ZMP
phf20b
Ensembl ID:
ZFIN ID:
Description:
PHD finger protein 20, b [Source:RefSeq peptide;Acc:NP_001004114]
Human Orthologue:
PHF20
Human Description:
PHD finger protein 20 [Source:HGNC Symbol;Acc:16098]
Mouse Orthologue:
Phf20
Mouse Description:
PHD finger protein 20 Gene [Source:MGI Symbol;Acc:MGI:2444148]
Alleles
There are 9 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa13159 | Nonsense | Available for shipment | Available now |
sa37647 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa37646 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa17914 | Nonsense | Available for shipment | Available now |
sa43928 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
sa14382 | Nonsense | Available for shipment | Available now |
sa15420 | Nonsense | Available for shipment | Available now |
sa37645 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa13159
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000056570 | Nonsense | 54 | 986 | 3 | 18 |
ENSDART00000121468 | Nonsense | 54 | 1030 | 2 | 18 |
The following transcripts of ENSDARG00000038737 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 23 (position 15136167)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 23 | 15269046 |
GRCz11 | 23 | 15025123 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TATGAAGATGAGAAAGTTCTGATCCACTACAGACAGTGGAGTCACCGCTA[T/A]GACGAGTGGTTCGACTGGAGCAGTCCGTACCTCAGACCSGTRGAGCGAAT
Long Flanking Sequence:
TATGCCTGTCTGTTGTAAAAAACGTAATGACAAAAAATACTAATTAGTGCATCTCTTTCTTACTTCCGTGTGAAGCCATGCTGCCGTTGTACATGGTGTATTCTGAGAAATTTTCTTACCCCTTAGTTGTAAGTGTGGTCCTGAAACATCTTCATTTCAATGGGCTATCTAGCCATTCCCTTAAGCCCTATGCCTTCAAGCTAAAGGGAATTGAGACACCCCTACCCCTTTATGCAAACGCCCCTTCATTACTCTACACGATGAATGTGTAGAGTAATTCTCTTTGTGAACGACTAAGCTTTGTTACTGCAGATCAAATACATACATTTCATATCAAAGCATCATATGGTCTCTTTAAAAGCAAAGGTATATGGCAGATCTTTTCCGATCTGAAGTGGCTCACTGGTGTTTTGTATTGACAGGTACGCAGCCAACATAGAAAAGATCGACTATGAAGATGAGAAAGTTCTGATCCACTACAGACAGTGGAGTCACCGCTA[T/A]GACGAGTGGTTCGACTGGAGCAGTCCGTACCTCAGACCCGTGGAGCGAATCCAGCTGAGGAAACAGGGGCTGAATGAACGACAGTGCGCTTCAGTGAGTACTTCCAGTCAGACCGTGCTGACTCATTCAGAGTCCGCATGGCCGAAGTCACACTCTTACTCATAAATGCTGCAAAATTACATTTAGATCGGTTTCTTTTCCCAGGGTTTTCAGGTCAACCAGAAAGTGCTAGCCAGCTGGTCTGACTGTCGCTACTACCCTGCTAAGATCCTGTCTCGAGACAAAGATGGTGCGTATTCATGACCTTCACAGTACCACATCTGGTTCTACAGGGTCCAGGTGCTGGATTTGTTTGTTTTTACAGAAAATAGATATTGTATGTTATTTATTTTATTTTATTCATTAAAACAAAACATATAGAGTCGAGGGCAAAATATTTTGCTCTCCTATGCAATATTTATTATTTTTCAAATATTTCTTAAGTGATATTTAAGGGTTTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa37647
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000056570 | Nonsense | 70 | 986 | 3 | 18 |
ENSDART00000121468 | Nonsense | 70 | 1030 | 2 | 18 |
The following transcripts of ENSDARG00000038737 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 23 (position 15136121)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 23 | 15269000 |
GRCz11 | 23 | 15025077 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCTATGACGAGTGGTTCGACTGGAGCAGTCCGTACCTCAGACCCGTGGAG[C/T]GAATCCAGCTGAGGAAACAGGGGCTGAATGAACGACAGTGCGCTTCAGTG
Long Flanking Sequence:
GTGCATCTCTTTCTTACTTCCGTGTGAAGCCATGCTGCCGTTGTACATGGTGTATTCTGAGAAATTTTCTTACCCCTTAGTTGTAAGTGTGGTCCTGAAACATCTTCATTTCAATGGGCTATCTAGCCATTCCCTTAAGCCCTATGCCTTCAAGCTAAAGGGAATTGAGACACCCCTACCCCTTTATGCAAACGCCCCTTCATTACTCTACACGATGAATGTGTAGAGTAATTCTCTTTGTGAACGACTAAGCTTTGTTACTGCAGATCAAATACATACATTTCATATCAAAGCATCATATGGTCTCTTTAAAAGCAAAGGTATATGGCAGATCTTTTCCGATCTGAAGTGGCTCACTGGTGTTTTGTATTGACAGGTACGCAGCCAACATAGAAAAGATCGACTATGAAGATGAGAAAGTTCTGATCCACTACAGACAGTGGAGTCACCGCTATGACGAGTGGTTCGACTGGAGCAGTCCGTACCTCAGACCCGTGGAG[C/T]GAATCCAGCTGAGGAAACAGGGGCTGAATGAACGACAGTGCGCTTCAGTGAGTACTTCCAGTCAGACCGTGCTGACTCATTCAGAGTCCGCATGGCCGAAGTCACACTCTTACTCATAAATGCTGCAAAATTACATTTAGATCGGTTTCTTTTCCCAGGGTTTTCAGGTCAACCAGAAAGTGCTAGCCAGCTGGTCTGACTGTCGCTACTACCCTGCTAAGATCCTGTCTCGAGACAAAGATGGTGCGTATTCATGACCTTCACAGTACCACATCTGGTTCTACAGGGTCCAGGTGCTGGATTTGTTTGTTTTTACAGAAAATAGATATTGTATGTTATTTATTTTATTTTATTCATTAAAACAAAACATATAGAGTCGAGGGCAAAATATTTTGCTCTCCTATGCAATATTTATTATTTTTCAAATATTTCTTAAGTGATATTTAAGGGTTTATGGGAAAGTTCCCAGAATTTCGGATATTTTTTCTTCTGGAGAAGAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa37646
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000056570 | Nonsense | 160 | 986 | 6 | 18 |
ENSDART00000121468 | Nonsense | 160 | 1030 | 5 | 18 |
The following transcripts of ENSDARG00000038737 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 23 (position 15133368)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 23 | 15266247 |
GRCz11 | 23 | 15022324 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAGGAGCAATCAGCAAGCTCGAAAGCGTGCCGATCAGAACGAAAAAGAAT[T/A]GAAACCCAAGGAGAATGGAAACAGCCGGCACAACAGCTCGAGACACAGCG
Long Flanking Sequence:
ATATTTCAATGTATACTAAAATTTGTTAGATATATTTAACACTGTTAAACATAATCTTTTGCAAAGCAACAAAATAAATTCATATTTCTGCTCTTCGTTAGAATGTATTGATGCCAAAATTCACATGACTTATTAACATTTTTTAATATTAAAATTGAATTCAGCTAATTTAACGTTAATGGTGATAATTCCGATCATTTTCATAAAATTATATTTTATGCACCCAACTTTCCAGTAGTTTTGAGCTGCGTTTTTTTATTTTTTATTTTTTTTATGATGTTCTAGATTTCTACACAGTGAAATTTTTTGATGGGATCATCAAGACAGTGAAGGGAATTAAAGTCAAGCCGTTCCGTAAACAGGTAAAAAGTAATTCCCTTATCTGTAATAACCAGGCCATTCATTTAAACAACGTTAATTAGTGTGTTTTGATCTACAGAGCTCTGATGGAAGGAGCAATCAGCAAGCTCGAAAGCGTGCCGATCAGAACGAAAAAGAAT[T/A]GAAACCCAAGGAGAATGGAAACAGCCGGCACAACAGCTCGAGACACAGCGTATCAGACCACGATGGAGAGAGCGAATCAGAGGCGGACGAAGACACCACAGTGATGGATGAGTCCACAGACCTCCAGAACGGCGGAGAGAAAGAAAGCACAGAAACGAAGATGGTAAACGATTCAGAGGTGAGTTCTGCTGAGCACCAGCCCAGTGAAGACCAGAACCAGCCCAGTGAAGACAAGACCGAAAACCTGGAGAATGGAAATGTAGAGATTAAAATAGAGGAGGAGGAAGAAGAAGAGATGGATGGAGGACAGGAGGAGGCTAAAGTACTTCATAATGGCATTGACAAGAACGATGAGCACAAGGGCGAAGCATCGGACGAAAGTCCTAGTTTGCCCAAGAGGACACGGAGCAGGACGGCAGATGGTGAGTTTGGTTTGGAGGAACATGCTGGTGTTAGATCTGAATTTTTGATTTGATTATGATTCAGACCCAACAGTTTCA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa17914
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000056570 | Nonsense | 233 | 986 | 6 | 18 |
ENSDART00000121468 | Nonsense | 233 | 1030 | 5 | 18 |
The following transcripts of ENSDARG00000038737 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 23 (position 15133150)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 23 | 15266029 |
GRCz11 | 23 | 15022106 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACGATTCAGAGGTGAGTTCTGCTGAGCACCAGCCCAGTGAAGACCAGAAC[C/T]AGCCCAGTGAAGACAAGACCGAAAACCTGGAGAATRGAAATGTAGAGATT
Long Flanking Sequence:
TGCACCCAACTTTCCAGTAGTTTTGAGCTGCGTTTTTTTATTTTTTATTTTTTTTATGATGTTCTAGATTTCTACACAGTGAAATTTTTTGATGGGATCATCAAGACAGTGAAGGGAATTAAAGTCAAGCCGTTCCGTAAACAGGTAAAAAGTAATTCCCTTATCTGTAATAACCAGGCCATTCATTTAAACAACGTTAATTAGTGTGTTTTGATCTACAGAGCTCTGATGGAAGGAGCAATCAGCAAGCTCGAAAGCGTGCCGATCAGAACGAAAAAGAATTGAAACCCAAGGAGAATGGAAACAGCCGGCACAACAGCTCGAGACACAGCGTATCAGACCACGATGGAGAGAGCGAATCAGAGGCGGACGAAGACACCACAGTGATGGATGAGTCCACAGACCTCCAGAACGGCGGAGAGAAAGAAAGCACAGAAACGAAGATGGTAAACGATTCAGAGGTGAGTTCTGCTGAGCACCAGCCCAGTGAAGACCAGAAC[C/T]AGCCCAGTGAAGACAAGACCGAAAACCTGGAGAATGGAAATGTAGAGATTAAAATAGAGGAGGAGGAAGAAGAAGAGATGGATGGAGGACAGGAGGAGGCTAAAGTACTTCATAATGGCATTGACAAGAACGATGAGCACAAGGGCGAAGCATCGGACGAAAGTCCTAGTTTGCCCAAGAGGACACGGAGCAGGACGGCAGATGGTGAGTTTGGTTTGGAGGAACATGCTGGTGTTAGATCTGAATTTTTGATTTGATTATGATTCAGACCCAACAGTTTCAACCTCTCTCACGCGCCAACAGATAGCAGTTCATAAGTAGCAAGTAGAGAGGGAGACAATATTAGTGGATGAGACGGTCCACACAAATAAAAGCTAAATGAGAGGTTTTGTAATGATCAATAAGATATTAATAAGAACACTCCACATTATTATTATTATTATTATTATCATTTTGGAAATAGGTTCATTTTACAACTCCCCTAGAGTTTAACAGTTAAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa43928
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000056570 | Essential Splice Site | 301 | 986 | 6 | 18 |
ENSDART00000121468 | Essential Splice Site | 301 | 1030 | 5 | 18 |
The following transcripts of ENSDARG00000038737 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 23 (position 15132944)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 23 | 15265823 |
GRCz11 | 23 | 15021900 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GACGAAAGTCCTAGTTTGCCCAAGAGGACACGGAGCAGGACGGCAGATGG[T/A]GAGTTTGGTTTGGAGGAACATGCTGGTGTTAGATCTGAATTTTTGATTTG
Long Flanking Sequence:
TGTTTTGATCTACAGAGCTCTGATGGAAGGAGCAATCAGCAAGCTCGAAAGCGTGCCGATCAGAACGAAAAAGAATTGAAACCCAAGGAGAATGGAAACAGCCGGCACAACAGCTCGAGACACAGCGTATCAGACCACGATGGAGAGAGCGAATCAGAGGCGGACGAAGACACCACAGTGATGGATGAGTCCACAGACCTCCAGAACGGCGGAGAGAAAGAAAGCACAGAAACGAAGATGGTAAACGATTCAGAGGTGAGTTCTGCTGAGCACCAGCCCAGTGAAGACCAGAACCAGCCCAGTGAAGACAAGACCGAAAACCTGGAGAATGGAAATGTAGAGATTAAAATAGAGGAGGAGGAAGAAGAAGAGATGGATGGAGGACAGGAGGAGGCTAAAGTACTTCATAATGGCATTGACAAGAACGATGAGCACAAGGGCGAAGCATCGGACGAAAGTCCTAGTTTGCCCAAGAGGACACGGAGCAGGACGGCAGATGG[T/A]GAGTTTGGTTTGGAGGAACATGCTGGTGTTAGATCTGAATTTTTGATTTGATTATGATTCAGACCCAACAGTTTCAACCTCTCTCACGCGCCAACAGATAGCAGTTCATAAGTAGCAAGTAGAGAGGGAGACAATATTAGTGGATGAGACGGTCCACACAAATAAAAGCTAAATGAGAGGTTTTGTAATGATCAATAAGATATTAATAAGAACACTCCACATTATTATTATTATTATTATTATCATTTTGGAAATAGGTTCATTTTACAACTCCCCTAGAGTTTAACAGTTAAGTTTCATCATTTTAGAATCCATTCAGCCGATCTTCAGTTCTGCACTTTTAACTTAGGTTACCACAACTCATTGAACCGGATTAAACCATTAGCATCTCACTAAGAAATGGAGCCCAAAGAGTTTTGAACGATGAACCTGAAATGCCTGGTTTTACACCACAATAATTCATTAGTATTTAAAAAAAAACACTCCACATTATTATTTTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa14382
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000056570 | Nonsense | 580 | 986 | 13 | 18 |
ENSDART00000121468 | Nonsense | 624 | 1030 | 13 | 18 |
The following transcripts of ENSDARG00000038737 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 23 (position 15117767)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 23 | 15250646 |
GRCz11 | 23 | 15006723 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GAGTGATGTGTTGTTGTTGTGTCCTCCAGGTGAAGACAGCAGCAGTGATT[T/A]GTCCTCGGACAGTCCAGTATGGAGTGAGGACGAGTCTGACACTGAGCTGG
Long Flanking Sequence:
ATGGACAAAAGTTGTGGAAACAGTGTGCAATAAACTTTAACTGAAAAAATAGTTTGTTTTTGTAAACTTCTATTAGACGATTTGCTTCAACATTTGGAGTAGCTTTCCTTTTGTTGACGTCAACAGCTGATCTTCTGATGCTAACCTAAGGGTTTCCATAGCAACTGCATATTAATCCCCTTTCTTACCATTACCGTTGCTATGAGGGAATGATACGCCAAAAAAGCCTCTTCATTTCAGTAGGAAGTACATCAACATGCTGAAATAAAAGTCTCAGCAACTTCCAGGTCATGCTGACTTTATTGTATGATACGACTAAAAAGTGGTCAAAACTATTGAGATAAAAATGTTCTCAATTGATAAGAGTAGATGCTTGAACCTGGAAACCGTATCTTGTACGGCTCAACTTAGGAAGCAGGATATAAAAAAAGAGCTGAAATCTTCTGCTGAGAGTGATGTGTTGTTGTTGTGTCCTCCAGGTGAAGACAGCAGCAGTGATT[T/A]GTCCTCGGACAGTCCAGTATGGAGTGAGGACGAGTCTGACACTGAGCTGGATCTGAACGTCCCCCTCTCGGAGCAGGGGGTGGAAACAGTCACTCACAGCTCTGAGATCGTACGCTGTATTTGTGAAGTGCAGGAGGAGAACGACTTCATGATACAGGTCAACTACCACCCTCTGAATCTGCTTTTGACTTTCTTTTTTCGTTCGTTATGCTTTTAATATCATTTTGAAGAGTGTTTGTTTTTTTCTGTGAATTTCTTTTTCTAGTTTTTACATTTATTATGGCAACTGTTATGTTGAACATTAAACATACAGTACTATGAAACAATATTTTGAACTTTCACACATTTTAACATATCGCAATGAAATTTTTTGAAATGTATTCATAATATTGTTTCATAATACTGTTTAAAGACAAATCTGAGTTTGCTTTGCCTAAATAAATGTATCAACTGTGCACTATATTAATATAAGCTACATTAGTAATAGTTGTAATAATAAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa15420
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000056570 | Nonsense | 648 | 986 | 14 | 18 |
ENSDART00000121468 | Nonsense | 692 | 1030 | 14 | 18 |
The following transcripts of ENSDARG00000038737 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 23 (position 15114580)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 23 | 15247459 |
GRCz11 | 23 | 15003536 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CAGTGTGACGAGTGTCTGTGCTGGCAGCATGGGACRTGTATGGGTCTCTA[T/A]GAGGACAGTGTGCCAGACAGTTACAGCTGCTATATCTGCAGAGACCCACC
Long Flanking Sequence:
TTTTTTTTATTTATCTCTGTAAAAGCTAAATACAAACAAAAAGTGAACATTGAACAAAAAGTGAACATTTAATTGTTCTATACATTTTTATTTAAAAAAAAGTAATAAGAGCCTGGAGGTATTATAGACTTTGCTAATTCAGTTTGCAGACATTTGTAGGTACAGACATCTATTGTGTGCATTCTTGGCAGTTTTTCCTGTCTTTTTAATATTGTCCATATCAATATCGGAATTATATCATATTGACCGAAATAAAGAAATATATTGTAATATAATTTTTTGCCATATCGTCCAGCCCTAATCTCATGATTATTATTATTATTATTTTAAGTGTTCCAGGAAAGATTTGTTTAGTATATAAACTATTGTTTAATGTAAAGTATATAAACTCCATTTCATTTAGTGATGATTAGTGATGGTCTTGGAGATTAAAAGATGTTTTGCTCTCTGCAGTGTGACGAGTGTCTGTGCTGGCAGCATGGGACATGTATGGGTCTCTA[T/A]GAGGACAGTGTGCCAGACAGTTACAGCTGCTATATCTGCAGAGACCCACCAGGTGAGAGACTTGATCTATCTCACTTTAGCATATATGATCTTTTTCCACCTTTTTCTGTATTAAACAGCTGCATTTTAAAATATTGAGTTGAAATTTTGGTTTAAGGAACTCCCATTCAAAACAACTGAAATCACTTCATATAATCCATATACAGTGGGGACTGTGCTTTATTTTTATTTGTCACGAAAATAAGGTTACACTTCGTATTTTAATGTGACATTAATATCACAAGTATATCTGTGGCCAAAGTCCTGTCAAGTTCACTGTGTTTTGTTCCTCCAGATTGTAGGGATAGTATACAGTTCAACCCAAAGAATGACCAGTCTGGTAGATGAAGAAGAGCCGGAGTCAGAGATTTAAATAAATAAATCAAGTTTACTGAAGATCGTTTGCAGTTTCATCCGCAGAAGCCAGCTTCAACATTCGCAATGAGTTCCTAGGCCACTCT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa37645
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000056570 | Nonsense | 669 | 986 | 15 | 18 |
ENSDART00000121468 | Nonsense | 713 | 1030 | 15 | 18 |
The following transcripts of ENSDARG00000038737 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 23 (position 15112440)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 23 | 15245319 |
GRCz11 | 23 | 15001396 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCAGTTTTGTGATGTAGAAGTGTGTGTGTCTGTATGTGCAGCTCAGAGG[C/T]AGAGTCAGAGGTACTGGTACGATAAAGACTGGCTGAGCAGTGGACACATG
Long Flanking Sequence:
TGGTGTATTATATTTTATGCATAAACACTTCTCTACAAAATCATCCTAATCAAATACCAAAATTATGATTTTGTTTTGAACTTATCTGGTGAAATTATACTTGATTTTGAAATATTTATCGCAGGACAATCAAATATAGCAATGAGTTTTTTTGTTGTTGTTTTTTTCCCAATATCCTGCGATGAAAAGACTCATCTTGAGTTTTGAGTTTTTGGGTTTATTAAGGGTCAACTGAAAGTTGTTTCTAGAGGTTATATATATATATATTGAATGGATGAACTATGAGGCAAATAATGCCATTGTAGCCAGTTCTATAAAAAAAATTCACAGGTTTTTAACAGTTTAATAAAAGTTACTCTCATAATTCAAGCAAAACATCATGAATCATAGGATAAGGGTGGATATTAGTTTGTCTGGATTGTGTATATTACCCTTTCTGTGGATCTTTTATTCAGTTTTGTGATGTAGAAGTGTGTGTGTCTGTATGTGCAGCTCAGAGG[C/T]AGAGTCAGAGGTACTGGTACGATAAAGACTGGCTGAGCAGTGGACACATGTACGGCTTGTCTTTTCTGGAAGAGAACTACTCTCACCAGAACAGTAAGAAGGTGACGGCAGCACATCAGCTTCTAGGAGACGTCCACCGAGTGTTTGAGGTCCTCAACGGCCTTCAGCTCAAGATGAGCATCCTACAGTGAGTTTTTCCACACAATTTCATTCTGGGCTTTTAGCATATTGGGTTATCATTTTTTCATGTTTCACACCACTCTTATTTAGCCTGTGGTTGTGTGGTAGCCAGTGTTGATGTTTTGGAATGCTAGGAATACTTTTGCTTTAATTAACTTTTGACTCCAAATGAATGAAATGGAGAGAGCAGTACTAAAAAATGACAAAAACCACAAATGCAAAAAGTTGCAAATTATTTGCATGAAAGGGAATAATATAAATAATACATTGAAATAAGTTGAAAGACATTTTTATTTGTCATTATGTTTGCAAAAAACTAC
Associated Phenotype:
Not determined