ZMP
txnl1
Ensembl ID:
ZFIN ID:
Description:
thioredoxin-like 1 [Source:RefSeq peptide;Acc:NP_957432]
Human Orthologue:
TXNL1
Human Description:
thioredoxin-like 1 [Source:HGNC Symbol;Acc:12436]
Mouse Orthologue:
Txnl1
Mouse Description:
thioredoxin-like 1 Gene [Source:MGI Symbol;Acc:MGI:1860078]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa37196 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa43558 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa37196
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000006419 | Nonsense | 23 | 289 | 1 | 9 |
| ENSDART00000133976 | Nonsense | 23 | 289 | 1 | 8 |
Genomic Location (Zv9):
Chromosome 21 (position 1107924)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 21 | 812712 |
| GRCz11 | 21 | 929226 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGATCGGGAATGACTCGGATTTCCAGGCGGAGCTCAGCGGAGCGGGTTCC[A/T]GACTGACCGTGGTGAAGTTCACCATGAGCGGGTGAGTGAGCGAGAGAGAG
Long Flanking Sequence:
AACCTCGCCTTGCCTTAATTAAGGAATAATAAAGCGAAACAACTATGCTTAATTTTAAAAGGCTTACAATTACCTTTTGCATGTAGCTGAATCATGTCATATTACATTTTCATTTTATTGTTGTACTCCTTTTCTGTTATTGCTTATGTGTGTTCATTGATATACGTATACATGCAATTAAAAATATAATAATTAAAAAACAATTACGACAGTTGCAATGCTTTGCGACACCTCACGAACGATTCCAGTGACGTCGCTTGCAGAGTCCTCTGTGATTGGTCAGTTTCGTATCCTCCGTCATCACTACACAGGAAGCGTGTTCCGGTAAAAGCGTCGTGCCGCGCCGAATGCTCGGTGATTTTGCTCGATTTGTCCGGTTAGCGGTGATTGATTAATCGCGGTGATCAGCGGCTCGTTCCCGGTGTGCTGGAGTCATGGTCGGGGTCAAGGTGATCGGGAATGACTCGGATTTCCAGGCGGAGCTCAGCGGAGCGGGTTCC[A/T]GACTGACCGTGGTGAAGTTCACCATGAGCGGGTGAGTGAGCGAGAGAGAGTGTGTGTGTGAGGCCGCTGGTTCATTCAGATCACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACATTTACTAAGACTGACCGGAGGACGAAAACACAACACAAAAACACCGACATGACTTAGCAAATCAGACACACACGAGAACACAACAACACCGGCATGACTTAGCAAAACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACCTGACTGGAGGACGAGAACAAAACACAACCACCCTGACATGACTTAGCATAACACACACATACACACCACCTGACTGAAGGATGAGAACACAACAACACCGACATGACTTAGTAAACACACACGCACACACACATACAGGAGGACGAGAACACAACCGACAGGACTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa43558
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000006419 | Nonsense | 271 | 289 | 7 | 9 |
| ENSDART00000133976 | Nonsense | 271 | 289 | 7 | 8 |
Genomic Location (Zv9):
Chromosome 21 (position 1118029)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 21 | 822817 |
| GRCz11 | 21 | 919121 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACGAGGAGACGACAAAAATCAACTATTTGACGTTTATCGGGACTCCAGTG[C/T]AGGCCACGAACATGAACGACTTCAAACGGGTCTGTACAGGAGGACGATCT
Long Flanking Sequence:
TGTACCTAATAAAGTGGCCGGTGAGTGTATAAACCTGATGTAAATATTCAAAGTTCCCAGTTTGCCTCTTCCGCCTAATTGCGTCAAACTCCTCATACTTCAGGTTTTCATCACCAATCAAATCCTCTCTAGTATCCGACCAGCCCCGCCCCCCTTTTCTCATTGGCTGTTCATTTGATGCGCTTGCGCTCAACCACTCACTGGCAAAGCTGTGAGAAAAACAACTCTATTGGCGGGCTTAAAAGGGGGAGGGGCTAATATAAGCCCCACCCTCTTTTCATGTTTCAGCTTAGATTACGTCAAACATCTAATAAAAAAGGAACAATTCACAGCACACCTTCAGAAGAGTTTTACAAGGCTGGTGTTAATCTGAGCCCTGTTCATTAGTATGAAGGTTTGTCATTTTGCATCTGCTTTATTTTCAGTTATTTATCAAGTCAAACCAGGGAGACGAGGAGACGACAAAAATCAACTATTTGACGTTTATCGGGACTCCAGTG[C/T]AGGCCACGAACATGAACGACTTCAAACGGGTCTGTACAGGAGGACGATCTCCACTGAAATACTGAATATATTATCATTATTATGGAGGTTTGTGTTTGTAATGTGTGTGTATGTATGTATGTGTGTGTGTGTGTGTGTGTGTGTGTATAACGCAGGTTGTGGGTAAGAAAGGAGAAAGTCACTGAAGAGGAAAAGACGAGTTCGACATGTTGCTGAATCTCTCCACGGGCATCTCTCTCTGCCAACATGACTGGGCAAACAAACACACACACTCTCATATATACTCTTGCTCACACACACACACACACTCACTCATATACACACATACGTAATCTCTTACTCACACACACAAACGCACTCATACACTTGCACACACACTGATATAAACTCTCTCTGACATACATAGACATAAATGTATACTGACACACACACATAGTGACATACATGTGCGCGCACACATTCTTTTAAATGTACACACACATACATTGTTTCACACACTC
Associated Phenotype:
Not determined