Busch Lab

ZMP

tcea2

Ensembl ID:
ENSDARG00000012927
ZFIN ID:
ZDB-GENE-040426-985
Description:
transcription elongation factor A protein 2 [Source:RefSeq peptide;Acc:NP_957280]
Human Orthologue:
TCEA2
Human Description:
transcription elongation factor A (SII), 2 [Source:HGNC Symbol;Acc:11614]
Mouse Orthologue:
Tcea2
Mouse Description:
transcription elongation factor A (SII), 2 Gene [Source:MGI Symbol;Acc:MGI:107368]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa6723 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa10105 Nonsense Available for shipment Available now
sa37617 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa6723
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000014222 Essential Splice Site 175 301 6 10
Genomic Location (Zv9):
Chromosome 23 (position 8833358)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 8791499
GRCz11 23 8726469
KASP Assay ID:
554-5461.1 (used for ordering genotyping assays)
KASP Sequence:
CAGACGATTGGAGCAGACTGTGAACACATGGCGGCACAGATCGAGGATTA[T/C]ATCCTTCACATCGAAAGCTAGTGTTGTAGGCCTGGYTGTAATGTTGAACT
Long Flanking Sequence:
AAAAATAAATAAATAAGAGGAACAAACAAGAGAAGCACACAAAATGTAAATTTTATTTTAACTGTTTAAGTTTAGAAATTCATTTGCAACCCCTCATTTGAATTTAGTGTAAACATATTATTCTTCTCTTCTAATAATGTTCAGTAATCAAGGAACTTTTGGTTTGTACAGATGTGTGCATTCATTCTAAGAGAAACAGCCTTTCAAAAAATGTTGCATGCGTTGTGTTCAGGTCATGCATAGAGCATTCCTAGGTGTCAAAGTTGTAGGTGTATGAAATTCTGTTATACGATATTATATATTGTGTCAAGAAAATGTAAAGATTTTTTCATTACGTTGCCGTTGTTGTTATTGTTGTTATTATTATTATTATTATTTTATTTATTTGTTTTTTATTATTATTTTTGCTTGCTTCAAGGAAATTTTGTGTGTATATTCTCAGGTGATCACCAGACGATTGGAGCAGACTGTGAACACATGGCGGCACAGATCGAGGATTA[T/C]ATCCTTCACATCGAAAGCTAGTGTTGTAGGCCTGGTTGTAATGTTGAACTCCATTTCCATTTGCATTTTGTCAGTAAACCCAGATCTGCTTAATCTCTAGAATGTGTTTTCAGATGGAACAACAATTACTTGTAGTCATAGTTCATTAGACAAAATCAAGTTCAAAATCATGCTGTAATTATCAATGAATTTCAGCTTAATGTAGTAAATGCTACACATTTAACGTTTAATACCACGTTTAATGTTTTTACACCACACTCACGTCATAACTTCAGTTTAAAAATAGCTCTTAAGTGTTCAAAATAAATTCTGTGAAATGATTAGATAGTTGTGTTTATAAGTCATGCTGAAGCAGTGATTGCAGTTAAAGCTTTTGTTTATAATGTAAGGCTATGGGAATTTCTTGGGTTTCTTCTTTGTGGGTATTTGGAGTTTCTGCAACATCTGGGGCCTCATGTATCAACGCTGCGTACGCACAAAAACTTTGCATACGCCAGGTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa10105
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000014222 Nonsense 175 301 7 10
Genomic Location (Zv9):
Chromosome 23 (position 8831402)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 8789543
GRCz11 23 8724513
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AATGTCAAATAATACAACTGTACTTCCTTGACTGGTCCCCTTGATGCACA[T/A]ATTTACCAGGAGTTCAAATCCACCGACATGAAGTACAAGACCAGAYTGAG
Long Flanking Sequence:
GATGTACAAAAGAATATGCGTGAGATTCGGCGTACGCAGTGTTTCATACATCTGAATTTTTTTCTGCGTACGCACATTTAAAATGTTTAAAAATGTTTATGTTTAAAACATTTAAAATGTTTTAGTAAGATTTCCACGCAAGTCTTCGTACATGAGGCCCCTGGTCTTTGGAGGAGATTTACTATTGATCATGGAGCTCTTGACAAATAGAATTTTAATTCATACCAGCTCTGTAATGTTTTTTTTTATGTCAGGATTCATAATTAGCATGCAAAATAGGCCAAATAATAATAGCTAACCAAACCATAACTTCTTAATAATAATAAATATGGCAATGTACTTTGTTACACTTTCCACTAAAGAAATTTAACACACTTTTCTGTCTGCAAAGTTAAATGAGAAATTATTTCAGCTTAAAATTGGCCTTCTTCAACAATGCCATTCTTGAACAATGTCAAATAATACAACTGTACTTCCTTGACTGGTCCCCTTGATGCACA[T/A]ATTTACCAGGAGTTCAAATCCACCGACATGAAGTACAAGACCAGACTGAGGAGTCGTATTTCCAACCTAAAGGACCAAAAGAACCCAGACTTGCGGCGGAATGTCCTGTGTGGAAACATCTCTCCAGAGCGCATCGCCAGCATGACTGCAGAGGTTCGTTTGGATTTGATTTTGGCTCAGAAACTGTTAAACGGCAGCCCTGTCTCTAGAGGTTGTGAAGTGTGTTTGTGTTAATTGCGTGTTTGGCAGGAGATGGCAAGCCCTGAGCTGAAGGAGATCAGGAAAGCGCTGACCAAGGAGTCCATTCGAGAGCATCAGCTCTCCAAAGTGGGCGGAACAGAGACGGACATGTTCGTCTGTGGAAAATGCAAGGGCAAGAACTGCACTTACACTCAGGTATGCGGTTACTGCAGCTTAAAACACTTTTTTTTACACAATGTTTATACCAGAGATGTTTATACTTGCTTCAATTATATAAACGACTATTAATTTGAGGAGTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa37617
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000014222 Nonsense 187 301 7 10
Genomic Location (Zv9):
Chromosome 23 (position 8831366)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 8789507
GRCz11 23 8724477
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCCCTTGATGCACATATTTACCAGGAGTTCAAATCCACCGACATGAAGTA[C/A]AAGACCAGACTGAGGAGTCGTATTTCCAACCTAAAGGACCAAAAGAACCC
Long Flanking Sequence:
CAGTGTTTCATACATCTGAATTTTTTTCTGCGTACGCACATTTAAAATGTTTAAAAATGTTTATGTTTAAAACATTTAAAATGTTTTAGTAAGATTTCCACGCAAGTCTTCGTACATGAGGCCCCTGGTCTTTGGAGGAGATTTACTATTGATCATGGAGCTCTTGACAAATAGAATTTTAATTCATACCAGCTCTGTAATGTTTTTTTTTATGTCAGGATTCATAATTAGCATGCAAAATAGGCCAAATAATAATAGCTAACCAAACCATAACTTCTTAATAATAATAAATATGGCAATGTACTTTGTTACACTTTCCACTAAAGAAATTTAACACACTTTTCTGTCTGCAAAGTTAAATGAGAAATTATTTCAGCTTAAAATTGGCCTTCTTCAACAATGCCATTCTTGAACAATGTCAAATAATACAACTGTACTTCCTTGACTGGTCCCCTTGATGCACATATTTACCAGGAGTTCAAATCCACCGACATGAAGTA[C/A]AAGACCAGACTGAGGAGTCGTATTTCCAACCTAAAGGACCAAAAGAACCCAGACTTGCGGCGGAATGTCCTGTGTGGAAACATCTCTCCAGAGCGCATCGCCAGCATGACTGCAGAGGTTCGTTTGGATTTGATTTTGGCTCAGAAACTGTTAAACGGCAGCCCTGTCTCTAGAGGTTGTGAAGTGTGTTTGTGTTAATTGCGTGTTTGGCAGGAGATGGCAAGCCCTGAGCTGAAGGAGATCAGGAAAGCGCTGACCAAGGAGTCCATTCGAGAGCATCAGCTCTCCAAAGTGGGCGGAACAGAGACGGACATGTTCGTCTGTGGAAAATGCAAGGGCAAGAACTGCACTTACACTCAGGTATGCGGTTACTGCAGCTTAAAACACTTTTTTTTACACAATGTTTATACCAGAGATGTTTATACTTGCTTCAATTATATAAACGACTATTAATTTGAGGAGTACACACAAGAATTTATACACTTAAAGAAATAATGTCA
Associated Phenotype:
Not determined