTTTTTGGTTCCTTTTCTGGACTTTGAAAGGTCCTGTCCATGATGGATGAGGGAGTTCTTAGATTTAACCTAAATATCTTAATTTATGTAATTTCTTTGGGTCTTGGAGGTTTGGAGTAGCAGGAGGGTGAGTAATTAATAACGATTTAATTTTTTGGTCAAACTAATCTTATAAATAAGATATAATTTACATTGTTAATCCCTATTTATAACCGTCAAAGACCCAGATCATCACGCTTAACTGTTTGTCTTGCCTTCCTACAGGTATTACT[C/A]AGACATCGCACGCATGCCTGCCATCAGTGATCAGGACATGAGTGCTTATCTAGCGGAGCAGTCCAGACTCCATCTGAGCCAGTTCAACAGCATGAGCGCCCTCCACGAGATCTACTCCTACATCACCAAGTACAAAGACGAGGTAAGAGAAAAACAGCGTTATATCTTCAGGGTTCCCACGGGTCAGGGAATTCCTGAAATATCATGAAGATTTAAAAAGGTTTATTCTAGACATTGAAAGTCAGTGAATTTGTTAATGCATACAGTATATAGTTAAAGTCAAAGCAATTAGCCTTCTTGTGAATTTTTTTTCTTTTGTCTGCTCAGTGCTAAACCTGGATTTTGTGGGACTTTTTCTTTCATGTGGCCTAAAATTACTGATTTTTTGGTGACTTTTCTTAAAATGATTTGCAATATTTTCAGCATTTGGGGAAAATATCCTTAATTGTGATTTTTTTTTTTTTTTTTTTTTTTTGACAAATACTACGATTTCTATTTAA
Associated Phenotype:
Not determined