ZMP
sdcbp2
Ensembl ID:
ZFIN ID:
Description:
syntenin-1 [Source:RefSeq peptide;Acc:NP_997856]
Human Orthologue:
SDCBP2
Human Description:
syndecan binding protein (syntenin) 2 [Source:HGNC Symbol;Acc:15756]
Mouse Orthologue:
Sdcbp2
Mouse Description:
syndecan binding protein (syntenin) 2 Gene [Source:MGI Symbol;Acc:MGI:2385156]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa37652 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa37651 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa37652
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000020810 | Essential Splice Site | None | 299 | 1 | 9 |
| ENSDART00000136496 | None | None | 267 | None | 7 |
Genomic Location (Zv9):
Chromosome 23 (position 16852708)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 23 | 16755647 |
| GRCz11 | 23 | 16681990 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CATCACATTAAACCCATTTCTTCAGAAGTCGCTTGTTTGAAAGCAGAAAG[G/T]TAAGACGCGATGATCTTTAGTATAGATGTTGTTATTTTAGTTGTCGTTGT
Long Flanking Sequence:
TGTGTCAACTTGTGTCAAAAAAAAGTATTTCATGATCCAGCTGTTAAATAATATTGGAAAAACTGATACATTGATCAGTTTTTCCAATTTTACTGATACATTGATCAGGCCACCACTCAGTGCCTCAAGAATCATTTTTACAGTATCTGTTCATGGTAAACCATTAATAACTAGAGTAACTGTTACCATGGTAGTTGTTGGCAGTGAGGGTGGCTGAGCTAAAGTTATTGAGTAATAAATATATAAATAGAAGCTTCAGCCCTACCTTCTGTTAGACCAATAACGTCACAAAAAAGGCTGAGGATTGCAGGAAGTAAACAGCTACTAAACCACAGAAACTCAGTCACGCACTTTACTCTCGATCACCTCCCCTTCTCAGTGTTCACTTCTGCTCCAACCTAAAGAGGAAAGGGTCCCGTTTACTGTGCTCGGCTTGTTTACATTCCTTCTCATCACATTAAACCCATTTCTTCAGAAGTCGCTTGTTTGAAAGCAGAAAG[G/T]TAAGACGCGATGATCTTTAGTATAGATGTTGTTATTTTAGTTGTCGTTGTGAGCGATTTTATTTTATACAGTCAGGTAACGTTATGTGGCTAACCGAAGCTAAACTTAACCAGGCTGCTGCTAACACACACAGACACACACACTCGCACACACACGAAGAACAAAGACATGCTTGTGCTAACTTCACCTGATTCGTCCTTCAGTTATATTTTGTTTATTTTATTTAGATGCTATTTTTGTTACACATCACGTGGTCATTAATTAAGGAAAGGGAAATGTAACTTTATTCGTGAAATTAGCATTGTTATGCGGTTGCTAACGGAGTTACCGTGACTAGCTCGAGAGCTAAACACAACACAAACAGATAAAAATGCTTTAAATCTGTTCACTTTACGGTGAAAAGCAGATTTATAATACCTTGCTTTTTGTTTTAAACCCGTTGGCAGTCGATTTTCGCTGTTGTTTATGTTTTGGGAATTTTAATGCAGAATATATTTACA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa37651
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000020810 | Nonsense | 185 | 299 | 6 | 9 |
| ENSDART00000136496 | Nonsense | 185 | 267 | 5 | 7 |
Genomic Location (Zv9):
Chromosome 23 (position 16825102)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 23 | 16728041 |
| GRCz11 | 23 | 16654384 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGGCTGGAATTCAGATAAGGCCCATAAAGCTCTGAAGGCAGCAGCAGAA[C/T]AGCGCATCGAGCTCATCGTTCGAGACAGGTCAGTCCTTTCTGACTGTAGT
Long Flanking Sequence:
ATCTGTTGATTTTATCTTGAAGGTAAAGGTTACCCAAAATAAACATTCTGTCATCATTTACCCACCCTTCATTTATTCAAACTCAATTTGAGTTTCTTTTTTCTTTTAAACACAGAAGTATTTTGAAAAATGCTGGTTGCTGGTCGCTTCCATAGAATTTTTTTTTTCTACCGTGGCAGTCAATGGTTATAGATTTTCAATTTCCGAGGAACTGTATGAAATAAATCAGAGATTGGTGCATCATTATTACCCCCATCACTCTCATTGTCAGCATACTGTATGCTTCATTGTTGTCATCATCAGCAGCAGGTGATATGGTTATCTTTCATGCGTGTCATTTCCTGTTGGTGTAGGGAGTGTTTGTGCAGCTGGTGCAAGCCAACTCTCCAGCGGCACTGGCTGGTCTGCGTTTTGGAGATCAGGTTCTGCAGATTAACGGGCAGAACGTTGCTGGCTGGAATTCAGATAAGGCCCATAAAGCTCTGAAGGCAGCAGCAGAA[C/T]AGCGCATCGAGCTCATCGTTCGAGACAGGTCAGTCCTTTCTGACTGTAGTGCAAATACACTGCTTTTTTTCTTTGAGGTCAGTCCCATATTCTCGAGACTCAATCTGGTTAAGTGTAATATAGCTTTAAATGATAAAAGAGAGTCAAGCAGTTTGTCAGGCATTTTTTGATTAGACACCTGAATAAAAATATTCTATTTAATGATCACAGAGTAGCCCCAAAATACTGATTCATTGTCATTTTAAATGTTTGTACTTTGCCACTATCATTTAAAACACTGAATTTAAGCCGTTTTAAAATAATTTGATATAAAATAAAAGCTATTATAAGAACTTAGTCTATTATACTGCATATTTTAATATGTACGGCAGGGTGTTTTGTTTTGCCATTCATATTTAAAACTTAAAAGTGGACACATTTACATATGCATTCTATAAATAAAATCATTTGTGGTTGTAATTTGATGCAGATACCAACATATTCAAATTAAATGTAATTAA
Associated Phenotype:
Not determined