Busch Lab

ZMP

clic1

Ensembl ID:
ENSDARG00000058858
ZFIN ID:
ZDB-GENE-030131-3202
Description:
chloride intracellular channel protein 1 [Source:RefSeq peptide;Acc:NP_997847]
Human Orthologue:
CLIC1
Human Description:
chloride intracellular channel 1 [Source:HGNC Symbol;Acc:2062]
Mouse Orthologue:
Clic1
Mouse Description:
chloride intracellular channel 1 Gene [Source:MGI Symbol;Acc:MGI:2148924]

Alleles

There are 2 alleles of this gene:

Allele Name Consequence Status Availability
sa36807 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa18538 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa36807
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000081810 Essential Splice Site 92 241 3 6
ENSDART00000081810 Essential Splice Site 92 241 3 6
Genomic Location (Zv9):
Chromosome 19 (position 16820457)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 17472233
GRCz11 19 18760162
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACACCAACAAAATAGAAGAGTTCTTGGAAGAAACACTCTGTCCTCCTAAG[T/G]AACTTACTTCATTATTGCATGCTTCATTTCCTTTCATTGTGTTGCTAGAT
Long Flanking Sequence:
AGAAGTATCTAAAGGATCACTTGGTAATTAAAGACAGGTGTTTTTGATCAATGTTACAGATAAACTCTGCAGGAAGGTTGATCTTCAGGAATAGAGCTGAACCCCCCTGGTCTATACACAGTCATTCTCTGAATTTGTGTATTTGTTTATAGGCAGGAAGTGATGGTCAGAGTATTGGAAACTGCCCGTTTTCTCAGCGGCTTTTCATGGTCTTGTGGCTAAAAGGCGTAACTTTTAATGTGACCACAGTTGACATGAAGAGGTTGGTTTTTCTGTTGCATTGTGTATCTTGAGCAGTGCACCTTTTTAATTGAAATGATTAACATAGAAATTTCCACCCTGCCAACTTCCTCTTTCTCTGTTTTGTGAGCAGGAAACCAGAAATTCTAAAAGATCTGGCCCCTGGTGCTCAGCCTCCTTTCTTGCTATATGGTACAGAGGTGAAGACAGACACCAACAAAATAGAAGAGTTCTTGGAAGAAACACTCTGTCCTCCTAAG[T/G]AACTTACTTCATTATTGCATGCTTCATTTCCTTTCATTGTGTTGCTAGATATCATCACTGTGCTTGTATTTGTATACTTATTATAACTGTATGGATACAAATCCTGATGTTGAACTTGTAATCATACTGTAACATGTATTTAAGTGTTTTTTCTTAAATGTGGGTAAAGTAATTATGAAATCAGAATACAAATACAAATTACAGTATGTAATTTTCAATCTTTAATTTTATAAATCAGGGATGTCAAACACAGATCACGAAGGGCCACAGCTCTACACAGTTTAGTTCCATTCCTGTTTCAACACACTTGCCTGTAGGTTTCAAACAAGCCTGAAGGACTCAATAAGTATGATCAATTGTGTTTGATTAGATTTGGAACTAAACTGTGCGGAGCTGCAGCCCTCCAGGAACTAAGTTTGGCACCACTGGTATGAAGCCATTTTGTCTATCAGAAGAATTAAATTTTGATTGGCCCTCAGTCTTCATTAGAACAGAAATGG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa18538
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000081810 Essential Splice Site 92 241 3 6
ENSDART00000081810 Essential Splice Site 92 241 3 6
Genomic Location (Zv9):
Chromosome 19 (position 16820457)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 17472233
GRCz11 19 18760162
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACACCAACAAAATAGAAGAGTTCTTGGAAGAAACACTCTGTCCTCCKAAG[T/A]AACTTACTTCATTATTGCATGCTTCATTTCCYTTCATTGTGTTRCTAGAT
Long Flanking Sequence:
AGAAGTATCTAAAGGATCACTTGGTAATTAAAGACAGGTGTTTTTGATCAATGTTACAGATAAACTCTGCAGGAAGGTTGATCTTCAGGAATAGAGCTGAACCCCCCTGGTCTATACACAGTCATTCTCTGAATTTGTGTATTTGTTTATAGGCAGGAAGTGATGGTCAGAGTATTGGAAACTGCCCGTTTTCTCAGCGGCTTTTCATGGTCTTGTGGCTAAAAGGCGTAACTTTTAATGTGACCACAGTTGACATGAAGAGGTTGGTTTTTCTGTTGCATTGTGTATCTTGAGCAGTGCACCTTTTTAATTGAAATGATTAACATAGAAATTTCCACCCTGCCAACTTCCTCTTTCTCTGTTTTGTGAGCAGGAAACCAGAAATTCTAAAAGATCTGGCCCCTGGTGCTCAGCCTCCTTTCTTGCTATATGGTACAGAGGTGAAGACAGACACCAACAAAATAGAAGAGTTCTTGGAAGAAACACTCTGTCCTCCTAAG[T/A]AACTTACTTCATTATTGCATGCTTCATTTCCTTTCATTGTGTTGCTAGATATCATCACTGTGCTTGTATTTGTATACTTATTATAACTGTATGGATACAAATCCTGATGTTGAACTTGTAATCATACTGTAACATGTATTTAAGTGTTTTTTCTTAAATGTGGGTAAAGTAATTATGAAATCAGAATACAAATACAAATTACAGTATGTAATTTTCAATCTTTAATTTTATAAATCAGGGATGTCAAACACAGATCACGAAGGGCCACAGCTCTACACAGTTTAGTTCCATTCCTGTTTCAACACACTTGCCTGTAGGTTTCAAACAAGCCTGAAGGACTCAATAAGTATGATCAATTGTGTTTGATTAGATTTGGAACTAAACTGTGCGGAGCTGCAGCCCTCCAGGAACTAAGTTTGGCACCACTGGTATGAAGCCATTTTGTCTATCAGAAGAATTAAATTTTGATTGGCCCTCAGTCTTCATTAGAACAGAAATGG
Associated Phenotype:
Not determined