si:dkey-29p10.4

Ensembl ID:

ENSDARG00000017173

ZFIN ID:

ZDB-GENE-050420-117

Description:

Novel protein similar to vertebrate tripartite motif-containing family [Source:UniProtKB/TrEMBL;Acc:

Human Orthologues:

TRIM16, TRIM16L, TRIM25, TRIM29, TRIM47, TRIM8

Human Descriptions:

tripartite motif-containing 16 [Source:HGNC Symbol;Acc:17241]
tripartite motif-containing 16-like [Source:HGNC Symbol;Acc:32670]
tripartite motif-containing 25 [Source:HGNC Symbol;Acc:12932]
tripartite motif-containing 29 [Source:HGNC Symbol;Acc:17274]
tripartite motif-containing 47 [Source:HGNC Symbol;Acc:19020]
tripartite motif-containing 8 [Source:HGNC Symbol;Acc:15579]

Mouse Orthologues:

4933422H20Rik, Trim16, Trim25, Trim29, Trim47, Trim8

Mouse Descriptions:

RIKEN cDNA 4933422H20 gene Gene [Source:MGI Symbol;Acc:MGI:3588186]
tripartite motif-containing 16 Gene [Source:MGI Symbol;Acc:MGI:2137356]
tripartite motif-containing 25 Gene [Source:MGI Symbol;Acc:MGI:102749]
tripartite motif-containing 29 Gene [Source:MGI Symbol;Acc:MGI:1919419]
tripartite motif-containing 47 Gene [Source:MGI Symbol;Acc:MGI:1917374]
tripartite motif-containing 8 Gene [Source:MGI Symbol;Acc:MGI:1933302]

Allele Name	Consequence	Status	Availability
sa36668	Nonsense	Mutation detected in F1 DNA	Not yet available
sa1348	Essential Splice Site	Confirmed mutation in F2 line	Not yet available
sa5911	Essential Splice Site	Mutation detected in F1 DNA	Not yet available
sa5795	Essential Splice Site	F2 line generated	Not yet available
sa9144	Nonsense	Mutation detected in F1 DNA	Not yet available
sa23318	Nonsense	Available for shipment	Available now

Allele Name:

sa36668

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000098324	Nonsense	117	560	3	12
ENSDART00000136172	Nonsense	271	717	2	7

Genomic Location (Zv9):

Chromosome 18 (position 27285838)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	18	27359093
GRCz11	18	27341471

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GACTATCAAGAAACAGCTCTGTTCCCTGCCATTACTGTCCCAGTTCAGAA[C/T]AGAAGGTGGCAGTAAAGACCTGCCTGGTTTGTGGGGCATCCATGTGCTCA

Long Flanking Sequence:

ATGGATTCAGACTAGGAGTCAGCACAGGATCGTTCAACTTCAATGATGTAATCAACATTGCTGACTCCGATGAAGACACATCAGCGATACCAAAGAAAAGAAGAGCCACAGCAGACGAACACCCATCTGAAAGCCAGTCTTCATCAGTGCTCAGGAGATCCACCTCTACCAGTGACACATCCACACAATGCACACCACCCGAAATAAGTGAGACCACCTCTCCTCAAGCAGAGTCATCTCCAGACAGGACGAGTTCCTCTCAGCAAGTTCCTCTGGCATCCCACAATGACATGGACTCACCCAGGGAAAGCAACACACCACCAACTACCTCTTCTAAAGCCAGTGAGACGCCAACATTCAATGCAAATTCCGATTCTCCTGGAAGACAAGAAAGTCACAACACGTTAAATCTCGAAGATGGTCTAGGTGTCTCTGCAGTGTCGCCAGAGAGACTATCAAGAAACAGCTCTGTTCCCTGCCATTACTGTCCCAGTTCAGAA[C/T]AGAAGGTGGCAGTAAAGACCTGCCTGGTTTGTGGGGCATCCATGTGCTCAGAGCATCTGCGGGATCACCTGGAGAAGCCGGTATTCAAGAGCCACCCGCTGGTGAACGCTGTGGAGGATGTGTCTCTCTGGAGGTGCCAGGAGCACCAGGAGATGAACCGGATCTACTGTCGGTCGTGCGCTGTGTGTGTTTGCACTGTGTGTTCGCTGGTTGGGCTGCACAAGGGCCACGAGTGTATCAGCATCCGAGAGGCAGAGCAGCAGCTCAGGGTGAGAGTTTCAGGTTGTTAATGGAACCTTTTCACAAGAATCCTTTAACAGTCATCAGCATCATAAATCCTTAAAAAAAATGTATATTGGATTTAAAGGTCACCTACACGCTAAAAAATATTGTTATACAAAGCAAAAAAATTACGAAACAGCATTAATATATTCAAGTTACGACAACATCTAACAAAATGAAGTTCACACAACAAACTTTATTATGTTAGCCAAATCTCT

Associated Phenotype:

Not determined

Allele Name:

sa1348

Status:

Confirmed mutation in F2 line
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000098324	None	None	560	None	12
ENSDART00000136172	Essential Splice Site	392	717	3	7

Genomic Location (Zv9):

Chromosome 18 (position 27291716)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	18	27364971
GRCz11	18	27347349

KASP Assay ID:

554-1262.1 (used for ordering genotyping assays)

KASP Sequence:

CCATTCAGGAAAAGGTGTCTGAGCTCAGTGAGAAAAAACATTGTGTTCAG[G/A]TAAGCGTACAAAAATTTTGTTGATTTATCTCTGRAACTTTATYTACTTAC

Long Flanking Sequence:

TTAGTGTTTAAGTTCAGTTTAGCTCAGTTCAGTGGGATTTGAAATCATTACTGAGAGTCCAAACACTGAAGAGCAAATCCTAAAACTATATTCTGATTTAGTACTAAAGAAATATCTCTCATTATTATCAATATTGAAAACTGTTGGAAACAGTTTTTTACGTTCTTTGATGAATAATATATTAAGTTCAAAAGAACAGATTATATATGAATCATTAATGGTATTATAAATGTGTTCAATATCACATTTGATCATCCTTATACATCCTTCCTGAATAAAATATACATTTCATAAAAATAAAATTTCCCTGACCTCAAACTTTTGAACTAATAAGACTTTAGTTTTTTTGAACTAAGATTTTTTTAGTTTTTTTACTCATTGGTTTGTCTGTATTCATTTCTCAGGGCTCGCTGAAGGATGAGATGCAGAAACTCCAAACAACAGAAAAGTCCATTCAGGAAAAGGTGTCTGAGCTCAGTGAGAAAAAACATTGTGTTCAG[G/A]TAAGCGTACAAAAATTTTGTTGATTTATCTCTGGAACTTTATCTACTTACCCAGTTGTTTTATAATAAATGTTGTCTTATTCATGTTTTCAGCACAATTAAATCCAGTGTTGAATGTCCAATCCATTTATTAAAGATAAATGTTGTTAACTGATATAAAGTATTATATCAGTAATAGAAGAAAAATTTAAAACACACTATGGAAATGTTTTAATTATAATTTTTTTTTTGGTGACTAAAATAAGTAAAATAAAGTTGAAATGATAATTTATATTTTATAAATTATAAAACATTTATAAAATAAAATGGAAATTAAATGTTCACCAAAAACATTGATATAAAACAGATATGTTTTTATTTTAAATTGTGGCTTTTGATGATTCATAAAATGGAAATCAACAGACAAAGAATCAAAAATATATGCTAAAAACGTATACCATTGACACCAGATGATACATTGATTGATGTCTTTGGAAGCAATGTTATTGCTCTGTGCAAGAA

Associated Phenotype:

Not determined

Allele Name:

sa5911

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > T

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000098324	Essential Splice Site	251	560	6	12
ENSDART00000136172	None	None	717	None	7

Genomic Location (Zv9):

Chromosome 18 (position 27296032)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	18	27369287
GRCz11	18	27351665

KASP Assay ID:

554-3803.1 (used for ordering genotyping assays)

KASP Sequence:

ATTTTTTTTCWAGAGCAAACAGGAAACAAATAAAATGACCWTACCTTTCT[G/T]TAAACAAGATAAAATTAAAATTAGGGAGATAGTGAAGCTTATTTTAACAA

Long Flanking Sequence:

GAGCATCCCTAGCTATTTAATTTACTTTTTCTTTGTAAGAGAACTTGATTGAAAAATAATTTTCAACATGCTTGAACCATCTAAACAATGGAGTTTAGTTCTGTTTGGTTTTTCAACAGTATTTTGTTACAAAGAAAACAGAAGTGATCTTTGGCTATTTATTTATTTTATATATGGCTATTTATATTGTTAATAATTTGCATAGTTAATATTGTTCTTTGATGTTTAGTTTATAAAGATTTTTCAAATGTTATTTAATTAAAAATAGTTTTAAAAATCTTTTTTTTCCCACCCCACACGAAAAAAATAAAATAAAAAATCGTGATACGAATCGAATCGTGGGTCAAAAATCGTGATACGAACCGAATCGTGGGTTTGGTGTATCGTTACAGCCCTAGAACTTAAACATTTATTCAAATTTATCTTTAAATATTCAGAAATTAAATACTAATTTTTTTTCTAGAGCAAACAGGAAACAAATAAAATGACCATACCTTTCT[G/T]TAAACAAGATAAAATTAAAATTAGGGAGATAGTGAAGCTTATTTTAACAACAAAAGAAATAATAATTCTAAAAATACAAAACACTCAGCGAACTAACATGGCTGAAACAAATCTGAAATTGTACTTTGCTGTTGCTTGCTTCTAGATTGACTGTCACTGGCAATACTTTCAGTTGACTTTTTTAGCAAGACACTCATCACTCAATTGGCTAGTAAGACTATCACACACAGATGACAGTCACACAATGGCTCTGGGCAGGGCAAATTAAAAATTACAAATATATTTCATATTGCAGACTCTTGCGATTTAGCTAATCACAACCTTTCAAATTGCGATTGCGATTCGATTTCGATTAATTAGCCCTAATTAGTACTAATACATGCTCGGTGTAGTAAAAATCATAATTATATTTATATCCATGTCTAATCTCAGATGTTAAGACAGCGATTCTTTTATAAATCTTTTTGATATGAATAAACAGTGGTCATAAACATATTTAC

Associated Phenotype:

Not determined

Allele Name:

sa5795

Status:

F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > T

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000098324	Essential Splice Site	261	560	7	12
ENSDART00000136172	None	None	717	None	7

Genomic Location (Zv9):

Chromosome 18 (position 27296088)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	18	27369343
GRCz11	18	27351721

KASP Assay ID:

554-3538.1 (used for ordering genotyping assays)

KASP Sequence:

AAGATAAAATTAAAATTAGGGAGATAGTGAAGCTTATTTTAACAACAAAA[G/T]AAATAATAATTMTAAAAATACAAAAYACTCAGSGAACTAACATGGCTGAA

Long Flanking Sequence:

TAATTTTCAACATGCTTGAACCATCTAAACAATGGAGTTTAGTTCTGTTTGGTTTTTCAACAGTATTTTGTTACAAAGAAAACAGAAGTGATCTTTGGCTATTTATTTATTTTATATATGGCTATTTATATTGTTAATAATTTGCATAGTTAATATTGTTCTTTGATGTTTAGTTTATAAAGATTTTTCAAATGTTATTTAATTAAAAATAGTTTTAAAAATCTTTTTTTTCCCACCCCACACGAAAAAAATAAAATAAAAAATCGTGATACGAATCGAATCGTGGGTCAAAAATCGTGATACGAACCGAATCGTGGGTTTGGTGTATCGTTACAGCCCTAGAACTTAAACATTTATTCAAATTTATCTTTAAATATTCAGAAATTAAATACTAATTTTTTTTCTAGAGCAAACAGGAAACAAATAAAATGACCATACCTTTCTGTAAACAAGATAAAATTAAAATTAGGGAGATAGTGAAGCTTATTTTAACAACAAAA[G/T]AAATAATAATTCTAAAAATACAAAACACTCAGCGAACTAACATGGCTGAAACAAATCTGAAATTGTACTTTGCTGTTGCTTGCTTCTAGATTGACTGTCACTGGCAATACTTTCAGTTGACTTTTTTAGCAAGACACTCATCACTCAATTGGCTAGTAAGACTATCACACACAGATGACAGTCACACAATGGCTCTGGGCAGGGCAAATTAAAAATTACAAATATATTTCATATTGCAGACTCTTGCGATTTAGCTAATCACAACCTTTCAAATTGCGATTGCGATTCGATTTCGATTAATTAGCCCTAATTAGTACTAATACATGCTCGGTGTAGTAAAAATCATAATTATATTTATATCCATGTCTAATCTCAGATGTTAAGACAGCGATTCTTTTATAAATCTTTTTGATATGAATAAACAGTGGTCATAAACATATTTACAGTTATTATTATTATTTTATCATTATTGTAATTTTTTTTTTAACTTCAAATAAGGA

Associated Phenotype:

Not determined

Allele Name:

sa9144

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000098324	Nonsense	512	560	11	12
ENSDART00000136172	Nonsense	664	717	7	7

Genomic Location (Zv9):

Chromosome 18 (position 27303075)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	18	27376330
GRCz11	18	27358708

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

TTCACCTGTTTGTGCGACTGATCTCCAGAAAGTCGGGGTGTTGCTGAATT[T/A]RAATGAAGGCAGATTGTYGTTTTATAGTGTGGCCAGAGATGGTGCTCTTT

Long Flanking Sequence:

TGTCTGGTGAAACAAATCCAATAAGTGAGCCTACAGCAAAGTCTGACTGACAGCCACAAACATTACATCTGACAGCAGATTTATTTATTTATTTTGTTCATCCACAGATGGGATAAGCCCAACTCTAGATCCTGATACAGTCCATCCAAAGCTGCTGCTGTCCAACGAGAATAGGATGGTACAGTACAGCGAGACCCAGCAGGACTACAGCGAACATGAGGCACGATTCAACATCTTCCCTCAGGTTCTGGGCTCTGATGCCATAGAAAGGGGCTGCTGTTATTGGGAAGTGGAGGTTTCTCTTGATGAGGGTCGCTGGAAGGTGGGCGCCTGTGATGGGCGGATTGGCAGAAAGGGGCAAAAAGACGTCTGCCGTATTGGCTTCTACCCTAATTCTTGGTGTTTAATTTATGAGAAGGGGAAGGTGGAAGCTCTACATGATAAAGTGGCTTCACCTGTTTGTGCGACTGATCTCCAGAAAGTCGGGGTGTTGCTGAATT[T/A]AAATGAAGGCAGATTGTCGTTTTATAGTGTGGCCAGAGATGGTGCTCTTTCTTTGCTCTATAGCTTTGAGCACACGTTTAGTGAGCCGCTGTATCCTGCGCTGGCTGTTTCTAAAACTCAAGTTAGTATCTGCGACGTGTTTAGCAAGAGTGTGGCAGAATAGTAGATTTTTTTGGTAGCATTTTATGAAGAGGTTTCAGTTTTTATTGTTAGTGTTCTATAATGGGTTAAAGTCATCATTTACATCATGATGAAAGTTTAGCAACGTGTCATTCAAAACAAAAAGGCTGTGTTCGTTTTGATTATACAAATGAGATTGCGGATGATATATATTGCATTGTGCTTATTTGTAACAACATTTATTCTTAGTGCATTGATCTGTTAGATAAGTGCTAATACTGGAATTAATGATCCGCAGTCATACTAGTCTTCTTGTTTTCACGTTTTATTTGACATTCATCAGGAAACAGACACAATTGTGTTCTTTTTTACTTTACACA

Associated Phenotype:

Not determined

Allele Name:

sa23318

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000098324	Nonsense	530	560	11	12
ENSDART00000136172	Nonsense	682	717	7	7

Genomic Location (Zv9):

Chromosome 18 (position 27303129)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	18	27376384
GRCz11	18	27358762

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TGAAGGCAGATTGTCGTTTTATAGTGTGGCCAGAGATGGTGCTCTTTCTT[T/A]GCTCTATAGCTTTGAGCACACGTTTAGTGAGCCGCTGTATCCTGCGCTGG

Long Flanking Sequence:

CACAAACATTACATCTGACAGCAGATTTATTTATTTATTTTGTTCATCCACAGATGGGATAAGCCCAACTCTAGATCCTGATACAGTCCATCCAAAGCTGCTGCTGTCCAACGAGAATAGGATGGTACAGTACAGCGAGACCCAGCAGGACTACAGCGAACATGAGGCACGATTCAACATCTTCCCTCAGGTTCTGGGCTCTGATGCCATAGAAAGGGGCTGCTGTTATTGGGAAGTGGAGGTTTCTCTTGATGAGGGTCGCTGGAAGGTGGGCGCCTGTGATGGGCGGATTGGCAGAAAGGGGCAAAAAGACGTCTGCCGTATTGGCTTCTACCCTAATTCTTGGTGTTTAATTTATGAGAAGGGGAAGGTGGAAGCTCTACATGATAAAGTGGCTTCACCTGTTTGTGCGACTGATCTCCAGAAAGTCGGGGTGTTGCTGAATTTAAATGAAGGCAGATTGTCGTTTTATAGTGTGGCCAGAGATGGTGCTCTTTCTT[T/A]GCTCTATAGCTTTGAGCACACGTTTAGTGAGCCGCTGTATCCTGCGCTGGCTGTTTCTAAAACTCAAGTTAGTATCTGCGACGTGTTTAGCAAGAGTGTGGCAGAATAGTAGATTTTTTTGGTAGCATTTTATGAAGAGGTTTCAGTTTTTATTGTTAGTGTTCTATAATGGGTTAAAGTCATCATTTACATCATGATGAAAGTTTAGCAACGTGTCATTCAAAACAAAAAGGCTGTGTTCGTTTTGATTATACAAATGAGATTGCGGATGATATATATTGCATTGTGCTTATTTGTAACAACATTTATTCTTAGTGCATTGATCTGTTAGATAAGTGCTAATACTGGAATTAATGATCCGCAGTCATACTAGTCTTCTTGTTTTCACGTTTTATTTGACATTCATCAGGAAACAGACACAATTGTGTTCTTTTTTACTTTACACACTGAGGAAGGCATTGAAATAGTTTGTCTCCTGACAAAGGTCAAATAAAACATCA

Associated Phenotype:

Not determined

ZMP

Alleles

Mutation Details

Mutation Details

Mutation Details

Mutation Details

Mutation Details

Mutation Details