ZMP
zgc:171813
Ensembl ID:
ZFIN ID:
Description:
protein ARV1 [Source:RefSeq peptide;Acc:NP_001107083]
Human Orthologue:
ARV1
Human Description:
ARV1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:29561]
Mouse Orthologue:
Arv1
Mouse Description:
ARV1 homolog (yeast) Gene [Source:MGI Symbol;Acc:MGI:1916115]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa25130 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa36951 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa25130
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000113184 | Essential Splice Site | 72 | 239 | 2 | 5 |
Genomic Location (Zv9):
Chromosome 20 (position 4088885)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 4031154 |
| GRCz11 | 20 | 4000455 |
KASP Assay ID:
554-7793.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTGCAAAATCCAGGCGTTTAGGCATATCCTCTTCAACACTGAGATTAATG[T/A]GAGTAAAACTCATTTTTATTCATTAATTTTGCTTCAGCTTAGTCTCTATT
Long Flanking Sequence:
GTTCAGGTGTGTTTGATTAGGGTTGGAACTAAAATCGGCAGGACGCTGGCCCTCTAGGAACAAGTTTGGTGACCACTGTGATACAGCATCTGGGGGTCTGTGGCATACAAAAGATCCAAAACCCATGTTAAAAGCAAATGGTTTTAATTAAAATAAATAAATAAATAAATAAGCAAATGTGATATACTTACATTTTTTTGTTTGTTCTTACTGAAACAATGGAGTTTTTGTATGCCACATACCCCCAGATACTGTATGATCATCCTTATAGGAGGAAGCCCTGTAACACGCACAGATTATTTTATTTTAGTAAACATACATTTGTAGTTTGCAAATTCAACTGAATTCTGTTTGTTTTTTTGTTTTTCTTTCTTTGCAGAGTTCCTGTAGGAAGCCAGTGGACAAATACATCGAATATGATCCAGTAATTATTCTGATAGATGCCACTCTGTGCAAAATCCAGGCGTTTAGGCATATCCTCTTCAACACTGAGATTAATG[T/A]GAGTAAAACTCATTTTTATTCATTAATTTTGCTTCAGCTTAGTCTCTATTTCAGAGGTTGCCACAGCGGAAGGAACCGCCAACTACTCCAGCATGTTTTACGCAGCTGATCCCCTTCCAGCCGCAACACAGTACTGAGAAACACCCACACATACACTCATTCACTCACATACACTACGGTTTGGTGCACAAGTTTGGTGATCCCTGATATGGAACATACATTTCTAACGGCGGCGTAGTGAATACAAATGTAGTACATACTCGAGTGGTAGGCGATTTCGGACGCAGCCATAGTCTTGTATTGTGTGGACAGCCTGTGTTCTGTTCTATCACTCTCTGTTTCTGTAGATCCACTGGAAGCTGTGTGTGTTCTGTCTGCTGTGTGAAGCGTATCTGCGCTGGTCTCTCCTGCAGGGCTCTCAGTCCAGCAGTGACCCCGCCGATATCATCCGCTACACCAAAGAATGGGAGTTTTACTGCATGTTTGCTCTGGCGGCTCTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa36951
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000113184 | Nonsense | 194 | 239 | 4 | 5 |
Genomic Location (Zv9):
Chromosome 20 (position 4084935)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 4027204 |
| GRCz11 | 20 | 4004405 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCCCGCTCTGCTTCAGCCTCATACGACTCTTCGTTCTCACCTCCAATTCA[C/T]AAGCCATACGAGGTGAATATCCTCAAACACCCGCTCTTTTACAATCCACA
Long Flanking Sequence:
TCTAATGCTTTCTAATGTGTATTTGATTTTAACTAACATATAAATGTATTATATTTTGCACTCTACAGTCACTCTTATTTGATAGGCTAATATAATAACGTCCTATGGCATTGGTTTTGCTAACAGCAGGTATTTATAACCTGTATTAACACATTTGAATCAGTTTTATCTGTTTTTAATAACTTATATTTTTTGTTGTTTTCTTATACTTGTTTCTTTTATTACACTTTGTATTACCGTTGTGTATGAAATGTGCTATATCAATAAACCTGCCTTGCCTTATGTTTCCAGAGCTGACTGTGTTCTTCATCGGGGTGCTGGTGATTCTCTGGATGGCGCAGTGTTTCTCTGGCGCGTCTTTACAGTTCGCTCCTCTTCTGAAGGCTCTTCTGCTGTCCAGCTTTGGCAAAGTGCTGCTGATTCCAGCGGTGATCTGGGAGCATGATTTCTCCCCGCTCTGCTTCAGCCTCATACGACTCTTCGTTCTCACCTCCAATTCA[C/T]AAGCCATACGAGGTGAATATCCTCAAACACCCGCTCTTTTACAATCCACACATTAAGGCACAACCCCAATTCTATATTATACTGTACATCTATATACATGTGTCTCATACTCTACGTCTTTGGCTAAAACTTCACCTTCCCCTTGGCCGTTGAAACAGAATAAGAAAGCGTAGGCATAGAAATTTACTAGCATAGAAGCTAATGAATGTTGCGTGCTTTGCTAATGCATCAATTTTCCATCCATACATACAGAAATTAAGTGTAATGCACTGAGTGAGCATTGCCGCTAGTCTTCCGTATGAATGAACTACAAACCTTGCGAATCCTGATGTCATGCGCTCCAGCACAAAGACAGTTGATACAGTGGTTGCCTAGTAACATAAAAAGCACAGCGCATTGCTCTTTCAAACAAAAGGCAGTGTGTTGTGTCTTGTGTACAAGCCTCTGGGTGTCACAATATATAAACTAAATATAAACTGCAATAATATACGTATTTACAC
Associated Phenotype:
Not determined