Busch Lab

ZMP

SETX

Ensembl ID:
ENSDARG00000022996
Description:
senataxin [Source:HGNC Symbol;Acc:445]
Human Orthologue:
SETX
Human Description:
senataxin [Source:HGNC Symbol;Acc:445]
Mouse Orthologue:
Setx
Mouse Description:
senataxin Gene [Source:MGI Symbol;Acc:MGI:2443480]

Alleles

There are 7 alleles of this gene:

Allele Name Consequence Status Availability
sa32326 Nonsense Available for shipment Available now
sa11606 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa32326
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000082314 Nonsense 151 2368 3 24
Genomic Location (Zv9):
Chromosome 21 (position 4229713)
Other Location(s):
Assembly Chromosome Position
GRCz10 21 3784371
GRCz11 21 3948990
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCACAGCTGATATGGTGGTTAGGGTCTTGTACAAGTTGCAGGATTGGCAG[C/T]AAACTTTGAGTTGGTCTGAGAAGTATCAGGGAACATATCTGCTTCTCGTT
Long Flanking Sequence:
TTTCTGTGTGGAGTTTGCATGTTCTCCCTGTGTTGGCGTGGGTTTCTTCTGGGTGCTCCAGTTTCCCCCACAGCCCAAAGACATGTGGTATAAGTTAATTGGTTGAACTATCTGTAAATGTGTATGGATGTTTTCCAGTACTGGGTTGCAGCTGAAATGGCATTCGCTGTGTGAAATGTGCAGGATAAGTTGGCGGTTCATTCCGCTGTGGTGACCCCTGATGAATAAAGAGACTAAGCCGAAAGAAAAGGAATGAATGAATAAATTGAATGATTTTTCTATGCCCTATTATCTGTATGGTAATCTATACGTTTGTGTAATGCTTGTTTAACAAGAAATCATTAATTAACTGTATATTAAATATTCATTACCAATGTTGTCATGGGTTTTAAATGCCTTATCAGCAGCATTCCTACATTTAAGTAACTATATAATATAAATATTTATTCTCCACAGCTGATATGGTGGTTAGGGTCTTGTACAAGTTGCAGGATTGGCAG[C/T]AAACTTTGAGTTGGTCTGAGAAGTATCAGGGAACATATCTGCTTCTCGTTCATCCCGATGAAAAGGTAACTCGGCAACAAAACCACATATTTTATGATAAACAGCCTCTTGTGTCTTAAATTATTATTTACATTTCTTTACTACGTGGTTCTCTTTCCTATCCAGGTGCGTCGCTGGGCAATTGATCTAGCAAAAACCTTAAAGAGTGTGGACCGGGATGCCTATTATGACCTTCGGGAGATCTTCGCTTGCATGTTTCAAATAATCGAGCTTGGAATATCTTTAGATTTACCAGATTTGGATCCTGGGTGTTATGCAAGCGGAAAAGTGCCCATGCTGCCCTCTCACCTCTATGATGCAAAGAACAAGAAGAACTACTGGCTAGGTCTGTTTATTACAGTTTTCTCCAGATCCTCTTTTCTTAATGGTCTTTCCATTGATCACTTCCTTCTGTTACTAAACTCTGAACAGATACACTGCATTTAAGTTTCTGTTCCCCC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa11606
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000082314 Nonsense 472 2368 8 24
Genomic Location (Zv9):
Chromosome 21 (position 4225983)
Other Location(s):
Assembly Chromosome Position
GRCz10 21 3788101
GRCz11 21 3952720
KASP Assay ID:
2261-5144.1 (used for ordering genotyping assays)
KASP Sequence:
AARCAAGCGTGTGTGATAAAGTGACTGAGCTCTTTGCTCGTATCTTTATT[C/T]AAATCGTTGAGCTACACTATACCGAAGGACAAATGGGAATACTTTCTCGC
Long Flanking Sequence:
GCCAGAATATGACGACAATGTCGTGACTTGCAGTCAGATGGTGTATGACTGTTATGCCTCGAAAAAACAAGGCCATGTAAGATTTCTTCCTAAATATTGTACTGCACCACAGTGTATTTGCTTTTATGCAGTAAACATTGACTGCATTGCTTTAATGCATATTAGGAATAAAGCTGAATATTCTCCTAATCTTCGTCTTGTAGGCACCTGGCTCATCCAACAGTGGTGTTGGCAGCAACTATGTGATTTATGACGATATGCAATCACTGGTCAGCGTGCTTAATTCAGAGATGGGCCAGAGCATGCGTGTATATGGATGCACTTTTCTGTGGTTCATCCCATTTGTTCGTTCCATAATGGAACTTCAAGAGCACAATGCTTCCTATATTAGTGAAATCATCCACTATCTTTGTGATAAGATCCGAGATAATCGGTACATGCTGACTGGACAAGCAAGCGTGTGTGATAAAGTGACTGAGCTCTTTGCTCGTATCTTTATT[C/T]AAATCGTTGAGCTACACTATACCGAAGGACAAATGGGAATACTTTCTCGCTGTCCCCCCAAGTGGGTTGAGGTGATTGTCATGTGCGTCGTCTTATGTGATGAACCTTATGGACCCCCAGACAGGATGGGTGGGATTCACAGTGTCAGTTCAACATCTTACAGTCTTGGCATTGTAGGAAGACCTACATCAGAATGTGGGAATGGAGCAATAATTAAAGGCTGTTTGACGCTTATTCGGCAGCTGCTTAAGGAAGGGAAAAGAAGATCTGACCCAGATGCGGCCATGTTTTTGAATTTGCTTAACAAGCAGCTGCGTGGTGATACCAACAAAAGGTGGAGTCTAACTTTTTCAAATTCTGCAAAGCTTCAGCAGTGTTTGAGGAAAATTGTGCAGCTGATGGCTGAAAGACCTGCTGTTCCACCCCGATCCGCACCATCTGTTGAGGCAGCTACAAATACTGTTGTTTCCAGAAATTCAGTATCAATCTGCCAACAACAA
Associated Phenotype:
Not determined