Busch Lab

ZMP

barx2

Ensembl ID:
ENSDARG00000041098
ZFIN IDs:
ZDB-GENE-081104-285, ZDB-GENE-081120-4, ZDB-GENE-081120-4
Description:
Novel protein similar to vertebrate BARX homeobox 2 (BARX2) [Source:UniProtKB/TrEMBL;Acc:B8JMG1]
Human Orthologue:
BARX2
Human Description:
BARX homeobox 2 [Source:HGNC Symbol;Acc:956]
Mouse Orthologue:
Barx2
Mouse Description:
BarH-like homeobox 2 Gene [Source:MGI Symbol;Acc:MGI:109617]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa23384 Nonsense Available for shipment Available now
sa11113 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa23384
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000060219 Nonsense 202 268 4 4
ENSDART00000138806 None None 148 None 2
Genomic Location (Zv9):
Chromosome 18 (position 45789969)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 47347657
GRCz11 18 47343049
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTCCAACCAAACCTAAAGGCCGACCCAAGAAGAACTCAATCCCAACCACT[G/T]AGGAGATCGAGGCCCAGGAGCGAATGGAGGCCAAACTGGCAGAGGAGGAG
Long Flanking Sequence:
ATTATATAATTATTTTATTATATATAAAATATATTATTATCATCATCATATACTATTAATATTTTATTCTGTATTTATATTTAATTATTATACTTATTTGACTACTTACTGCTTTTATTATTGTATTTTCAGCCGTTATTTATGTTATGATACAGTGATTTCTACTGGTTGTATTCTCTGTTCTTTGTTCTTTTGTTTTGTTCTATTAAAGTTTAAAAAAAAAACTTATGTAAGGTAATAAATGCAATTTGCGCAAAAAAGATTCTAGGACAACTTGCTGCAGAGGTTATTGAGTTGACTCAACTTAAATTGAGTCAAGTCCAGTACTTTGGTTAAAAAGTTAAGTCAACTCAAAGCTGTGCAGCAAGTTGGCCTACAATTTTAAGCTTAATGAACTTTTTTTTAACATAGTGTGTGTGTGTTTTTAGGTGCTAAAAGGAGGGCACGAAGCTCCAACCAAACCTAAAGGCCGACCCAAGAAGAACTCAATCCCAACCACT[G/T]AGGAGATCGAGGCCCAGGAGCGAATGGAGGCCAAACTGGCAGAGGAGGAGAGGCTACATGCAGAAGTGGAGGACGAAGTTTTCCAGTCTCAACCTCAGGATCTCAGTACATCCGCCACATCCGCCGTCGAGTATGTCTGTCCAGAAAGCCCAGAGCGAGAGCAGGCACCGGCATCACCGTCAGAAGCAATGACCACCAGCTAAACGCCAGCAAACGCCAACACTGAAAAGACTTTGGAAAGACTTTTGAACGGCTTCCCGGGCTGATTTTGAGTTGTCAGTGGCTCCAGAAAGTAGAGCGATACTTTAGACACATAAAATGTGCGAATGTCATTGTCAAAACAACAAAACGTCAAACCTAGTGGCTTGTAAAACAAGAAAGGATTGAATAAGCACACTTCTTAAGAAAACATTTCACAGAATAAGCTTTTTTTCAGAAGCATTTTACAATAAGGTCTCATCGGTTAACATGAACTGACACTAAATACTCACACAGCATTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa11113
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000060219 Nonsense 254 268 4 4
ENSDART00000138806 None None 148 None 2
Genomic Location (Zv9):
Chromosome 18 (position 45790125)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 47347813
GRCz11 18 47343205
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GTACATCCGCCACATCYGCCGTCGAGTATGTCTGTCCAGAAAGCCCAGAG[C/T]GAGAGCAGGCACCGGCATCACCGTCAGAAGCAATGACYACCAGCTAAACG
Long Flanking Sequence:
GATTTCTACTGGTTGTATTCTCTGTTCTTTGTTCTTTTGTTTTGTTCTATTAAAGTTTAAAAAAAAAACTTATGTAAGGTAATAAATGCAATTTGCGCAAAAAAGATTCTAGGACAACTTGCTGCAGAGGTTATTGAGTTGACTCAACTTAAATTGAGTCAAGTCCAGTACTTTGGTTAAAAAGTTAAGTCAACTCAAAGCTGTGCAGCAAGTTGGCCTACAATTTTAAGCTTAATGAACTTTTTTTTAACATAGTGTGTGTGTGTTTTTAGGTGCTAAAAGGAGGGCACGAAGCTCCAACCAAACCTAAAGGCCGACCCAAGAAGAACTCAATCCCAACCACTGAGGAGATCGAGGCCCAGGAGCGAATGGAGGCCAAACTGGCAGAGGAGGAGAGGCTACATGCAGAAGTGGAGGACGAAGTTTTCCAGTCTCAACCTCAGGATCTCAGTACATCCGCCACATCCGCCGTCGAGTATGTCTGTCCAGAAAGCCCAGAG[C/T]GAGAGCAGGCACCGGCATCACCGTCAGAAGCAATGACCACCAGCTAAACGCCAGCAAACGCCAACACTGAAAAGACTTTGGAAAGACTTTTGAACGGCTTCCCGGGCTGATTTTGAGTTGTCAGTGGCTCCAGAAAGTAGAGCGATACTTTAGACACATAAAATGTGCGAATGTCATTGTCAAAACAACAAAACGTCAAACCTAGTGGCTTGTAAAACAAGAAAGGATTGAATAAGCACACTTCTTAAGAAAACATTTCACAGAATAAGCTTTTTTTCAGAAGCATTTTACAATAAGGTCTCATCGGTTAACATGAACTGACACTAAATACTCACACAGCATTTACTAATACGTTGTTAAAATCCAAATTAGAGTCAAGACACTACTGAAGATTTTAATATCATTTTTTAATCGTTTTTTTTATGTATAAATAAATAGACATTAAATATATATTAAAAATGCTCACTTTGTCTGCAATTATGATTTATAGTTATGTCTGA
Associated Phenotype:
Not determined