ZMP
psmc6
Ensembl ID:
ZFIN ID:
Description:
26S protease regulatory subunit S10B [Source:RefSeq peptide;Acc:NP_001003832]
Human Orthologue:
PSMC6
Human Description:
proteasome (prosome, macropain) 26S subunit, ATPase, 6 [Source:HGNC Symbol;Acc:9553]
Mouse Orthologue:
Psmc6
Mouse Description:
proteasome (prosome, macropain) 26S subunit, ATPase, 6 Gene [Source:MGI Symbol;Acc:MGI:1914339]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa36983 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa36984 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa36983
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000053834 | Nonsense | 10 | 389 | 1 | 14 |
| ENSDART00000115134 | Nonsense | 10 | 269 | 1 | 15 |
Genomic Location (Zv9):
Chromosome 20 (position 9944258)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 9776187 |
| GRCz11 | 20 | 9763427 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCGAGAGCGAAGCGGCAGTGAACATGGCGGAAAACAGGGAGAAAGGTTTA[C/T]AAGACTACAGAAAGAAATTACTGGAGCATAAAGAGATTGACGGGCGCCTC
Long Flanking Sequence:
ATTTGTTGCTAGTTGCTTTTCGAAAAAAAAAAAAAGTTGCTAGGGTAGTATGAAGAGTTGCTAAATCTAGCTACACACTTGCTAAATTGGCAAAACTTTGTATAACCACAGAGCATAGAATCACCCAGAGGTGACATTCTAGTACAACTTGGTAAACAGCCACTAGATGGCGCGGCGGCCATTTTGGAATAAAAACTCCAATAGAACAACAGCAAATTATGTCTGTAAAATAAACTATTTAAAGTGCTGATGATTGTCATAGTAAGTGTTGTATTGTCGTTTTTCGGGTTGTATCTCACCTTAAATTAGCCTTTTAAATAAATCATTGAAAAACAAATCAGCTGCTTGCCGCCTCAAATTAACACTGTATCGCGCTGTTCGTCCAGCAGGGAGCGCTGACGCGCCTCGGTTTGGTTTGTGACGCGCTACTATTAAACATCACGAAGAAGCGCGAGAGCGAAGCGGCAGTGAACATGGCGGAAAACAGGGAGAAAGGTTTA[C/T]AAGACTACAGAAAGAAATTACTGGAGCATAAAGAGATTGACGGGCGCCTCAAAGAGTGTAAGTTCGATGTTTTTCTGTTCACGTCAGACTGTCATTGAGCAGTTTGACATCTTCATAGGCTGTTGTTTGCGTTATCTCAGCAGCCTGTACTGTAAGTCGCTTTGTCATGCAGTGCTGAAATCAATTAGCCGCTAATGGTAACAGCTGAAATAATCCATAGATCCCCTTTAAATTCATAATTAGAGACACACAACATGATTATACGTATCTCCCGATCTGAAAACATCATATATTATAAAAAAAGAGCCTTCAATACAGCTGTTTTCCAGTATCATGCTATCTCACGATAACATTTAGCATCTCTGACACATGAAGCTGATGGAAGTTGAACTTAATGTTTGCACATGTAAATAAACGCTCTGTGTTGCAGTGAGAGAGCAGCTGAAGGAGCTCACTAAACAATATGAGAAGTCTGAGAATGACCTGAAGGCTTTACAGAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa36984
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000053834 | Nonsense | 63 | 389 | 3 | 14 |
| ENSDART00000115134 | Nonsense | 63 | 269 | 3 | 15 |
Genomic Location (Zv9):
Chromosome 20 (position 9944895)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 9776824 |
| GRCz11 | 20 | 9764064 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTATTTAAATTGTTGCATTGTCTTTGTAGATTGTCGGTGAAGTGCTGAAA[C/T]AGCTGACTGAGGAGAAATGTAAGGCCAGATTCTCTTTATTGAGCTGTAGA
Long Flanking Sequence:
TCAGCAGCCTGTACTGTAAGTCGCTTTGTCATGCAGTGCTGAAATCAATTAGCCGCTAATGGTAACAGCTGAAATAATCCATAGATCCCCTTTAAATTCATAATTAGAGACACACAACATGATTATACGTATCTCCCGATCTGAAAACATCATATATTATAAAAAAAGAGCCTTCAATACAGCTGTTTTCCAGTATCATGCTATCTCACGATAACATTTAGCATCTCTGACACATGAAGCTGATGGAAGTTGAACTTAATGTTTGCACATGTAAATAAACGCTCTGTGTTGCAGTGAGAGAGCAGCTGAAGGAGCTCACTAAACAATATGAGAAGTCTGAGAATGACCTGAAGGCTTTACAGAGTGTGGGGCAGGTAAGATCTGCTCTGTAAATCATTGTTTTTCTTATTTCCACATTAGGGATTTGACTATATCAGTGCATTTATAACGTTATTTAAATTGTTGCATTGTCTTTGTAGATTGTCGGTGAAGTGCTGAAA[C/T]AGCTGACTGAGGAGAAATGTAAGGCCAGATTCTCTTTATTGAGCTGTAGATAATTATAGTTTGTGTCTATCTGTTCATTGTTTAATGTATTCTTCTTTTGCAGTTATTGTTAAAGCAACTAATGGACCACGATATGTGGTTGGATGTCGCAGACAGGTGAGCATGTACATGCATACGCGCACACATACAGTTTCAGTAAAAAGTTTTGAAAAAAATTACTTTTTTGTTACACTCATATTAGGTTTTCACTAATGATGCTGAAAATTCCAGTCAAATTATAGAAAAATACCGTTTTAAATTGTATCCACAAAAAATTAACTGTTCAGCTATTATATGTTTGTTAATCTTTTACAATAGTAGTTTATTGTATTGATGGTCAGATAAATCCATTATTTATCCAGCGATAAAACCATATGCAGATTAGAATTTTCAATATTAAAAAAGTAATATCAATTCTAAACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
Associated Phenotype:
Not determined