ZMP

rfx4

Ensembl ID:

ENSDARG00000026395

ZFIN ID:

ZDB-GENE-040909-2

Description:

Transcription factor RFX4 [Source:UniProtKB/Swiss-Prot;Acc:A2BGA0]

Human Orthologue:

RFX4

Human Description:

regulatory factor X, 4 (influences HLA class II expression) [Source:HGNC Symbol;Acc:9985]

Mouse Orthologue:

Rfx4

Mouse Description:

regulatory factor X, 4 (influences HLA class II expression) Gene [Source:MGI Symbol;Acc:MGI:1918387]

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa36604	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa36604

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000031752	Nonsense	675	735	18	18

Genomic Location (Zv9):

Chromosome 18 (position 14921075)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	18	15366493
GRCz11	18	15335005

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CGTGTCTAATGAGCGGCTCTCCTCTCCTACACTCCAGTCCAGTGACCCCT[C/T]GATGGCCCGATGTGCCCTCTGCCAACAGCTGTTACTCCAGTCCCACCGTC

Long Flanking Sequence:

CATAAATAATGAAAATAAATTGTGATGTTACTACGGTAACACCTACTGCTACTACTAAGGATGTTGATAATAACTGCTACTTCTACTATTAAGTTATGCATGTGAATGTTTTATTATTTGTTATTTAAGTTGTTATTATAAGTGATTAAACTCACTTTTTTAGTTAATATGATAATAAATAAAATCTATAATATTGCATAATTCCTAAGAAATGCAATATACTAAAATACAGAGAGCCTATTCATTGATTTATAAGGGTACTCTACTTCATACACATTGCTTCATTCACACAAACACGGCTCATAGTGGATGATTTATTTACAAACTGCACAACATGAGCCTCGTCTGATTTATGAATGCTGGTCCTTACTTGTCTCTCTTTGTCTGTGTGTGTGTGTGTGTGTGTGTGTTTGTAGTATCCGCTCAACAGTCAGATGTCCAGAATGGAGTCGTGTCTAATGAGCGGCTCTCCTCTCCTACACTCCAGTCCAGTGACCCCT[C/T]GATGGCCCGATGTGCCCTCTGCCAACAGCTGTTACTCCAGTCCCACCGTCCACGCATCCCGCTACTCCACCGGAGACATGTACTCGCCCCTTGCCCCACGCAGGAACTCTGAATACGAGCACGCACAACACTTTCCAGGATTCGCCTACATTAACGGGGAGGCCACGACCGGATGGGCAAAATGATAAACCAGCGGTGGTCCATATTTAACACATTACAGAGAATGTATCTGAGAATGGCAACGGTGTTTTATTGGTGTGGTCAGTGTTTACAGTGCAAAGCTGCCAATAAAAGTTGATTCGCAATCATTGTGAGAGAAAACGGGACATCCTAAAAAAACGACTGAATGATTTAAGTTATTTATAAAGTCTAAATTTGGTATACTTTTAATAAAATATACATTCTATGCACAGATTAACACAGAACGAACAGAACATGTTAAATTGCCCGTTAAATATTTTTCTCCCATATTAGAAAGAAAATGCTTAATTTGGCTTAAT

Associated Phenotype:

Not determined