ZMP
jarid2b
Ensembl ID:
ZFIN ID:
Description:
Protein Jumonji [Source:UniProtKB/Swiss-Prot;Acc:Q1LVC2]
Human Orthologue:
JARID2
Human Description:
jumonji, AT rich interactive domain 2 [Source:HGNC Symbol;Acc:6196]
Mouse Orthologue:
Jarid2
Mouse Description:
jumonji, AT rich interactive domain 2 Gene [Source:MGI Symbol;Acc:MGI:104813]
Alleles
There are 7 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa10625 | Essential Splice Site | Available for shipment | Available now |
| sa9905 | Nonsense | Available for shipment | Available now |
| sa36846 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa10625
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000089836 | Essential Splice Site | 100 | 1303 | 4 | 18 |
| ENSDART00000147627 | Essential Splice Site | 85 | 1304 | 3 | 17 |
Genomic Location (Zv9):
Chromosome 19 (position 26597050)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 19 | 26527162 |
| GRCz11 | 19 | 26111385 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
YAGAGGGCAAGTGTATTTAAAATCTATTGTTTNNTCTCTNTTTTTTTCTGTTC[A/T]GGCCCAGACTGCATGCACAGAGRARGTTTGCTCAGTCTCAACCCAACTCT
Long Flanking Sequence:
ATTGTGCTTCCATGAGGTAAAGTTTAGTCTGAATATTGCCAACATTCCACTATAACTGCATTATGAGAGTGCATGTAAAAAAGATGTTTGGGTGAACTATCTGTTTAAGATTGCATTTTTACATGTTATCAGTAGAAGATTAAACGTGTTAATAAAAAACAAAAAAAAAAAAAACAGTTTTTGTAGACTGTATCGTTTTAGTGCTCAATTCAGTGATCAACATTTAAATGATTATTATAAATAGCTGCTCTTGTCTGCTAATCAGACCAAAAACGTGTTTGAATTGGATCCAGATAGACAAAATTAGTCATGGCAACAGGCAGTGTAGTTTTAGCATCATGAGAACAAATGCACTAAGAGAAATTTGTTGCTCCGGGTATTACTTGAGTCCCAAAAGGATTAATACAATGCATTTAAGCAATGTATACATTAAGTATTTGTTATATAATATAGAGGGCAAGTGTATTTAAAATCTATTGTTTTCTCTTTTTTTTCTGTTC[A/T]GGCCCAGACTGCATGCACAGAGGAAGTTTGCTCAGTCTCAACCCAACTCTCCCAGCAACACACCAGTGAAGATGGCTGACCCCTCTCTGCCCACACCGCTCACACACATCACATTCCTCTCCAGACGCAAACCCAAGACAGAAGACTTCCTCACCTTCATATGCCTACGAGGTATTGCTTCGTTTTTCATTACCTTGCTAAACATTCAGAGTTGTGTTATAGAACAAATAATATTGTTATTAAATTTTTATTTTATTTTTTATTAGTTTTAATTTAAATTTGGTTTAATTTTTATTTTTTTATTTTTTTGTTCATTGAAATACATTTCTGGATGATTTTAGTCTCTATTGAACAGCACCACAGTATTCTTACTGTTATGGCAAACAGCAATGCACCATTTTGGTTCAAGTTGGGGACTTAACATGGCATAACACACTGGATTCTGTTTAATGTCTTATAAATGTGTCATTGCTCCTTAGTATAGCAATAAATTGCAACTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa9905
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000089836 | Nonsense | 531 | 1303 | 7 | 18 |
| ENSDART00000147627 | Nonsense | 516 | 1304 | 6 | 17 |
Genomic Location (Zv9):
Chromosome 19 (position 26623002)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 19 | 26553114 |
| GRCz11 | 19 | 26137337 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTCCAGCTTCCCCGTCCATGCCCCAGAACCCTGCAATCCCTGAGCCAGCA[C/T]GACAGCGACCCAAACGTGCCTCTGCTGGCAAACTGATGTTCATCAGAAAA
Long Flanking Sequence:
GCAATGGCCATGGCCGGCCCCAGCTCTCTCACTCAGGAAAAGCCCAAAGTATCAATGCAAAAACCCGCAAACAGGTGCTATTGTCGAATGGGGTGCATAAGATGACTAATGGGAGCCGGCTTAACGGCAGGCTAAATGGACGCCATAGTGCCAGGGAAGAAGAGGTTGTTGACCGACCAGTGCGGCAAGGACTGCGGAACTCTAAACGCAGAAGTGATGCCATGACATTGCTTGGAGCTGTAACTGAGAGTGAAGAGACTAAAACTAAGCAGCAAACCACTGAGGTTAAGAAAGCTAAAGTGCAGCCTAGCCCACTTGAAACTCGCAGCAAGAAAGCCCTGAATCAGTTCAAGTCCCCTAACATAGTCACTATTGCACATAGTATCACTGAAATGGCTGCCTCCCCTATTCAGAAAACGGGTCCTGCTCCTCCTCCATCTCCCCCTGCTGCTCCAGCTTCCCCGTCCATGCCCCAGAACCCTGCAATCCCTGAGCCAGCA[C/T]GACAGCGACCCAAACGTGCCTCTGCTGGCAAACTGATGTTCATCAGAAAAGCACAGCAGAGGGCCCAAACTAATCCTACCCTCAACCGGACCACATCCACTACCTCAGCCAGCAAGTCCTTCAAACCAGCAGAGCCCACACACACACCTCCACCTCGGCTGGACAGAGACAGGGAGCGTGAGAGGGAAAGGGAGAGAAGCAGGGCAAGGTATGCAGCCTTGGGGGATGTGCCCATTTTTAAGCCCAGCTCCAGGGAGTTCCAGGACCCTTTGGTGTACCTAGACTCATTTCGGGAACAGGTCGAGTCATGTGGACTGTGCAGAGTGCTGCCTCCTACTGACTGGAGGCCAGAGTGCAAACTCAATGATGAGATGCGTTTTGTGACACAGGTTCAGCGCATACACAAGCTGGGCAGGCGTTGGGGGCCCAATGTTCAAAAACTTGCCTGCATTAAGAAGCACCTCAAATCTCAGGGCATCTCAATGGATCAGCCACCTGTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa36846
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000089836 | Nonsense | 688 | 1303 | 7 | 18 |
| ENSDART00000147627 | Nonsense | 673 | 1304 | 6 | 17 |
Genomic Location (Zv9):
Chromosome 19 (position 26623473)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 19 | 26553585 |
| GRCz11 | 19 | 26137808 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGGGGCCCAATGTTCAAAAACTTGCCTGCATTAAGAAGCACCTCAAATCT[C/T]AGGGCATCTCAATGGATCAGCCACCTGTTATAGGCAAGTCCTTTAAATCC
Long Flanking Sequence:
CCCAGAACCCTGCAATCCCTGAGCCAGCACGACAGCGACCCAAACGTGCCTCTGCTGGCAAACTGATGTTCATCAGAAAAGCACAGCAGAGGGCCCAAACTAATCCTACCCTCAACCGGACCACATCCACTACCTCAGCCAGCAAGTCCTTCAAACCAGCAGAGCCCACACACACACCTCCACCTCGGCTGGACAGAGACAGGGAGCGTGAGAGGGAAAGGGAGAGAAGCAGGGCAAGGTATGCAGCCTTGGGGGATGTGCCCATTTTTAAGCCCAGCTCCAGGGAGTTCCAGGACCCTTTGGTGTACCTAGACTCATTTCGGGAACAGGTCGAGTCATGTGGACTGTGCAGAGTGCTGCCTCCTACTGACTGGAGGCCAGAGTGCAAACTCAATGATGAGATGCGTTTTGTGACACAGGTTCAGCGCATACACAAGCTGGGCAGGCGTTGGGGGCCCAATGTTCAAAAACTTGCCTGCATTAAGAAGCACCTCAAATCT[C/T]AGGGCATCTCAATGGATCAGCCACCTGTTATAGGCAAGTCCTTTAAATCCTCTGCATTTAGATCTGCTTTTGTTTGTATAGGTCAAATCAGGACATGGAACACCACTGCACTGCAGAATTTAAGGCAGCCTCTCCTATGTATAATTTTCTAGCACCTAAAGCATTAGACCAGGGGTGTCTAAACTCGGACCTGAAGGGCCAGTGTCCTGCAGATTTTAGCTCCTACTTGCCTCAACATACCTGCAAGGATGTTTCCAGAAAGCCTTGTAAGAGCTTGATTAGCTAGCCCAGGTGTGTCTGATTGGGGTTGGAAGTAAACTTTGCAGGACACCGGCCATCCAGAACAGAGTTTGGGTACCCCTGCATTAGACACTATAGAGCACTGATACTACAAGGATAAGTTTGAGGGTCTAGAGTAAAGATGACCAAATATACTAGCAGCACTGCTTTGTAGTATTGTACCCTTGTCAAACATGTCTGAAAATCTTATCAGAATATTT
Associated Phenotype:
Not determined