ZMP

lysmd2

Ensembl ID:

ENSDARG00000091771

ZFIN ID:

ZDB-GENE-040801-250

Description:

LysM and putative peptidoglycan-binding domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc

Human Orthologue:

LYSMD2

Human Description:

LysM, putative peptidoglycan-binding, domain containing 2 [Source:HGNC Symbol;Acc:28571]

Mouse Orthologue:

Lysmd2

Mouse Description:

LysM, putative peptidoglycan-binding, domain containing 2 Gene [Source:MGI Symbol;Acc:MGI:1917332]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa6530	Nonsense	Mutation detected in F1 DNA	Not yet available
sa36707	Essential Splice Site	Available for shipment	Available now

Mutation Details

Allele Name:

sa6530

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000127955	Nonsense	22	208	1	3

Genomic Location (Zv9):

Chromosome 18 (position 37854052)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	18	39435755
GRCz11	18	39416763

KASP Assay ID:

554-5285.1 (used for ordering genotyping assays)

KASP Sequence:

CTCCGGTGCTGCCTCCGTTGCGGGATGATGGAGGAGGGGGACGGTATGGA[C/T]AGCCGCTATTCCCCAGATCCCGGTCCGGTTCGGAGTCMGACAGTGAATTG

Long Flanking Sequence:

ACTCTAAATTAATTATAGAATTTATAAGTAAATACACACTCGCCAAATTATTATACTTAAATATGTTACCCAAAGTAGACTGCTGGATCTCTGAAACTTCTGAGCTCCAAACACTGCAAGGGACGCGACGCAAATGACGCGAGTTTCTGATTGGTCTACTGCCTTGCGACGTCATCCTGGAAGACGCTCACTGGACGGGTGTCATCATCACACGCGCGTGGATCAGGTTTCACTGGATGGAGCGCGTATCTCGCGCAGGCCTGCGGTAACGACAATGGCGACTGGAAAAATCCCTCACCTTTGCCGTTTCCTCTAAATATCACCGCTGGAAATGTGCTGCTCGGGGTGTGACGCTGGAAACATGTCTATTTATATATTGTGAGTAATACTAGTGTTTTTTTTTCGGGGAAGGCAGCTTTAATAATAACAGATTGAAGATGGCGGAGTTTTCTCCGGTGCTGCCTCCGTTGCGGGATGATGGAGGAGGGGGACGGTATGGA[C/T]AGCCGCTATTCCCCAGATCCCGGTCCGGTTCGGAGTCAGACAGTGAATTGTCGCAGAGTTTGGCCCGTACGAAAACGCGCTCGTACGGCAGCACCGCGAGCGTCACCGCGCCTTTAGGAGAGAAATACATAGAGCATCGCGTAACGGACGGGGAGACACTACAAGGAATAGCACTCAAATATGGTGTTACGGTAAGAATATAAGCCGCACATTAATATAATCGCACACAAATACAGGAAACCATGGCCTGGTCATCTGCACGAGTGTTGTTGTGCATCTTTTTTTGGCTGTATAGTCGCGACATTGACTGTGACTCAATCACTAGTAAGATGCATATCTAGACCATGTTTTTGGAACATTAATAAAGAAACCCTTGCAGCAATATTAATTTGCGTTCATATATCAAAACCTTGTGAGCACTTTGACAGCGTTGTGCATCATAAAAGTGTGCGTTGTTTTGGGCCATCACTGACGCACCTGCAGGTTTGGGCCAATCCCAG

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa36707

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

T > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000127955	Essential Splice Site	197	208	2	3

Genomic Location (Zv9):

Chromosome 18 (position 37856483)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	18	39438186
GRCz11	18	39419194

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TCAAACAGTCCAAGCTAGCCGCCCGCAAACTGAAAGAGGATGGTGGGAGG[T/A]AAATTAACTTTTGACCTGCTTTATAGTCTGTCTGCCTTATTTAAGAGATC

Long Flanking Sequence:

TTTTAAAGCAAATATTTATATAGTTTGGTTGGTTACACAATGCTGGCAATCTCTAAAACAAGCAAAATCTAGGTAGATGGGTTCATATTTAGGACTCCTTACTGGATATATGAAAGTAAAATGTAATAGTGTTGTATGTTTATAACTTTCCTTTATCTCCACAGATGGAGCAAATCAAAAGAGTCAATAAATTATTCAGCAATGACTGCATATTCCTGCGAAACACGCTCAGTATTCCAGTTAAGTCAGAAAAACGCTCTCTCTTTAACGGACTGTCTCTGGAATCGCCCGACAGTGAGGGAAACACACCTCAGGAGTCGCCGTGTGTGAGTCAGGATGTGGACGCTCCATCGCCCCCACCAGAACCATCCGTCCCGGAGCCCAACACCCGGCCTGTGCAGGCGGAGGAGCTGTCCGCTAAAGACTACTTACACCGGCTGGACTTGCAGATCAAACAGTCCAAGCTAGCCGCCCGCAAACTGAAAGAGGATGGTGGGAGG[T/A]AAATTAACTTTTGACCTGCTTTATAGTCTGTCTGCCTTATTTAAGAGATCAAAAGATGTATTAATCGTAAATGGAAGCTCTGTTCCAAAAAGAGTAAGCTATAATCTAGATGTTCAAGTAAGACATCTAGCTGTGTGTGCTCTGTGTATTGGTTACCTTCTAAAGACGTATCTTAAAAACTGTACTTCTTTTACTCCTAAAGAAGTAGGCTTCTTCACTCACACAGGTGTGTGGGCTTGACAAACCCCCTGTAAGAAACACACTATTTTATCTGTCATTTTAACGGACATGTGCATCAGTTTTGTACATTTGCATTAGACATTTTTTTGCGATCACTCAAGAAAAAAAAGGCATTTATGAAGTGAGCTTTACACAGGTGAGTGGGCTTGACAAACCACCTGTAGAAACGCTCTTCTCTTTAAAAATTAAACTCCTCCGCCTTTATCTAGCACTTAATTCTCTAAACTCAAACCATTCCTTTTGTATAATTAGCACTTTTT

Associated Phenotype:

Not determined