ZMP
si:ch211-250k18.6
Ensembl ID:
ZFIN ID:
Description:
Novel NACHT domain containing protein [Source:UniProtKB/TrEMBL;Acc:B0S8F7]
Human Orthologue:
NLRP6
Human Description:
NLR family, pyrin domain containing 6 [Source:HGNC Symbol;Acc:22944]
Mouse Orthologue:
Nlrp6
Mouse Description:
NLR family, pyrin domain containing 6 Gene [Source:MGI Symbol;Acc:MGI:2141990]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa37425 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa29720 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa39357 | Splice Site, Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa37425
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000139587 | Nonsense | 95 | 714 | 2 | 6 |
| ENSDART00000143041 | Nonsense | 174 | 519 | 3 | 3 |
Genomic Location (Zv9):
Chromosome 22 (position 9204266)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 22 | 9235342 |
| GRCz11 | 22 | 9265024 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAGCTCAAGAGATACAGGTTGAATGCAGACATTTGTTTAAAGCGTCTGAA[C/T]AAGACAAGCAGATCAGAACTGTCCTGACAAAAGGAGTCGCTGGCATCGGG
Long Flanking Sequence:
TCTGAAGAATGAGCTAGAAAAGTTTAAGAAAATATTACATGAAGAAAACACACACTACTTTGTAAAGGACTTTAATGAGAACAGGTGCAGAATAAAAGAAGCAGCTCTTGATATCACATTTTACTTCCTGAGAGAAATGAAGCAAGATGAAGCTGCTAATACTCTAGAAGGTGAGAGACTGTCAGATTATCACTTATAAATATAGGAGAGAAAGCAAACACAGTTATAGCAGTTTTTTGTTCCTGTGTTTAGATGAGCTGTTCTTCATTCATCAGCTGAAATGTGGCCTACAGAAGAAGTATCAGTGTGTATTTGAAGGAATTGCACAGCAAGGAGACTCCACACTCCTGAAGAACATCTACACAGATCTTTATATCACTCAGGGTGGCAGTGAACAGGTCAATAATGAACATGAGGTCAGACAGATTGAAGTTGCTTCCAGACGTCATAAAGCTCAAGAGATACAGGTTGAATGCAGACATTTGTTTAAAGCGTCTGAA[C/T]AAGACAAGCAGATCAGAACTGTCCTGACAAAAGGAGTCGCTGGCATCGGGAAATCAGTCTCTGTGCAAAAGTTTGTTCTGGATTGGGCTGAAGGAAAAGAAAATCAAGAGATCAGCTTCATATTTCCTCTTCCATTCAGAGAGATGAACTTACAGGAGAAAAAAAAACTCAGTTTGATGGAGCTTATAACTCAGTTTTTCCCAGAGACAAAAGGACTGAACCTTACAAGAAGGAATCGATTCAAAGTCCTGTTCATCCTTGATGGATTGGATGAATGTCGTCTTCCTCTGAACTTTGCTGGTAATGAGATGTGTTGTGATGTTTCGTCACCAGCCTCTCTGGATGTTCTCCTGACGAACCTCATCAAGGGAAATCTGCTTCCTTCTGCTCTCATCTGGATCACCAGCAGACCAGCAGCTGCCAGTAAGATTCCTCCTGACTGTATCGAGCGGCTGACAGAGATACGAGGATTCAATGATGCACAAAAGGAGGAGTACTTC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa29720
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000139587 | Nonsense | 335 | 714 | 4 | 6 |
| ENSDART00000143041 | Nonsense | 433 | 519 | 3 | 3 |
Genomic Location (Zv9):
Chromosome 22 (position 9205043)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 22 | 9236119 |
| GRCz11 | 22 | 9265801 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGACACAGCTGTACACACACTTTCTGCGCTTTCAGATCCAGCAGAGCAGA[C/T]GAAAGTATGATGGAGAATACACACCAGATGTGTCCTGGGATAAAGACGCC
Long Flanking Sequence:
GTCGTCTTCCTCTGAACTTTGCTGGTAATGAGATGTGTTGTGATGTTTCGTCACCAGCCTCTCTGGATGTTCTCCTGACGAACCTCATCAAGGGAAATCTGCTTCCTTCTGCTCTCATCTGGATCACCAGCAGACCAGCAGCTGCCAGTAAGATTCCTCCTGACTGTATCGAGCGGCTGACAGAGATACGAGGATTCAATGATGCACAAAAGGAGGAGTACTTCAGAAAAAGACTGACAGATGAGAATCAGGCCAAAGAAATCATTGATCATGTTAAACAATCAAAGAGTCTCTTCATCATGTGCCACATCCCAGTCTTCTGCTGGATTTCAGCCACTGTTCTCCAGAACATTTTACAGGAGAAGAGAAATAATGATGTGAAACACAATCAGGCTGATCACACCTCCAAAACACTGCAGGAATCAAACACTGAAGACACTCCCAAGACTCTGACACAGCTGTACACACACTTTCTGCGCTTTCAGATCCAGCAGAGCAGA[C/T]GAAAGTATGATGGAGAATACACACCAGATGTGTCCTGGGATAAAGACGCCATCCTTTCACTGGGAAAACTGGCATTTGATAATCTGCAAAGAAACAACCTGATCTTCTATGACACAGACCTGGAAGCCTGTGGTATTGACGTCTATAAGGCCTCAGTTTACTCAGGCATGTGTACCCAGATCTTTAAGAAGGAATCAGGGATTGTACTTGGTACCATGTACTGCTTTGTTCACTTGAGCATTCAAGAGTATTTTGCAGCCCTTTATGCACATCTGATTCTGGACATCAACAAGAAAAGTGTGTTTGATCAAGACTCTAAAAACAGAAATGAGTCCATGATTGATTTGCTGAAGACTGCAGTGGACAAGACACTTGAGAGTGACAATGGACACCTGGACCTTTTCCTTCGCTTCCTTCTCGGCTTGTCTCTCCAGTCCAATCGACGACTCTTACGAGGTCTGTTGACACAGCAAGAACACAATGACCAGAGCAAAGAGGAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa39357
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Splice Site, Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000139587 | Splice Site, Nonsense | 601 | 714 | 5 | 6 |
| ENSDART00000143041 | None | None | 519 | None | 3 |
Genomic Location (Zv9):
Chromosome 22 (position 9205917)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 22 | 9236993 |
| GRCz11 | 22 | 9266675 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTTGTATTTGTGCCACCTAATTCTGTGGTTGTTTTATTTCTCTTGTAGGT[T/A]AAATGATTGTAAGTTAACAGACAGAAGCTGTTCAACTCTGGCTGCAGGTC
Long Flanking Sequence:
TGAGAGTGACAATGGACACCTGGACCTTTTCCTTCGCTTCCTTCTCGGCTTGTCTCTCCAGTCCAATCGACGACTCTTACGAGGTCTGTTGACACAGCAAGAACACAATGACCAGAGCAAAGAGGAAATAGTTCAGTACATGAAGCAGAAGTTTGAAGCGAATCTTTCTCCAGAGAGATCCATCAATCTGTTCTACTGTCTGAATGAACTAAACGAACAAACTCTGGTGAAAGAGATTCAGACTCACCTTAGCAAAGGAAGTCTCTCATCTGCTGATCTTTCACCTGCCCAGTGGTCTGCTCTGGTATTTGTGTTGTTGACATCAGAGGAGGAGATGGAGGAGTTTGAGCTTCAGAAATTCAAGAAATCAGACGAGTGTCTCATCAGACTATCAGCAGTTGTCAAATCCAGCAGAAGAGCTCTGTAAGCAGTCAATATTAATAAAATTATGTTGTATTTGTGCCACCTAATTCTGTGGTTGTTTTATTTCTCTTGTAGGT[T/A]AAATGATTGTAAGTTAACAGACAGAAGCTGTTCAACTCTGGCTGCAGGTCTCATATCAGAAAACAGTCTGAAAGAGCTGAACATGAGCAATAATAATCTGCAGGATTCAGGAGTGAAGCAGCTCTGCACTGGACTGAAGAATATTAAGTGCGAGTTAGAAATCCTGAGGTACATTCTGTGATAATTGACATTTTGGTTTTAAACTTGAGCTCACATTAAACCGAAGATTTTAATATTCTTAAAATGCATTATGTACTGTTTTTATATGGCAGCATGCCATTTATATATAAGGGAAACGTGTCAATGTCCTCAAGGTTACACAGATGAATGAAGTCTCTGGCAACCATCACTGTTACTATGGTTATTGCTAATGTTTAAGGGAAGTGCATTTATTTTAAACTGATTAAAACTGATTGTATCTACCTAAATAATTAAATGATTTCATTTCTGCCAATTTAACAGACCATAGAATAAACAAAGTGTATTAATAGTTGTACGCT
Associated Phenotype:
Not determined