ZMP
gabbr1b
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate gamma-aminobutyric acid (GABA) B receptor, 1 (GABBR1) [Source:Un
Human Orthologue:
GABBR1
Human Description:
gamma-aminobutyric acid (GABA) B receptor, 1 [Source:HGNC Symbol;Acc:4070]
Mouse Orthologue:
Gabbr1
Mouse Description:
gamma-aminobutyric acid (GABA) B receptor, 1 Gene [Source:MGI Symbol;Acc:MGI:1860139]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa36851 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa6561 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa36851
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000045616 | Nonsense | 601 | 994 | 15 | 24 |
| ENSDART00000143919 | Nonsense | 388 | 778 | 10 | 18 |
Genomic Location (Zv9):
Chromosome 19 (position 27563514)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 19 | 27493626 |
| GRCz11 | 19 | 27077849 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTCACAGAAACTCTTCGTCTCTGTGTCTGTTTTCGCTGGCTTGGGCATTT[T/A]AATGGGGATTGTTTGCCTCACCTTTAACATCTACAACAGCAATGTCAGGT
Long Flanking Sequence:
AATATTATTTACTTTTAAGCATTTTTTAAGTTTCTTCTAAATAAAAAGAAAATAGTAAAACCAGATATTTTGTTTTGGAAAAAATGTTGCTTTTGTGTGTTTTTTTTTTTTTGTATTTAGTTTTCCTTTTATTTATTTTTTTATTTTTGTCTGGCTTTGTTTGTAGCTTTAATTCAGTCTTCTGTTTGGATTTTAGTTCTTCTTAGCTTAGTAAACAAATACGTACAAAAATATGTATAATATTTTACATTCATTCTCATCTATGAGGTGCAGATTTCCCTCTTTCTCTCTGGTCTTTTTTGTTTTGCATCTGCTCAGTAGAAAGACTAAATACACAAATCTGTTTTCAGCTTATTTCAAAACAATTTTATTATAAAAAGCCTCATTTCTCTCTCCAGGTTCTGGCCCACCTGCTGATCAGACAGTGGTGATTCAGAAGTTCAGATATCTGTCACAGAAACTCTTCGTCTCTGTGTCTGTTTTCGCTGGCTTGGGCATTT[T/A]AATGGGGATTGTTTGCCTCACCTTTAACATCTACAACAGCAATGTCAGGTATGCTTAGCTGTGAATGTCCATTTGTCTCTTGCTGCTCGTAAGCGTGTGTGTTTATATTGCATACCCGCATGTGAGTTCAGCTCAGAGGATTGCATGCTATGTGCATATAATTAACTGGTGTTTTTAAAGGTCACTTTCATACATTCATGCATTATGTGTGCTCACAAACAAGCTGGGTTTAAAAATGAAAGGCTAATGCATTAAGAATAGCAAAATTGTTATGAGCTTATTCAAACTCCACAGGCAGATTTAGAATACTGTTTGTGTTTTTAGTCTTTTATTGTGTTGATACTAAATTTTCACAGCAGACAGCTTAAGCAAATACCCCAACCACTCACAAATCTTGTCAAGCATGTGGTTAAATGTGTTACAGCTATTATCTATGTTTCTTTTTGTGATTTAAAATATGAAGAAGGTTAAGTACTATTCCACTTTGCGAGATTAAATTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa6561
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000045616 | Essential Splice Site | 811 | 994 | 20 | 24 |
| ENSDART00000143919 | Essential Splice Site | 598 | 778 | 15 | 18 |
Genomic Location (Zv9):
Chromosome 19 (position 27540195)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 19 | 27470307 |
| GRCz11 | 19 | 27054530 |
KASP Assay ID:
554-5074.1 (used for ordering genotyping assays)
KASP Sequence:
AAAAATTAACGATCATSGAGCTGTTGGGATGGCCATCTACAACGTCTCGG[T/C]GAGTCTGTTCGTCTTTTTAAACTTTACCCTGCGGATTTTTAAAGAGCACC
Long Flanking Sequence:
GGTTGTTGGGAGGGAGAATGGGGGTAAAAAGTTTGCTGTGCCTTCATGATTTTTATTCTGTAATTCTGTAATCTGTTGTGATATGCAAATAAAAAAAGTAATAAATATATTGTACAAAAAAAAATTGTGGATGCCCATATGCCCTAAGTGCCCCAGCACAGTGCGCTTTAGACGATGCACTTAATCATTAAAATAGAGCCCATAATAGTCACATTTGATTAATTCAATTTAATTTCTTCTTCAGAAACAAACACTATAAGTAATTAAGCATAAAGTATTTTATATGCACTGACATTGGCTCCATCAGTAGTGATAGTTGAAGTGATTTAAGATGGAACCTGTGTTTTATTTTTGTCTGTTTTGTCATTTAGGTGTTGTGTATGGCTATAAAGGTCTGCTGCTGCTTCTGGGTATTTTCCTGGCATATGAAACCAAGTCTGTGTCCACTGAAAAAATTAACGATCATCGAGCTGTTGGGATGGCCATCTACAACGTCTCGG[T/C]GAGTCTGTTCGTCTTTTTAAACTTTACCCTGCGGATTTTTAAAGAGCACCTTGGGTGACATTTGAAATGTCAGTTGTCACCCAAGTATTGTCCAATTAAAAGGTAGAATCGTTGGACTGACGTGACTGAAATAGCACCGCAGAGTGGTTTATTTTTTTTTCCGTTGCTCAAGTTTAGCTGGGAGTTGGCGTGTGAATTGGACGCAGCGTCCGTCTGGAGCTGTTGTGTGTCACAACACAATCATAAGCAGGAAGAACATGCCTAAAGCTCTTCAGAAAGGCTCTGGTAGATTTGATGGAAGTGAAGTGTCTGAGCCTGCCATCTCGAATGCTGTCAAGGGATGCAGAGATTTCCAGAGGACAGGGAATGGGGAGGGGGTTGGGGAAGAGCTTCTCCTCATCACCGAGAATAAGCTTACATGTCAGCTTGACAGGACTGGAGCTCAAATCTCAAGTAAAGTGGTCCCTCAGTATTGTTGAAAGTTGTTTGTTTTTGCTCAT
Associated Phenotype:
Not determined