Busch Lab

ZMP

zgc:64141

Ensembl ID:
ENSDARG00000022560
ZFIN ID:
ZDB-GENE-040426-1379
Description:
chloride channel Kb [Source:RefSeq peptide;Acc:NP_956676]
Human Orthologues:
CLCNKA, CLCNKB
Human Descriptions:
chloride channel Ka [Source:HGNC Symbol;Acc:2026]
chloride channel Kb [Source:HGNC Symbol;Acc:2027]
Mouse Orthologues:
Clcnka, Clcnkb
Mouse Descriptions:
chloride channel Ka Gene [Source:MGI Symbol;Acc:MGI:1329026]
chloride channel Kb Gene [Source:MGI Symbol;Acc:MGI:1930643]

Alleles

There are 6 alleles of this gene:

Allele Name Consequence Status Availability
sa8872 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa18332 Nonsense Available for shipment Available now
sa37699 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa32442 Essential Splice Site Available for shipment Available now
sa37700 Nonsense Mutation detected in F1 DNA Not yet available
sa1792 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa8872
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000029974 Essential Splice Site 140 693 4 20
Genomic Location (Zv9):
Chromosome 23 (position 24562125)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 24348601
GRCz11 23 24275142
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTGTGCTCTGTCCACCAGCTTCGCCCACAGCGTCTGCCCATRCTCTGCAG[G/A]TTACACAGCACTWAGAAATTAGGGCAATMATTTTGTTTCATTTAATTTWA
Long Flanking Sequence:
TAATGTTAATGTATGTGTCTGTATTTGTATCTGTTATGTGTATGTGTTTGCATCTGGCCAGAGTGTGTGCTGAATGTGAAGAAGCTCCTGGTGTCTCTCGCCAGCATGGAGTGGTACTGTTATGCTCTGTTAGGGATCATCACAGCTCTAATGAGCTTCTTCATGGACATGACTGTGGCGAAGCTGCTAAACGGTGAGCGGTTCCACCATGTCACTCAGAAAGCGTTTGGTAAATAATTTACATAGAGATGAATGCAGGTCGGCTAACTGTTTGAGTCGTTCTAGCAGCTGAATGTTGCAAGGTCTTTCAAAAACAGGTTTGACCTTACAGTTTCTCACCTCGGTCTGTGTCCTTCTCTCTCTCTTATTAGCCCACCAGTGGCTGTACGGCTGTCTGAAGGGTCACCACCTGCTGCAGTTCCTCTGCTGGACGCTTTACCCAGCCTGCCTCTGTGCTCTGTCCACCAGCTTCGCCCACAGCGTCTGCCCATACTCTGCAG[G/A]TTACACAGCACTAAGAAATTAGGGCAATCATTTTGTTTCATTTAATTTTATTTTATTTTTATTCAGTACATTAAAAAAAAGTTACACATTAAATTAATTTCAGGTCTACCAAATTTTGTCATCACTTTAGATACTTCTTACTTACAGTATAGGCATGTTTAATACAGTGTATGTGTAATTATTTAAATCTGTCAAACTATATATAAAAAAAGAAAAAAAAAGGGGAAGCCGATCTAAAATGAAAATGGAGTTACCTCACCTGCTTTGCACATTAGAACAAAAACATTTAACACACAGAAAAATAAAACATGTAGTCAGTTTTTGCCTTTTTAAAATTAAAAATGCTCTGCTTTACTTTACCAGTTTGATTTATACAATCTGAGAATACTGATATATAACTTCCTAGAAGTTGGAAGAATGAAAAGCATAATTATTGTCCATAATAATATGTACTAAAACAGTTATCATGGGCAGATTTACAACATGCACAAATATTAAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa18332
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000029974 Nonsense 193 693 6 20
Genomic Location (Zv9):
Chromosome 23 (position 24564288)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 24350764
GRCz11 23 24277305
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GAATAWATTGACCTTAAACTTATTATCTYAATAGGGCCCATTTGTCCATT[T/G]WTCTATCATGGTTGGTGCATTTATGAAYCGTCTGCATGTCTCCTGTCGTG
Long Flanking Sequence:
AGTAAGCATAATTTTCAAATATATAATTTCATAAAAATTACATTTAATCCACTTGACCCAATCAGTCAGCTCTGCATGGGCCTGACACCCTCGTAAGCAAAGCTGCTGTGAGTGACAGGGACAATTGCATTGGGATTAAGCTGAGGCAATATGAAACATGGACATGTTTAATCATAAACGTCGAGTATTGCTTGAGTAGGTCCGTCAGGTCCATTTGCTCATGCATAATGTTTTTCTCTCGACCCCTCAGGCTCTGGTGTTCCTGAAGCGAGGGCTATTCTCTTAGGAGTGGACATGCCAGATTACCTGTCTCTCTCCAATCTGTTTGCTAAAATGTTTGGCCTGATATGCACACTAGCCGCTGGCAGCACTGTGTTTCTTGGCAAAGTGGTAAAAAAATCTTATATGCAAATGAGGATGTGAAGATTAATCAAAAAATGACATGCTGCTGAATATATTGACCTTAAACTTATTATCTTAATAGGGCCCATTTGTCCATT[T/G]ATCTATCATGGTTGGTGCATTTATGAACCGTCTGCATGTCTCCTGTCGTGGCGGAAAGCAGGTAGCTAAACTGTAATATAATACATGAACCATACAGTCCACTTTTATTTTATTTTATGAAAACCAGATGGGAATTGTATAGAAGGCTACTTATGCTAATGACTCTTGTGGTGTCATTCATTTGCATCTGGCAGAGAGCAGCTAAAGGAGAAATGTTGGTTGTGGCATCAGCGGTGGGAGTTGCGAGCTGTTTTGGGGCTCCAATAAGCGGTGAGTTCAAGTGTTTACATGACATAATTTTCAACCAAAAAAAGAAAAAAATTGGCAACACTTCACTTGAAATGGTGTTCATAAGGCTATCATGAAACATTCATAATCATGACATTAAATATGTGACATAAATATGGGTCATTCACTCAGTTGTCATTTTAAATGCAAAGATGACATTAGCTGTGTTTCATTTTAGAGGCTGCATCCTCCGAAGGATGCAGACTTCAAAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa37699
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000029974 Essential Splice Site 239 693 7 20
Genomic Location (Zv9):
Chromosome 23 (position 24564560)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 24351036
GRCz11 23 24277577
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTGGCATCAGCGGTGGGAGTTGCGAGCTGTTTTGGGGCTCCAATAAGCGG[T/A]GAGTTCAAGTGTTTACATGACATAATTTTCAACCAAAAAAAGAAAAAAAT
Long Flanking Sequence:
GGCTATTCTCTTAGGAGTGGACATGCCAGATTACCTGTCTCTCTCCAATCTGTTTGCTAAAATGTTTGGCCTGATATGCACACTAGCCGCTGGCAGCACTGTGTTTCTTGGCAAAGTGGTAAAAAAATCTTATATGCAAATGAGGATGTGAAGATTAATCAAAAAATGACATGCTGCTGAATATATTGACCTTAAACTTATTATCTTAATAGGGCCCATTTGTCCATTTATCTATCATGGTTGGTGCATTTATGAACCGTCTGCATGTCTCCTGTCGTGGCGGAAAGCAGGTAGCTAAACTGTAATATAATACATGAACCATACAGTCCACTTTTATTTTATTTTATGAAAACCAGATGGGAATTGTATAGAAGGCTACTTATGCTAATGACTCTTGTGGTGTCATTCATTTGCATCTGGCAGAGAGCAGCTAAAGGAGAAATGTTGGTTGTGGCATCAGCGGTGGGAGTTGCGAGCTGTTTTGGGGCTCCAATAAGCGG[T/A]GAGTTCAAGTGTTTACATGACATAATTTTCAACCAAAAAAAGAAAAAAATTGGCAACACTTCACTTGAAATGGTGTTCATAAGGCTATCATGAAACATTCATAATCATGACATTAAATATGTGACATAAATATGGGTCATTCACTCAGTTGTCATTTTAAATGCAAAGATGACATTAGCTGTGTTTCATTTTAGAGGCTGCATCCTCCGAAGGATGCAGACTTCAAAGGTGAGTCCTTCCAAGTCCACACAAGCCGAACCGAGTGTTTTGAAATGAGACGATCTAGCCTACAGAGGACTGATCTCGTCACCAGGCAACCGTAACAGCTGCTGTTAATAGGCGCTAATAACATTTGTAATGACTTTTTTCCAAGTGATTTTAAAACTTACTTAAGCGATCTGAAGGCAAAACAAGATTTACAGAAGCTGGAAATATATTTTCTTTGATCCATACATGTACACATAAAACTGTAAACTGTCTATAAAATCACTCTTTAGTAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa32442
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000029974 Essential Splice Site 280 693 8 20
Genomic Location (Zv9):
Chromosome 23 (position 24567087)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 24353563
GRCz11 23 24280104
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTGCGGCGCCATCACCTTCAGGCTGCTTTCTGTCTGTATTGGAGATCAAG[G/A]TAAGAGCTTTACACTTCCTACAGCGCCACCTAATGGATGCTTTTGCTGTC
Long Flanking Sequence:
CATCTATGATGACTTCAGGGTGAGTAAATTATGGGGTAATTTTAATTTTTGGGTGAACTACTCCTTTAAGATGGAAAAAAAAAGTCAGTGTGTGTTCAATCAAATTTTATTTATTTTAAAAGGTTTTTGGCCCCAATAACAGTTCATACTAGCGTATATGTGTAAAGCCCCGAGGGTGCTTTGGGTTTTAGAAGAAATCAATAAATTACAAATAATTTATTGAAATCTTTGTCAATAATATGGAGTCATGAAAGTGTAGTCTGATTTAATATTTTAAATTGTATTTACCATTTAAAATTCAAATGACAATCAGTTGGTAGCCAGCACTGTCAGCTGACCTTTGGCTCATGTTTATCTCTGTCTCATTGTCACAGGCGTTCTCTTCAGTATAGAGGTGATGGGGACTCATTATTCAGTCAGCGATTATTGCCCCTGCTTCTTTGCAGCGGCGTGCGGCGCCATCACCTTCAGGCTGCTTTCTGTCTGTATTGGAGATCAAG[G/A]TAAGAGCTTTACACTTCCTACAGCGCCACCTAATGGATGCTTTTGCTGTCTTTGCAGTAATCTCATTTACCGCTGTGCTTTTAGATTGCATTAGGGGATGCTATGAATTGACATTATTGAATTTAGATATGATTACACAGCCTGAAGGATATACGAGAGAAATTATTCAATACTTATTTAATCTCTTTCCGCAGACACAATCCAAGCCCTGTTTAAGACCAGCTTTTCTACTGATCTGCCTTTTCAGCCTTTTGAAATAATAATTTTTGCTCTGCTTGGGTAAGCTTGTGGTTAAGAGATTGGCAACAGACAGTGAAAAGTTAAATACAACTTACTCATATCTGTAACCTTATGGGTATTTATGAAAGAGTAACTGTTCTAATGGTTTTTTTCTCTCTCTCTCTGATTCAGGCTGTTTTGCAGTATTCTCAGCTGTATTTACTTACTCTGTCATCGCTGGGCTCTGCGTTTTGTCAAAACAAACAAACCCATCAGCACAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa37700
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000029974 Nonsense 530 693 15 20
Genomic Location (Zv9):
Chromosome 23 (position 24573238)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 24359612
GRCz11 23 24286153
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGTTCCCGCTCTGGTGGCGACGCTCGTGTCCAATGCTGTGGCTCGGGCT[A/T]AACACAGGCCGTCTTTCTATGATGGCATATCGCTTATTAAACGGCTCCCG
Long Flanking Sequence:
AGGCGATTTGCTTTGTGTCCTCGTAATTTATAACTGTTTATAAACAGCTCATAACGTTAGCTAAGTTTTTTTTACATTCAAAATTTGGATTTCCGGGGTGTGGTAGGGCCATAGGCTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTATATATATATGTATATGTATATGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTATATATTTATTTTTTTATTTTTTTATTTTTTAACTATAACATACGCCTACGGAGAGTCATAAATCTCAAAAACCAACCTGTGTGTGTTTTCAGGAGCGGCTGCTTTCTCCGGGGCCGTGACACACACACTTTCTCCTGCCCTGCTGGCGGTGGAGATGACCGGTCAGTGTTCCTATGCTGTTCCCGCTCTGGTGGCGACGCTCGTGTCCAATGCTGTGGCTCGGGCT[A/T]AACACAGGCCGTCTTTCTATGATGGCATATCGCTTATTAAACGGCTCCCGCACCTGCCGTCTCTAATCCGCGCATGTCCGAAGTGAGTAAAGCGTCGATCAATCATCTGCCTTCAGGCGCCGGTGGAAATTAAACTGCATTTTTCTTGAGGTGACACTGCCTCATAGTGCTTTCTGCCATTCATGATTCTGAGGGGAGACATGGTTTGAAATCAGAGTTAATCATAGGCTGTTTTATGTTCGTAAGAGATACTGTGACTCTTTCATTGTGGCGATGTCACTGCCATTGCATTCATATCGCAATACATGTAGCAGAAAGACCGCAGTTAAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGCATTTTCACATGGTTTAATAGCATTCTTTGGGAAATAAATCTTGGATTAGGGCAGATTATGGTGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa1792
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000029974 Essential Splice Site 682 693 20 20
Genomic Location (Zv9):
Chromosome 23 (position 24578539)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 24365115
GRCz11 23 24291656
KASP Assay ID:
554-1784.1 (used for ordering genotyping assays)
KASP Sequence:
AACACAGAGCTCATACATTACAATTCATTATAAAATCTGATTTTTCTTCC[A/G]GATGAAAAAAATTATTGAAGAGATGGCAAAGGAGGTCTGATGAATAAAGG
Long Flanking Sequence:
TATTTTAATTTCTGTTAGTATTACTGAATGGATTTAGCTAAGAAAGTTGCACCTGGAAGCTTCTCTGCATCACTAAATCTTCTTGCAGGATTCATGTAAACAGCTTGAAGAAGTGTGTTGTGTTCAGCCTGTGCGTCTTCATCTGACTCCTGACAGCACAGTAAAGCAGGTGTGCAGTGAGAATCAGCTTACCACTATTATGTTTCCTTCACATTATCTCCATGTTTTGTTCCGGTTTGCCTCGACATGATGAGTGCTTGTGTGTGTGTGTGTGCGTGTTCTGTCAGGCTCATTGCATCATGAGCATCACGGGTGAGCAGCGTCTGTTTATAACAGAGAGTGGGCGACTGTGTGGCGTCATCACATGGAAAGAGGTGACAAGAGCAGCCTGCAAGAACAAACATAAACACATCCACACACACATCTATACTCCAATCAAATACACCAATGAACACAGAGCTCATACATTACAATTCATTATAAAATCTGATTTTTCTTCC[A/G]GATGAAAAAAATTATTGAAGAGATGGCAAAGGAGGTCTGATGAATAAAGGGTGCATCAATTTGCGCTTGTCATTTTAATTCTATAAGTTGTTTACTGAAAATAAAAGTCAAACCTTCTGAAATGGCCAGTTTTATAATCAGAATTGTGAATGGTTTCCAGCCTGTCCAGTTCTCTTTGTTTGTTTAGTACTTTCTCTCATGTTATTTTGTGGATGAATTGGATTCCTTGTGGACTATTCACTTATTTTAAATTAAAATAAAGTTAAAAGCTACATTTAGATCCTCTTGGCGAATCCTTATTTTACCTCATTGTAGCGTACAAGTACACCCACAGGCCACTTTACTAGGTACACCTTACTAGTACTGGGTTGGACCCCCTTCAGAACTGCCTAGATCCTTCATAGCACAGATTCAACAAGGTACTGGAATTATTCCTCAGAGATTTTGGTCCATATTGACATGATAGCAGCATGTAATTGCTGCACAACCATGATGTGAAT
Associated Phenotype:
Normal
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037		 whole organism
ZFA:0001094		 quality
PATO:0000001		 normal
PATO:0000461