ZMP
si:ch1073-351m12.1
Ensembl ID:
ZFIN ID:
Description:
pumilio homolog 2 [Source:RefSeq peptide;Acc:NP_001096040]
Human Orthologue:
PUM2
Human Description:
pumilio homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:14958]
Mouse Orthologue:
Pum2
Mouse Description:
pumilio 2 (Drosophila) Gene [Source:MGI Symbol;Acc:MGI:1931751]
Alleles
There are 7 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa11527 | Nonsense | Available for shipment | Available now |
| sa36964 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa11527
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000086578 | Nonsense | 21 | 1206 | 1 | 25 |
| ENSDART00000145964 | Nonsense | 21 | 422 | 2 | 8 |
Genomic Location (Zv9):
Chromosome 20 (position 6177428)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 6082702 |
| GRCz11 | 20 | 6126560 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CATGCAGCATCCTAGGTATGAATGACGTACCCTGGCAGGAGACACAATGT[G/T]GAACGCTGCACACCAATGGTGCACCAGAAACTGGTGGGGTCAGAGTCCAT
Long Flanking Sequence:
AAGTTTATCGTTGGCTGAAAAATACTAGTTGTGCATATAGCCCATTCGTTAACAGAATGACAAGTTTAAGAGAACAAACTCTTACGTACGCGCATGTAACTCTGTAATGCATTAAGCTGCCAACTGGAAGTTGGAGCATCCACCCTAAGTGTATGCATAAAGCCTAATGGGTAATTTAGCATTCTATGAAAAAGACCGATGAACTTGGCTCTTGGCTAACTTTTTCAAATTAGCAGCACTTGTGCTCATAATCAAAAAATGTTGGAGCAGTTAAACATTTTAGAGCAAATTTAGGAGCATCAGAGTGTAGTGTGTTTTTTTAATTATATATGCAATATATCATTAATCAGGATGAATATAATGCAAAGAGGCATATGCACTTTTAAACTGCTGTTTAACTTCACTGCTCCTTTTTTATTTCTTTAGGTTCTTTCCGTGGAATGAGCATTCCATGCAGCATCCTAGGTATGAATGACGTACCCTGGCAGGAGACACAATGT[G/T]GAACGCTGCACACCAATGGTGCACCAGAAACTGGTGGGGTCAGAGTCCATGCAGGGTGTCCTCTAGCCACGGTTGGAGGTGCCAGGCAGGTACCTGGAGGAGTTCACCCTTTGCAGGGAATGGCCAATCCCAACCCCTGCACCCAGCCTCTTCTGAGTGGTCGTTCACAAGATGATGCCACTGTGGGCTATTTCTTTCAAAGGCAGCCTGGAGAGCAAATGGGAGGCTGCACTGGCAACAAACACCGCTGGCCCACTGGTGATGGAAACCATGTTGACCAGGTATGAAATCGGCTGCCATTATTGCGGAATGATTTTCTTGATTCATTATCATTCAATTAAATAGATTTTACTTAGTTTTTCAGTGTACTACAACGTTTTGTAATATATGCTGTTTTATCATAAAGCATGTGCTGGATAATTACTGCCTTTAAGAGCTGTCTTTAGTGACAAAATGCACATGAAAATTCTCTTTCCAGCCCTTGTGTAAACATTTTTTAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa36964
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000086578 | Nonsense | 617 | 1206 | 12 | 25 |
| ENSDART00000145964 | None | None | 422 | None | 8 |
Genomic Location (Zv9):
Chromosome 20 (position 6153948)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 6059312 |
| GRCz11 | 20 | 6103347 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATAGTATGTCTGGTCCTGCTAATGGTCTATACCGGTCCATGGCATGCCAA[C/T]AACCCCAGCAGCCTCAACCTCAGCAGCAGCTTCCTCCACCTTCCAGCGGT
Long Flanking Sequence:
AATTGTTATGTATATATTATTTAAAAAATATGTTCAGAACATGAACAAAAAATTAAAGAAATGCTAAATGTTTACATAAGGTTGCATAAAGATAAACGATGTGTCTGTGTTTAAATTAGGCTACCAGGTCCTAGCGCCGGCTGCTTATTATGATCAGACTGGTGCATTGGTCATGGGTCCTGGAACTCGCACTGGCCTGGGTGGACCTGTTCGACTGGTCCAAACCCCTCTCCTCATCAACCCAGCAGCCGCACAAGCTGGTGAGTATGCCAATTGTTTTGTTTTTTTAAATGGAAAATATTTTAGGATTTTTTTTTGTTTGTTTAGTCTGGCCTAACTCATTAAATCAAAATGTGACTTCTTTATACGTGTATTACTTGTATTGCTTTTAATGTTATTCAACATTTACTTCTCGTCTAGCTGCAGCTGCATCTGTATCAGGCTCTGGTAATAGTATGTCTGGTCCTGCTAATGGTCTATACCGGTCCATGGCATGCCAA[C/T]AACCCCAGCAGCCTCAACCTCAGCAGCAGCTTCCTCCACCTTCCAGCGGTCTGCCTTCAAACTCCTTCTATGGCTCTGGTTCTGTAGCACCCAGTTCCCAGAGCAGCTCACTTTTCTCCCATACCAGTGCAGCTCCTCCACCTAGCACCTCTCTTGGTTTCAGCAGCACTAGTGGATCTTTAGGTGTTGGATTAGGCTCTGCTCTTGGTGCATTTGGCTCCTCAGGTCAGTTCCGCTATTTGCAAAGTCAACTTATGATGTGCCGATCACATTTTAGTCTACGAAAATGGTTTTGATAGAGAGCCTTAGTCTTGTTTTGATTTTTCTAAATCATTTTGTTCTCATTTTGTACTTCTGTTCACTGTTCTTCTTATTCTTTTACATTTGCAGTGTCCAGTTCCACTAACAGCAGCGCAGTTCGTCGGGACTCACTTTTGGCCAGTTCAGAGCTGTATAAGCGGGGTGGCGGTGGCAGCTTGACTCCCATCGGCCAGTCTTTT
Associated Phenotype:
Not determined