ZMP
clic1
Ensembl ID:
ZFIN ID:
Description:
chloride intracellular channel protein 1 [Source:RefSeq peptide;Acc:NP_997847]
Human Orthologue:
CLIC1
Human Description:
chloride intracellular channel 1 [Source:HGNC Symbol;Acc:2062]
Mouse Orthologue:
Clic1
Mouse Description:
chloride intracellular channel 1 Gene [Source:MGI Symbol;Acc:MGI:2148924]
Alleles
There are 2 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa36807 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
sa18538 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa36807
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000081810 | Essential Splice Site | 92 | 241 | 3 | 6 |
ENSDART00000081810 | Essential Splice Site | 92 | 241 | 3 | 6 |
Genomic Location (Zv9):
Chromosome 19 (position 16820457)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 19 | 17472233 |
GRCz11 | 19 | 18760162 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACACCAACAAAATAGAAGAGTTCTTGGAAGAAACACTCTGTCCTCCTAAG[T/G]AACTTACTTCATTATTGCATGCTTCATTTCCTTTCATTGTGTTGCTAGAT
Long Flanking Sequence:
AGAAGTATCTAAAGGATCACTTGGTAATTAAAGACAGGTGTTTTTGATCAATGTTACAGATAAACTCTGCAGGAAGGTTGATCTTCAGGAATAGAGCTGAACCCCCCTGGTCTATACACAGTCATTCTCTGAATTTGTGTATTTGTTTATAGGCAGGAAGTGATGGTCAGAGTATTGGAAACTGCCCGTTTTCTCAGCGGCTTTTCATGGTCTTGTGGCTAAAAGGCGTAACTTTTAATGTGACCACAGTTGACATGAAGAGGTTGGTTTTTCTGTTGCATTGTGTATCTTGAGCAGTGCACCTTTTTAATTGAAATGATTAACATAGAAATTTCCACCCTGCCAACTTCCTCTTTCTCTGTTTTGTGAGCAGGAAACCAGAAATTCTAAAAGATCTGGCCCCTGGTGCTCAGCCTCCTTTCTTGCTATATGGTACAGAGGTGAAGACAGACACCAACAAAATAGAAGAGTTCTTGGAAGAAACACTCTGTCCTCCTAAG[T/G]AACTTACTTCATTATTGCATGCTTCATTTCCTTTCATTGTGTTGCTAGATATCATCACTGTGCTTGTATTTGTATACTTATTATAACTGTATGGATACAAATCCTGATGTTGAACTTGTAATCATACTGTAACATGTATTTAAGTGTTTTTTCTTAAATGTGGGTAAAGTAATTATGAAATCAGAATACAAATACAAATTACAGTATGTAATTTTCAATCTTTAATTTTATAAATCAGGGATGTCAAACACAGATCACGAAGGGCCACAGCTCTACACAGTTTAGTTCCATTCCTGTTTCAACACACTTGCCTGTAGGTTTCAAACAAGCCTGAAGGACTCAATAAGTATGATCAATTGTGTTTGATTAGATTTGGAACTAAACTGTGCGGAGCTGCAGCCCTCCAGGAACTAAGTTTGGCACCACTGGTATGAAGCCATTTTGTCTATCAGAAGAATTAAATTTTGATTGGCCCTCAGTCTTCATTAGAACAGAAATGG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa18538
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000081810 | Essential Splice Site | 92 | 241 | 3 | 6 |
ENSDART00000081810 | Essential Splice Site | 92 | 241 | 3 | 6 |
Genomic Location (Zv9):
Chromosome 19 (position 16820457)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 19 | 17472233 |
GRCz11 | 19 | 18760162 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACACCAACAAAATAGAAGAGTTCTTGGAAGAAACACTCTGTCCTCCKAAG[T/A]AACTTACTTCATTATTGCATGCTTCATTTCCYTTCATTGTGTTRCTAGAT
Long Flanking Sequence:
AGAAGTATCTAAAGGATCACTTGGTAATTAAAGACAGGTGTTTTTGATCAATGTTACAGATAAACTCTGCAGGAAGGTTGATCTTCAGGAATAGAGCTGAACCCCCCTGGTCTATACACAGTCATTCTCTGAATTTGTGTATTTGTTTATAGGCAGGAAGTGATGGTCAGAGTATTGGAAACTGCCCGTTTTCTCAGCGGCTTTTCATGGTCTTGTGGCTAAAAGGCGTAACTTTTAATGTGACCACAGTTGACATGAAGAGGTTGGTTTTTCTGTTGCATTGTGTATCTTGAGCAGTGCACCTTTTTAATTGAAATGATTAACATAGAAATTTCCACCCTGCCAACTTCCTCTTTCTCTGTTTTGTGAGCAGGAAACCAGAAATTCTAAAAGATCTGGCCCCTGGTGCTCAGCCTCCTTTCTTGCTATATGGTACAGAGGTGAAGACAGACACCAACAAAATAGAAGAGTTCTTGGAAGAAACACTCTGTCCTCCTAAG[T/A]AACTTACTTCATTATTGCATGCTTCATTTCCTTTCATTGTGTTGCTAGATATCATCACTGTGCTTGTATTTGTATACTTATTATAACTGTATGGATACAAATCCTGATGTTGAACTTGTAATCATACTGTAACATGTATTTAAGTGTTTTTTCTTAAATGTGGGTAAAGTAATTATGAAATCAGAATACAAATACAAATTACAGTATGTAATTTTCAATCTTTAATTTTATAAATCAGGGATGTCAAACACAGATCACGAAGGGCCACAGCTCTACACAGTTTAGTTCCATTCCTGTTTCAACACACTTGCCTGTAGGTTTCAAACAAGCCTGAAGGACTCAATAAGTATGATCAATTGTGTTTGATTAGATTTGGAACTAAACTGTGCGGAGCTGCAGCCCTCCAGGAACTAAGTTTGGCACCACTGGTATGAAGCCATTTTGTCTATCAGAAGAATTAAATTTTGATTGGCCCTCAGTCTTCATTAGAACAGAAATGG
Associated Phenotype:
Not determined