ZMP
prrx1b
Ensembl ID:
ZFIN ID:
Description:
paired mesoderm homeobox 1b [Source:RefSeq peptide;Acc:NP_956344]
Human Orthologue:
PRRX1
Human Description:
paired related homeobox 1 [Source:HGNC Symbol;Acc:9142]
Mouse Orthologue:
Prrx1
Mouse Description:
paired related homeobox 1 Gene [Source:MGI Symbol;Acc:MGI:97712]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa37097 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa37097
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000061588 | Essential Splice Site | 83 | 245 | 2 | 4 |
| ENSDART00000131637 | Essential Splice Site | 55 | 212 | 2 | 5 |
Genomic Location (Zv9):
Chromosome 20 (position 34539776)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 34612289 |
| GRCz11 | 20 | 34515168 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCTAAAAGCTCCAGCTCCTTAGGTAACTAACTGTACATGTGTGTGTATAC[A/T]GATGAGCAGCTGAACTCAGAAGAAAAGAAGAAGCGGAAACAGCGGAGGAA
Long Flanking Sequence:
AGTTTTTTTTGTAGTAGAAGCAGCAATTAGTCAAAACAATTCTATGATAATACACAAAAAAAGACAAAAAAAATAGTAATAAATGACTGGACAGTTAAAATGCAAATCAGTGCCTGTTCATGGTTTATGGTCTTGTGAGAAATATATAAACAAAGCATTTTCATTACATTTGTACAGTAATTTAAAAATAACTGGGATCACTTAAGTGTAAATTTGTTTTAAATGTGTTAAATTCTATTTTTCAAGTCAATGTAAAAGAAAACTAAATTAATTAAATTAAATTCAGATTGTATTTTAATATGTTATGTCTGTAATTTTACCTTGCAAAAACATATCAGTGAGATATAATCCTAAATTAAATATAATCTTTTAAAATATTTATATTTTTACTTGTTAAAGATTTGAAATCGACAGCATTTAGAAGACATTTAGGAAATTAATTTTGAATTATCTAAAAGCTCCAGCTCCTTAGGTAACTAACTGTACATGTGTGTGTATAC[A/T]GATGAGCAGCTGAACTCAGAAGAAAAGAAGAAGCGGAAACAGCGGAGGAATAGAACCACGTTTAACAGCAGCCAGCTGCAGGCGCTGGAGCGAGTGTTTGAGCGGACACACTACCCAGATGCCTTTGTTAGAGAGGACTTGGCACGTAGGGTCAATCTTACTGAGGCTAGAGTTCAGGTAAACTTCACACCTCACAATCATCAATGACTGTCAACTAGGTTTTCAGTTCACTGGTTGATTCGAGAACACATATTTTGCAAATCTAAGAAATATACAAAAAATGTACGGGTAATTCTACAAAAGAGCCTATATAAATAAAAGCTCAGAAAAAGAAGATTAAACCACTCGCCTACTTCGGGGTTTCAGCAGGGATTGCAGTTACAGATGAACGTGATGTTAACACTGGAGCTTTGTGTTGTCATCGGCCCTATCGTCAGAGTTCAGCTCGATTGTTTAAAAAGCCTCAGTCGATCAATCGGCCTCTCAGCACACATGCTGTA
Associated Phenotype:
Not determined