Busch Lab

ZMP

si:ch211-197i12.3

Ensembl ID:
ENSDARG00000040853
ZFIN ID:
ZDB-GENE-050208-765
Description:
Leucine-rich repeat protein SHOC-2 [Source:UniProtKB/Swiss-Prot;Acc:Q1L8Y7]
Human Orthologue:
SHOC2
Human Description:
soc-2 suppressor of clear homolog (C. elegans) [Source:HGNC Symbol;Acc:15454]
Mouse Orthologue:
Shoc2
Mouse Description:
soc-2 (suppressor of clear) homolog (C. elegans) Gene [Source:MGI Symbol;Acc:MGI:1927197]

Alleles

There is 1 allele of this gene:

Allele Name Consequence Status Availability
sa24200 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa24200
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000059882 Essential Splice Site 366 561 5 9
ENSDART00000125215 Essential Splice Site 366 561 4 8
Genomic Location (Zv9):
Chromosome 22 (position 32304348)
Other Location(s):
Assembly Chromosome Position
GRCz10 22 29665478
GRCz11 22 29614673
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTTTTGGCATTTTCTCTCGAGCAAAAGTGCTTAGCAAGCTCAATATGAAG[G/A]TGAGAGCACAAAAATTGTGGAGAGTGTAAAGTAAGGACACCAGCCTAAAG
Long Flanking Sequence:
GACAGCACCATTCTGAATAGATGATTCAATTTTGGGTGAACTATCAAAGTAGGATTTCTCACCTTCATTTACTGTTTCAGGTAACTTGGCAAGTATAAACCGTCTAGGTTTGAGGTATAACCGCCTATCAGCGATCCCTCGATCTTTAGCAAAGTGCAGAGAGCTGGAAGAGCTCAACCTTGAAAACAACAACATCTCGGTTTTACCAGAGGTAAGGGTTGCTTTTCCTCAGTCCAGCTGATAATTATTATCATGCTTGTATATATGTATATATGTGTGTATTACATTGGTCCTTGTCTGTTCCTAATCAGGGGCTTCTCTCCAGTCTGGTGAACCTGACAAGTCTGACGCTGGCGCGAAACTGTTTCCAGTCTTACCCAGTGGGCGGCCCGTCCCAGTTTTCCACCATCTATTCTCTCAACATGGAGCACAACCGTATCAACAAGATCCCTTTTGGCATTTTCTCTCGAGCAAAAGTGCTTAGCAAGCTCAATATGAAG[G/A]TGAGAGCACAAAAATTGTGGAGAGTGTAAAGTAAGGACACCAGCCTAAAGACTTAAGACTAGTGGCCTGTACCAGGATGCTGGCTGAACAAACTCTTAAATTAGGGGATTCATTTCTTGTTGACAAAACTAAACCTGTGCAATCACACTGTGTTGGTGTTATAATGCCGATCATCAACTTTCTCTTTTAACTTGGACTTTGACTCCAAGTTCATTGAGTGCATGCATATGAATATGGGACATTAATAGCAAGCAACCATTCACTTGCCTTGGAACAGAAAGATACTGTGACTGACTTCTCGCGAAATTAAAAGGTTTAAAAGTACAAAAAATTGTAAAAATGCGTATGCAGCAAGGTAAAAAAAACAGTCCATGAAGGAGGAAAGCTTTGTGCAAGTGAAGTTAGTAAGCATAGTGTATAATATGTACTGTGTAGGTATACAGAGACTCTTATCTACCCTCAAAAGGATTTTTGCTGCTTGTTTCAACTGCTTATTTAAA
Associated Phenotype:
Not determined