ZMP
nbas
Ensembl ID:
ZFIN ID:
Description:
Neuroblastoma-amplified sequence [Source:UniProtKB/Swiss-Prot;Acc:Q5TYW4]
Human Orthologue:
NBAS
Human Description:
neuroblastoma amplified sequence [Source:HGNC Symbol;Acc:15625]
Mouse Orthologue:
Nbas
Mouse Description:
neuroblastoma amplified sequence Gene [Source:MGI Symbol;Acc:MGI:1918419]
Alleles
There are 19 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa9535 | Essential Splice Site | Available for shipment | Available now |
| sa17866 | Nonsense | Available for shipment | Available now |
| sa16290 | Nonsense | Available for shipment | Available now |
| sa16834 | Nonsense | Available for shipment | Available now |
| sa23747 | Nonsense | Available for shipment | Available now |
| sa23746 | Nonsense | Available for shipment | Available now |
| sa32302 | Nonsense | Available for shipment | Available now |
| sa23745 | Nonsense | Available for shipment | Available now |
| sa23744 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa9535
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000047834 | Essential Splice Site | 1075 | 2372 | 29 | 53 |
| ENSDART00000138708 | None | None | 154 | None | 3 |
Genomic Location (Zv9):
Chromosome 20 (position 33099648)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 33157888 |
| GRCz11 | 20 | 33060767 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATTTCCCAGAACACTCATRTGCACCTGTTCCACTGTTTGTTTTTTNGCTT[A/T]GAAACCCTCCTGTGAGTGAGACCGTGTGGAGAAGTTTACTTCAAGATCTC
Long Flanking Sequence:
AATAAAAAGTATAATAATGATTCTGAAAATTCAGCTTTGCATCATAAACTAATCGTATGTAAGATATATTGACATAAAAAACTATTATTTTACGATGTAATAATATGATCAGTGACATGCAGCATTGGACAGTGTAGGAATATAAGGAACTCAAATGTTTGAGCAGTAGTGTACAAAAAGAGAATTGAATCTTCTCATAGTAATAGGGCTTTTAGTAAACTCAGTTTTAAGCAGTTCTATTTTAATCAGCCTCTTTTTCTGTCTCTCTGCAGTGTTGCTGAGGTGTTGGAGAAGCACGGTCTCCAGAAGCCCATCTCCTTTGTGAGAAACAGTCAGAACAGCAAAGAGGAAGCTCACCAGCTGATGGTCCGACTCACCCGTCACACAGGACGCAAGTATGACATGCACACACACAGTAGCACAAGCATACACAGTCTCAGCTTGCTTGGCATTTCCCAGAACACTCATATGCACCTGTTCCACTGTTTGTTTTTTTGCTT[A/T]GAAACCCTCCTGTGAGTGAGACCGTGTGGAGAAGTTTACTTCAAGATCTCCTGGACATGCAGCAGAATGTGTACACCTGTCTAGAGCCAGAGACTTGCCATCAGGTACTAAATGATACTAAAATATATAATAATTGTGCAGTATCGCACTAGTGAGTGACTGCATATTCATAATAGAAACATTACTTTAAATGTTCACTGGGTAAAGCAAGATCTTTGTCGTAGTGTTGTCAGTGGTTTAGGTTATATGGATTTTTCACTGAAGGTCAGTGCATTTCTTGGTTGCATCTCACAAGGTGTTGTCAGAAGTAGAAATAATGTCCTTGTTGACAGAACAACCTTGTTTCATTCATTTACTGTATTGAAGTATGGTATCACTTTATTTTAATGGTCCCTTTAACGCATTTTGTTGAATTTAAGTTACATTGCATCTACATGCAAACTAATTCTCATTAGATTATAAGAAGATTTTTAGGTTGGGGTTAGGGTTAATGTAAGTTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa17866
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000047834 | Nonsense | 1117 | 2372 | 30 | 53 |
| ENSDART00000138708 | None | None | 154 | None | 3 |
Genomic Location (Zv9):
Chromosome 20 (position 33092487)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 33150727 |
| GRCz11 | 20 | 33053606 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTGCAAATGTGTCTCTCATCTGCACAGGTGTTTGTAGAGAGCCTGTTGTG[T/A]TCGAGCCKAGAGGAGAATGTGCGTCTGGCGGGTCAGTTGATGCACTGCAG
Long Flanking Sequence:
GGGTGAACTATTCCTTTAACTTGCCTTTTTAATTGTTTAAATGAGAGTTTTTCTTCTAAACATTTTCTCAGAGCCAATGTTAGTTTTGATTGTTTTTTTCTAGGTCTCACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACATACACACACAAAAAAGTACTTTGTTACATAGAAAGAAAAAAATAATTAAAGTGTATGGCACTTTAAAGTGTATGGTTTTGTAATTCTATAAAATCTTGAATTTTATAAGTCTAACTATTAAAACAGTGAATGACCTTTAACAATCTGAATTCATTTAATGTTTCAAAGGAGTTTTATAAAAAATATTCTGTGATTAATTTTTTTTTTTTCAGAATTAAGAATATGTCGATGCTTGATTAAGTTTTACTTGTATGAATGGTGTAGTAGAATAATAAAGGTGTTTGCAAATGTGTCTCTCATCTGCACAGGTGTTTGTAGAGAGCCTGTTGTG[T/A]TCGAGCCGAGAGGAGAATGTGCGTCTGGCGGGTCAGTTGATGCACTGCAGTGGTGTTTCAGAGGACACTCCGGTCAGCGTGTCGCTCCGGGGTAAAGCTCACGCTCGTGTGTCTTACAGCCGAAGTGTGGAGCTGGTTCTGGCGGCCGCTCGTGAATACTTCAACTCTTCAGCCACCCTCAGTGACCCCTGCATGAGTCTGGCACGGTATGATGATCTGTTACACTCCGATTTGTTTAGAGATTTGCCGTGTAAAACCCACCAAAACACTACACTAAGATACTACTGTGGTTCTCTATTTGTCTTTGTTCATTTGTGCATCAATATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa16290
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000047834 | Nonsense | 1439 | 2372 | 37 | 53 |
| ENSDART00000138708 | None | None | 154 | None | 3 |
Genomic Location (Zv9):
Chromosome 20 (position 33051733)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 33109973 |
| GRCz11 | 20 | 33012852 |
KASP Assay ID:
2261-4573.1 (used for ordering genotyping assays)
KASP Sequence:
TACCACCATGAGCACCAAAGCTGTCCTGACCACCGTCATCGACTCTCACT[G/A]GTGGAGAGAGTCCCTCAGCCTGCTTCGCCCACTGCACGTAAGTCTCATCC
Long Flanking Sequence:
ATCGGTGTTATAGATCTGCTGGTTTCAGACTGGTGAATATTTCAAACCGTTATGTGGTGGTCAGATGTTTGTTTATATTATCTATTATCTTAATTATTAATATTGTTACATAGCATAGAGGACATGGTAAACCGTTTCTCACAATTTAAATGGCTAACCTCCTATACTGTACATCTTATTTTGATCTTCTGGGGGAATCAAGTGTAAATTTAACTTGTAATTTGCACTTTGGTGCTAGCAAGAAAGTCAAATTTTCTTTAGAAAGAGAAAAAAAGCTACTGTACTTCCATTGTTTACTGTTTCAATATAACCACTGTAATCTGATCAGTATGGTCCATGCTTAACCTTTCTTGGCTGCCCATAACAGGTTGGAGCTGCTGTTCCTGGTTCAATTAACCCTACAGACCTGCTGCACAGAACCACAGCCCGCACCATAGAGGTCCTGACCAATACCACCATGAGCACCAAAGCTGTCCTGACCACCGTCATCGACTCTCACT[G/A]GTGGAGAGAGTCCCTCAGCCTGCTTCGCCCACTGCACGTAAGTCTCATCCAGAAATCAGCATCAGACGCCTCGCTTTGTTATGCATCCTTCCTCTTTAAAACACCACTGCCAGGAACAGGTTGGACAAAGCTCAACAGTGAGACTCGGCTGCACATTTTTTGGCAGCTTTTCTGAGGCCATTAAAACCTGGCATGATTGAACGAACCTCTCCCTGGCCGATGTCTGCTTGTCTCTCCGTGATGAGGTTTGTTTTCGGAGGTCCTGTTGTAGTGGTATTTGGCCAAAAAGGTTGGTTTTGGTCCCCCCGTGGTAAAACACAACAACAAAAAATAAGTTATTCAGATTTACAATTTACAAATGGTAAATAAATTATTTAATCAGGTCTTAGAATAAATATTCAAGTGAACAAATTATATAAGATTTGAACACAAGTTTTTAGTTTTAATTCATGTCATTACAAAACAAATAAATGAACAGCTTAATTTCCAGGACCAAGAAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa16834
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000047834 | Nonsense | 1550 | 2372 | 40 | 53 |
| ENSDART00000138708 | None | None | 154 | None | 3 |
Genomic Location (Zv9):
Chromosome 20 (position 33037905)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 33096145 |
| GRCz11 | 20 | 32999024 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CAGCTAGCCAGTGATGCTTTTCCCAAAGATATGACACTCGCCCTGGCCTA[T/A]TTACTRGCTCTACCTCAGGTGAGTCTGACTGCTCTATTTGCAGATCTCTC
Long Flanking Sequence:
ATGATAAGTTTTATTGTGTATCATACATGCAATAGACAGTATTTGGACTAGTACTGTAAATAGTACTATTCAGTTTTTTTTTTTTTGTTGTTTCTGAAATACCATTAAAGCAAATTAGGCAAATCCATTCAAAAACCGCTAGCTTGTAAGGAAGATTTTGCATATCAAGAACAGCCTCCTGTAATTTAATGCTTTTTAAAATAGTATGTTGGTTACAGATAACAAGATGTCATGGCGCTGAATTTGCGCCATACTCTCAGTTTTGCTGTCACAGTCACATTTCAGGTTTATACGCTGCCATTGAGAGCTCATTTTTTCCCTCTCTTTCTCTCTCTTTTCTGTCACATCATGTTACAGTACAGCAAGGAGGTGCTTCTCTGCAGTAATAACTCTGAAATGTTCATCCTTCTTTTTTCTCCCCATCTCCTCTGTCATTTCGCAGTGCTCCTTCAGCTAGCCAGTGATGCTTTTCCCAAAGATATGACACTCGCCCTGGCCTA[T/A]TTACTGGCTCTACCTCAGGTGAGTCTGACTGCTCTATTTGCAGATCTCTCTCTCTATCTCTCTCTCTCTTTCTGAATGACTGTCTGAGATATTTGAGCTCTGCCTCCTCAGATTATGGTTTTCCATAACAATTTCTTATGCTGCCATCAGAAGCGTGCAGTATTGAAAGATAAAACCATTTAAAAGTCACTAAAAATCTAATATCAAGCCTCATACCTGTTGGCCCCTGTTCCGTTACGTTCGGGGCCTTCGTTTCAAAGTATTATTGCATTTTTCCTTATCCAGATGGCTTCATGCTCTAATGGAATCATCTGAAAATGGTCTTGATGGGCTTAAAATTGATAGCATGTCTCCAGTGATACTTCGCAGTTCATTATCAGGTGAAGTTGGGTTGAAACTGATGTGCCGTTACTGAGGCAATTGTCCTAGACTTCTTGCTTTGACCTCGAAAGTCCTCATGGGTCGAATTTTCGAGACTTTCAATCACTCATTTTGCTTAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa23747
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000047834 | Nonsense | 1816 | 2372 | 45 | 53 |
| ENSDART00000138708 | None | None | 154 | None | 3 |
Genomic Location (Zv9):
Chromosome 20 (position 32987542)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 33045782 |
| GRCz11 | 20 | 32948661 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CATCCTAGGTCTGGACTATAAGAAGATGACAGAGGAAAATTCAGATCCTT[T/A]GAAAGCTCTGGAGCCGATACTGACCAGCCAGAACGTCCTGTCCATCTCCA
Long Flanking Sequence:
CAAAACAGTTACTTTTGTGAGGCAATAAAATAAATGGGGCCCTTGGGTTTGCTATAGCCCCAGGGCCCACAATATTTTCTGAATTCAGCCCTGATAGTATAAATTTTTTTGCAAAAGAAATAACTTAAATGGAGCCCATAAAGGTAGAAAGTTATCAATGCATCATCAGAAAAATCCTCATCTTTTTTGACATTTCAATTTTGACAAGCATCATCGTCGCCATGTCAAGGTATTACTGCATTTTGTTTTGAATAATTACGCTCAAGAATCTAGTATACAGAGAAATATTTAGAAAACATATTCATTAAACTGTATCATAGATTGTGTTTATATAATAATTATAAAACTAAGAAGAAGAAAGGGGGGAAGCTAGGAAAATATTTATTAGTAAAAAGTGACAACTAGCTCCATTGTGCACTCTGTATGATGCTTGAAACATAATGTCACTTTCATCCTAGGTCTGGACTATAAGAAGATGACAGAGGAAAATTCAGATCCTT[T/A]GAAAGCTCTGGAGCCGATACTGACCAGCCAGAACGTCCTGTCCATCTCCAAACTGGCCTCTCGAATCCCCCAGAAGGGAGGTGAAGCTCTAACCTCCAGCGCTGTTCATTCCACCTGGCTTCATAAACTGTTCTGGGAAGGAGATCAGCATGTGCTGAAAAAAGCCCCACAGACCGACCAAGACTTCCTTCATGCCTACGACACCTGTGCCAAATATTTTGACCGACTGCTGCCTGTGGATTTTGTCAATTTTTTGGATGCCATCACCTTTTCACCTGAAGCAGCCAATAAGGTGAGTCGAAACTAGGGTTTGCAGTGTTCTGTTTTCAAAATCCTCACAAAACAATCAACATATTTAACAATATTTACTTGTTCTGCCCCGCGAAGCGGTGGCGCTGTAGGTAGTGCTGTCGCCTCACAGCAAGAAGGTCACTGGTTCAAGCCTCGGCTGGGTCAGTTGGCGTTTCTGTGTGGAGTTTGCATGCTCTGTGTGTTCGCGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa23746
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000047834 | Nonsense | 1840 | 2372 | 45 | 53 |
| ENSDART00000138708 | None | None | 154 | None | 3 |
Genomic Location (Zv9):
Chromosome 20 (position 32987471)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 33045711 |
| GRCz11 | 20 | 32948590 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGACCAGCCAGAACGTCCTGTCCATCTCCAAACTGGCCTCTCGAATCCCC[C/T]AGAAGGGAGGTGAAGCTCTAACCTCCAGCGCTGTTCATTCCACCTGGCTT
Long Flanking Sequence:
ATATTTTCTGAATTCAGCCCTGATAGTATAAATTTTTTTGCAAAAGAAATAACTTAAATGGAGCCCATAAAGGTAGAAAGTTATCAATGCATCATCAGAAAAATCCTCATCTTTTTTGACATTTCAATTTTGACAAGCATCATCGTCGCCATGTCAAGGTATTACTGCATTTTGTTTTGAATAATTACGCTCAAGAATCTAGTATACAGAGAAATATTTAGAAAACATATTCATTAAACTGTATCATAGATTGTGTTTATATAATAATTATAAAACTAAGAAGAAGAAAGGGGGGAAGCTAGGAAAATATTTATTAGTAAAAAGTGACAACTAGCTCCATTGTGCACTCTGTATGATGCTTGAAACATAATGTCACTTTCATCCTAGGTCTGGACTATAAGAAGATGACAGAGGAAAATTCAGATCCTTTGAAAGCTCTGGAGCCGATACTGACCAGCCAGAACGTCCTGTCCATCTCCAAACTGGCCTCTCGAATCCCC[C/T]AGAAGGGAGGTGAAGCTCTAACCTCCAGCGCTGTTCATTCCACCTGGCTTCATAAACTGTTCTGGGAAGGAGATCAGCATGTGCTGAAAAAAGCCCCACAGACCGACCAAGACTTCCTTCATGCCTACGACACCTGTGCCAAATATTTTGACCGACTGCTGCCTGTGGATTTTGTCAATTTTTTGGATGCCATCACCTTTTCACCTGAAGCAGCCAATAAGGTGAGTCGAAACTAGGGTTTGCAGTGTTCTGTTTTCAAAATCCTCACAAAACAATCAACATATTTAACAATATTTACTTGTTCTGCCCCGCGAAGCGGTGGCGCTGTAGGTAGTGCTGTCGCCTCACAGCAAGAAGGTCACTGGTTCAAGCCTCGGCTGGGTCAGTTGGCGTTTCTGTGTGGAGTTTGCATGCTCTGTGTGTTCGCGTGGGTGTCCTCCAGGTGCTCCGGTTTCCCCCCCCCCACAATCCAAAGATATGTGGTACAGGTGAATTGGGTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa32302
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000047834 | Nonsense | 1901 | 2372 | 45 | 53 |
| ENSDART00000138708 | None | None | 154 | None | 3 |
| ENSDART00000047834 | Nonsense | 1901 | 2372 | 45 | 53 |
| ENSDART00000138708 | None | None | 154 | None | 3 |
Genomic Location (Zv9):
Chromosome 20 (position 32987287)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 33045527 |
| GRCz11 | 20 | 32948406 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGTGCCAAATATTTTGACCGACTGCTGCCTGTGGATTTTGTCAATTTTT[T/A]GGATGCCATCACCTTTTCACCTGAAGCAGCCAATAAGGTGAGTCGAAACT
Long Flanking Sequence:
TTACGCTCAAGAATCTAGTATACAGAGAAATATTTAGAAAACATATTCATTAAACTGTATCATAGATTGTGTTTATATAATAATTATAAAACTAAGAAGAAGAAAGGGGGGAAGCTAGGAAAATATTTATTAGTAAAAAGTGACAACTAGCTCCATTGTGCACTCTGTATGATGCTTGAAACATAATGTCACTTTCATCCTAGGTCTGGACTATAAGAAGATGACAGAGGAAAATTCAGATCCTTTGAAAGCTCTGGAGCCGATACTGACCAGCCAGAACGTCCTGTCCATCTCCAAACTGGCCTCTCGAATCCCCCAGAAGGGAGGTGAAGCTCTAACCTCCAGCGCTGTTCATTCCACCTGGCTTCATAAACTGTTCTGGGAAGGAGATCAGCATGTGCTGAAAAAAGCCCCACAGACCGACCAAGACTTCCTTCATGCCTACGACACCTGTGCCAAATATTTTGACCGACTGCTGCCTGTGGATTTTGTCAATTTTT[T/A]GGATGCCATCACCTTTTCACCTGAAGCAGCCAATAAGGTGAGTCGAAACTAGGGTTTGCAGTGTTCTGTTTTCAAAATCCTCACAAAACAATCAACATATTTAACAATATTTACTTGTTCTGCCCCGCGAAGCGGTGGCGCTGTAGGTAGTGCTGTCGCCTCACAGCAAGAAGGTCACTGGTTCAAGCCTCGGCTGGGTCAGTTGGCGTTTCTGTGTGGAGTTTGCATGCTCTGTGTGTTCGCGTGGGTGTCCTCCAGGTGCTCCGGTTTCCCCCCCCCCACAATCCAAAGATATGTGGTACAGGTGAATTGGGTAGGCTAAATTGTCCATAGTGTATGAGTGTGAATGAGTGTGTGTGGATGTTTCCCAGAGATGGGTTGCAGCTGGAGGAGCATCTGCTGCGTAAAAACATATGCTGGATAAGTTAACGTTTTATTCCGGTGTGGCAACCCCAGATTAATAAAGGGACTAAGCCGAAAAGAAAATGAATGAATGAATG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa23745
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000047834 | Nonsense | 1901 | 2372 | 45 | 53 |
| ENSDART00000138708 | None | None | 154 | None | 3 |
| ENSDART00000047834 | Nonsense | 1901 | 2372 | 45 | 53 |
| ENSDART00000138708 | None | None | 154 | None | 3 |
Genomic Location (Zv9):
Chromosome 20 (position 32987287)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 33045527 |
| GRCz11 | 20 | 32948406 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGTGCCAAATATTTTGACCGACTGCTGCCTGTGGATTTTGTCAATTTTT[T/A]GGATGCCATCACCTTTTCACCTGAAGCAGCCAATAAGGTGAGTCGAAACT
Long Flanking Sequence:
TTACGCTCAAGAATCTAGTATACAGAGAAATATTTAGAAAACATATTCATTAAACTGTATCATAGATTGTGTTTATATAATAATTATAAAACTAAGAAGAAGAAAGGGGGGAAGCTAGGAAAATATTTATTAGTAAAAAGTGACAACTAGCTCCATTGTGCACTCTGTATGATGCTTGAAACATAATGTCACTTTCATCCTAGGTCTGGACTATAAGAAGATGACAGAGGAAAATTCAGATCCTTTGAAAGCTCTGGAGCCGATACTGACCAGCCAGAACGTCCTGTCCATCTCCAAACTGGCCTCTCGAATCCCCCAGAAGGGAGGTGAAGCTCTAACCTCCAGCGCTGTTCATTCCACCTGGCTTCATAAACTGTTCTGGGAAGGAGATCAGCATGTGCTGAAAAAAGCCCCACAGACCGACCAAGACTTCCTTCATGCCTACGACACCTGTGCCAAATATTTTGACCGACTGCTGCCTGTGGATTTTGTCAATTTTT[T/A]GGATGCCATCACCTTTTCACCTGAAGCAGCCAATAAGGTGAGTCGAAACTAGGGTTTGCAGTGTTCTGTTTTCAAAATCCTCACAAAACAATCAACATATTTAACAATATTTACTTGTTCTGCCCCGCGAAGCGGTGGCGCTGTAGGTAGTGCTGTCGCCTCACAGCAAGAAGGTCACTGGTTCAAGCCTCGGCTGGGTCAGTTGGCGTTTCTGTGTGGAGTTTGCATGCTCTGTGTGTTCGCGTGGGTGTCCTCCAGGTGCTCCGGTTTCCCCCCCCCCACAATCCAAAGATATGTGGTACAGGTGAATTGGGTAGGCTAAATTGTCCATAGTGTATGAGTGTGAATGAGTGTGTGTGGATGTTTCCCAGAGATGGGTTGCAGCTGGAGGAGCATCTGCTGCGTAAAAACATATGCTGGATAAGTTAACGTTTTATTCCGGTGTGGCAACCCCAGATTAATAAAGGGACTAAGCCGAAAAGAAAATGAATGAATGAATG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa23744
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000047834 | Essential Splice Site | 2081 | 2372 | 48 | 53 |
| ENSDART00000138708 | None | None | 154 | None | 3 |
Genomic Location (Zv9):
Chromosome 20 (position 32966030)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 33024270 |
| GRCz11 | 20 | 32927149 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAGGTACTGGAAGGAATAGTTGCAGTGGTGCACACTAATGTACAAAGCGG[G/A]TACGTTTGTCCTTTGTTGCTATGTTCTCGTTTTTATTATTGAAGCACATT
Long Flanking Sequence:
AAAATTACTAGAATTCTGATTGATTTTGAGTTTATATTTTGCAGCTTTTACTAGAAGTCACTGTTTTAAGCAAACATTTGTAGTTACATTATTTTCTTTATTGAATTTATTTATTTGCTTCATTTAGAACAGTGTTATTATTCAACACCAACATGACAGAGCAATTTCTCCATCAGTAGGAATGAAACTATAATTAGATGGTGCAGCCTCATCCATTAAAGCAAAACACATATACCTTTAATGGAGGGAGACAAACAAGGCCAGAAGGGAATGGAGAAACCCTGAAGCTACAGAAAATCCCTTCCTTCAGTCGACATGCATAAAGTTTGCAGCCATAAATCCACTTAAAGGCCTCAAGACATTGCATCAAAACTCAAGCTGTGTGTGTATGTGTGTGTGTTTGTTTTCAGCGGCGACAAGGACGTGTTGAAAGATTATGCAGACCCCTTGAAGGTACTGGAAGGAATAGTTGCAGTGGTGCACACTAATGTACAAAGCGG[G/A]TACGTTTGTCCTTTGTTGCTATGTTCTCGTTTTTATTATTGAAGCACATTGCTGTCCATTTTGCCTCAGAGAAAAGGATATGATGGTACTTAAAGTGCAACATCATCTGAGGACACAGTACTCTAGCAGTATTGTAAAAAAAGCTAATTTATATATAGTGGTAAAGATTTTAGGGATGTTTCTGGTGGTAAAGGAAATTGTTTAGCTTGGTCTGAAGAAGAACCAGTTATAGATAAAAAAGTGTTCAAAAAGTAATTGCACTTCTTTTATAGTAGTAATTAAAATAAGAAATGTTTTTGAGGATTTAAAATCTGATGTGTAATCGCATATAAAATATCATTGTCACCATTAATTCAAACATAGTGCACTGGACAAGTCTGAACAAGTTCCGTCCACGCATGTGCAAGGCAGGCAGTTCTGTACAATTGCATAATCTATTGGCTTAAAGATATCGGACTAATTTTGATATCAAATTTATAACGATAACAATAAAAATTGCA
Associated Phenotype:
Not determined