ZMP
nr1d2b
Ensembl ID:
ZFIN ID:
Description:
nuclear receptor subfamily 1 group D member 2 [Source:RefSeq peptide;Acc:NP_571140]
Human Orthologue:
NR1D2
Human Description:
nuclear receptor subfamily 1, group D, member 2 [Source:HGNC Symbol;Acc:7963]
Mouse Orthologue:
Nr1d2
Mouse Description:
nuclear receptor subfamily 1, group D, member 2 Gene [Source:MGI Symbol;Acc:MGI:2449205]
Alleles
There are 2 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa36820 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa5921 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa36820
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000127353 | Nonsense | 67 | 578 | 2 | 8 |
The following transcripts of ENSDARG00000009594 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 19 (position 19390480)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 19 | 17943615 |
GRCz11 | 19 | 17402180 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCATGTGGCCTCTCATTCTCGCCCACCAAGGCATGGTGGAGGGAAAGCA[C/T]GATCACTCTCCTCCACCAAAAGTGGCATTACAAGTAAGTGACTATATTAA
Long Flanking Sequence:
TACGGAGAGCACAGAGTCAAGTCCACTTTCTGGTCATATAAATGGCTGTACTTTTAAATAAATCTTAAGAACAAAGAAAACTTGTTTTGTTTTTTTATACGGATTGCATCTACTCTGTATCTATTAATATTGTTGTATTAACAATGACAAAGGCTGTTATATGTCAGCAGTTATATATAAAAGTTTAAAACAACATTTTGCTCATGTTTTATACTCAGTTACTTCATAATAGATATGTACATATTAGGATCCATGTAATTTAGAAAACAGCAAGCCTAACAGAAGTCTTCTTGTCTTGCTCTTTTGTGTGTCATCCACCAGGTGGAGTAATAGCTTACATTAGCTCCTCAAGCTCAGCCTCCAGTCCAGAGTCGTGCCACAGTGACTCCTCCAACAGCAGCTTTCAGTCCTGCTCTCCACCCCATACAGGGCAGGGCCAAGGCGAGACCCTTCATGTGGCCTCTCATTCTCGCCCACCAAGGCATGGTGGAGGGAAAGCA[C/T]GATCACTCTCCTCCACCAAAAGTGGCATTACAAGTAAGTGACTATATTAAAATCTGGTTAAACAGAACAAGAAATGCTTTCATACTAGAAGCAAACATTTTTAAGATTAACATAATGTAACATTCATTTTTAATGTTACTGCATGAATATATATGATTTATTTTCCTATCCTAGCAAAAGAAAAACTTTATTGTATTGCCTAAACATTCATTCATTATTTTGCATTCCCTATTATTTATTTTATTTTTAATAGTAAAGTATGCATCTATGCTTAATAGCAGGGAGCTCATAATGCAAACACAGAAACAGACTCAGAAAATTGCTATGCTTTGCATTTAAACTGTTTGCTTCATCATGAAGTAATGGTCTAGCTATTCGAGGAAACGGAAAATAGTCAAACAGAGCGCAGAGTATTCCTTATCTCATTTTCTGTATTTCTGCTCCTGCAGAGATTAACGGTCTGGTGCTGCTATGTAAAGTGTGTGGAGATGTGGCGTCAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa5921
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000127353 | Nonsense | 311 | 578 | 5 | 8 |
The following transcripts of ENSDARG00000009594 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 19 (position 19392567)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 19 | 17945702 |
GRCz11 | 19 | 17404267 |
KASP Assay ID:
554-3777.1 (used for ordering genotyping assays)
KASP Sequence:
AGACTCAGGAGGTCTTGAACYACCAGAACAATGTGTCCTCAGTAAGTGAA[C/T]AGAATCCACAGTCGAGCTGTGGTCCACAGGGTCCTGAAGACTCTGGTCAA
Long Flanking Sequence:
TAATGGTTGTGAATTGACTGTGTCTGTGCTCCTTAGCTGTGCGTTTTGGCCGGATTCCCAAACGAGAAAAGCAACGCATGCTGCTTGAGATGCAGAATGCTATGAACAATATGATGAACAACAGCCACGGCAACCAGTCCCTTAACAACCAGACTTCAGCTGCTGATGGCACTTCTGAGGATGGCACTTCTGAGGATAGTACTTCTGGTCCTTCCTCTCGATCCCCCTCAAGCTCACCCAGGAGCAATCGATCTGAATCCAGCCCAGATCCTGAGCTGCAGATTGCCATGGATACAAGCTCAAGCTCAGACTCATCCAGTGCTACTGACAGTGGAGAAGAGGAGGTTATTGGCACAGTCACTAGGGCACATCAGGAGACATTCATGTATAATCAGGAGCAGGGCAGTATGGCTTCAGAGGCGCTTAATAACTACAGCCATTGCACAGAGAAGACTCAGGAGGTCTTGAACCACCAGAACAATGTGTCCTCAGTAAGTGAA[C/T]AGAATCCACAGTCGAGCTGTGGTCCACAGGGTCCTGAAGACTCTGGTCAAGACTACAGTACTCTGAGCAGCTGTCCAGTCCGACTTTCCAATAACAGCTCCAGGGGACCATCTCTGCAGACCCTTACTTTTAGAGCTCACAATGATCATGAAACCCATGCCAATGGCAGCTATATTGTCCCAACATTTCCAAGAGCAAACAGGATGCACCTGGTGAGTACCAGTACCAAAAGAGCAATACCAAAATTTCAGTTGTCCATTCTGAAACTTTCATGATGCTATTTTACAGGTCTGCCCGATGAATACATCACCATATGTAGATCCTCAGAAATCAGGTCACAGTATTTGGGAAGAATTTTCCATGAGCTTCACACCAGCTGTCAGGGAGGTGGTGGAATTTGCAAAGCGTATTCCAGGATTCAAAGATCTATCCCAGCATGACCAGGTCAGCCTGCTCAAGGCCGGCACCTTTGAGGTATGAACCAAATACAATGCAATGTT
Associated Phenotype:
Not determined