ZMP
vars2
Ensembl ID:
ZFIN ID:
Description:
valyl-tRNA synthetase 2, mitochondrial (putative) [Source:RefSeq peptide;Acc:NP_001124133]
Human Orthologue:
VARS2
Human Description:
valyl-tRNA synthetase 2, mitochondrial (putative) [Source:HGNC Symbol;Acc:21642]
Mouse Orthologue:
Vars2
Mouse Description:
valyl-tRNA synthetase 2, mitochondrial (putative) Gene [Source:MGI Symbol;Acc:MGI:1916165]
Alleles
There are 5 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa23537 | Nonsense | Available for shipment | Available now |
sa15493 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa23537
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000079251 | Nonsense | 101 | 1057 | 4 | 30 |
Genomic Location (Zv9):
Chromosome 19 (position 27930405)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 19 | 27860517 |
GRCz11 | 19 | 27444740 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGCCCTTCCCACAATCCTACAGCCCAGAGTATGTGGATTTTGGCTGGTA[T/A]CAGTGGTGGGAGAAACAGGAATTCTTCAGTCCCGAGCAGCATGTAAGAGA
Long Flanking Sequence:
TTTTACAGGACGTGAATGATGATGGACTGAGCTGGTCAGATAAAGAAAAAATAAAGTACACAGCTAAACTCTCACCTGGAGAGAAGAAAGGTGATGTTTTTTTTTGTCTCTTCCTTTTTGTGTTTTTTTTTTGTGCAAAAAAAAAAAAAAAAAAAAACATTCTGTCATTTAGTCACCATCCACTTAATATTTATTTCCACTATTGAAGATATTTTAAAAAATGTTGAAAACCGTCAGCTATTATTTTTCCTAGTATGGATGTTAATGGCTGCAGATTTCCAACATTCTTAAAAATATAATTTTTGTGTTCAACAGAAGGTAGATTAGAAATTAGAAGGTAGTAAATGAATTTGACCGAATGTTTTGGATGGCGTTTGAGTTTGATGTCACTAATGCAGTTATTAGAGATGGCTATAATCCCTTTATATATCCTCTGTTTTAGACACCACTCTGCCCTTCCCACAATCCTACAGCCCAGAGTATGTGGATTTTGGCTGGTA[T/A]CAGTGGTGGGAGAAACAGGAATTCTTCAGTCCCGAGCAGCATGTAAGAGAGTCTACTTTAATTATTTTAAAATCTAAAAAAGGTACTACTTCCATTTTGTTATGAAATTGAAGGCTTAACTATGCAAAAGGGTCAAAGATGAAAACCCTTTTTTTATTACTGTTTATTAGAAGCCCTCATTGAAATCTTATTGAGTTATTCATTTTTCTTTGGCTTAGTCCCTTATTTATCAGGGGTCGCCAGCATATGTTTTATTCCAGCAAATGTTTTACGCAGTGAATGCTCTTCCAGTAGCAACTCCGTACTGGGAAACACCCATACACACTCACATTCACACACACAATCATAAACTACGGCCAATTTTTGTTTACCTATTTTACCAATAGTGCATGTCTTTGGACTGTGGGTAAAATCGGAGGAACTGGAGGAAACCCAAGCAAACATTTGGAGAACAACTCCACACAGAAATGCCAAACCAGTGACCTTCTTCCTGTGAGGCG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa15493
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000079251 | Nonsense | 548 | 1057 | 18 | 30 |
Genomic Location (Zv9):
Chromosome 19 (position 27913827)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 19 | 27843939 |
GRCz11 | 19 | 27428162 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
KTCATGAGCAGGAGCATTGGGTTYGGGGCAGAAGTGCTGCAGAGGCTCAA[C/T]AGCRTGCCASTATAAAGTTTGGAGTGAATCCTGAGGCCATCWCACTCACA
Long Flanking Sequence:
CAAATCTTGAAATAGATTTTTCTGAGAATTTTACTAAAAAAGGTAAATAAATACAGTGGACAGCTGCATTTTCTTAAAATCGTTTACAGATTGTATTTATGACATCCACTTTTTGTTTTTTGCTCAATGAAAACTCCCATACTGCTGATATTTTGTCTTATTTTTAGAATAAACTCTTCCAAAGGCACAAATGAAAACCCCAAGCAGCACATGTAAAGTGGAAATAATCCATGATTTTTTTTTATCAGCTGTTTATTTTCTTGTTGCATAATGCTGACAACTTCAAAAATCTGCGTTTGTTGTCCAATACCGATATGAAGGCCTTTTGTGCATACCTATGATGATGATATCATTTTAAATTTTATATAGAAATCTTTGTGAAAATATAATCTGACATCTGCCCTGATTTGATCTGCCCTCTACCTGTTTTTTATGACTGTTCTTCACTGTGTCATGAGCAGGAGCATTGGGTTTGGGGCAGAAGTGCTGCAGAGGCTCAA[C/T]AGCGTGCCACTATAAAGTTTGGAGTGAATCCTGAGGCCATCACACTCACACAGGGTGAGCATCATTGAGTTCACTTAATCTACACTTTTGTCTTTATGATTATTATTATGTGTGCTGAAGAATATAAACATACAATGATAAATGTAGCTAGGCAAACTGTGTTTAGATTTTATTAAGAAGAAGTTAAATAACTGCTCTGGCTTTATATCTTTTATGCGCTGTAGCAGTAGGAAAATTGCATTAATTTGTGTAGTTAAAAATTATTTTTGTTTTATAAATAAACCTACTCTCTGCGTTTGGTTATACACATGTAAAAACATGTCCACATTGAAACATACAGTGAGCGTAAACACCTTTTACAGCAGGTTTATTTCACAAACAATTCACAGTAAAGATTACATTAATAATTATAATACAAATATATAAAAAATACAATATATAATGCACAAATATATAAGTATATTGTATAATACAATATACAAATATAAAAAAATACTATA
Associated Phenotype:
Not determined