ZMP

six9

Ensembl ID:

ENSDARG00000068407

ZFIN ID:

ZDB-GENE-990621-11

Description:

sine oculis homeobox homolog 9 [Source:RefSeq peptide;Acc:NP_001124080]

Human Orthologues:

SIX1, SIX2, SIX3, SIX6

Human Descriptions:

SIX homeobox 1 [Source:HGNC Symbol;Acc:10887]
SIX homeobox 2 [Source:HGNC Symbol;Acc:10888]
SIX homeobox 3 [Source:HGNC Symbol;Acc:10889]
SIX homeobox 6 [Source:HGNC Symbol;Acc:10892]

Mouse Orthologues:

Six1, Six2, Six3, Six6

Mouse Descriptions:

sine oculis-related homeobox 1 homolog (Drosophila) Gene [Source:MGI Symbol;Acc:MGI:102780]
sine oculis-related homeobox 2 homolog (Drosophila) Gene [Source:MGI Symbol;Acc:MGI:102778]
sine oculis-related homeobox 3 homolog (Drosophila) Gene [Source:MGI Symbol;Acc:MGI:102764]
sine oculis-related homeobox 6 homolog (Drosophila) Gene [Source:MGI Symbol;Acc:MGI:1341840]

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa36698	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa36698

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

A > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000078064	Nonsense	211	235	3	3
ENSDART00000126421	None	221	221	3	3

Genomic Location (Zv9):

Chromosome 18 (position 35577684)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	18	37256840
GRCz11	18	37237848

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CAGGAGCGTTCTTGAGTTCAGATGAGGAGATCTCTCCTCCAGGAAGCCCC[A/T]GAACACTGTTCTCCTGCTCCCAGCAGCTCTCTGCCCACCCACCTCCTCTC

Long Flanking Sequence:

GTAAAGCATTTAGTCTGGAAAACATCTGTGTATAAAATAGGAGTGGCGTTTTTAAAAGGTCTGTTTTAATTAAAACATCCTAAATACAAATGTCTATTTAACATCTGATAGGAGACGTCCAATAGATGTGTCGCAGATGAGCATCTTCTAGATGTAAACACAAACATCAAATAGAAGTCTTCACGGTGTTCATGTGCTCTTGGTTAAAACCCCCATTTTAAATTACAAAAAAAACTGTTGATGGGGCCTAAATATTGTTACGGACAAGAATCTAAATGGCTGAGAGCTGTTCTTCTGTTCTTTCATTGGTTTCTGGCTGCCCTCTGCTGGATGTGCCAACAAACTGAAAAATTAAATAATTTTACTCAAGAATTAAAACTTTTCTATTGCTACTTGACCTCAGTATGGCATGTTTTAGATTGTATACTGTTTGTTCCAGCAGAACTTCAGCAGGAGCGTTCTTGAGTTCAGATGAGGAGATCTCTCCTCCAGGAAGCCCC[A/T]GAACACTGTTCTCCTGCTCCCAGCAGCTCTCTGCCCACCCACCTCCTCTCCGCCATCTGGGACCTGCACACTATTGAGTGCACTGGAACACAGGTCAAACAACAGCAATCTAATGTGCTGCAAGCATGTTTGTGTTGAGTTTATATGTTGGAATACAGTTGACTAAGAGCAAGAGTTCAGAAAACATGAGATTTGTGGAGTCGCTGTAGTGTAATAATGGAGTGAAATTTGATAATTTGTGCATGCTTCTGAGATTAAAGTATTCAGGCACAACAAATAATAGCAGTTAGAACTTTACTAAAGGTGTATTTTAATGAATTATTTATACAATAAAGACAACACAGTTATTTTAAATTTGAATATTCAATTTCTGAATACTGTTAGACTCCCCAGAAAAGAACTGTTTATTTCATTTCCATCTTTTGCTCTATTCCATTTATCTATGATTTTATGCATGAGTCGCTCCCCTACCAAATAGTCCTAATCAATATAAGGAAAGA

Associated Phenotype:

Not determined