ZMP
selo
Ensembl ID:
ZFIN ID:
Description:
selenoprotein O [Source:RefSeq peptide;Acc:NP_001038336]
Human Orthologue:
RP3-402G11.5
Human Description:
Selenoprotein O [Source:UniProtKB/Swiss-Prot;Acc:Q9BVL4]
Mouse Orthologue:
1300018J18Rik
Mouse Description:
RIKEN cDNA 1300018J18 gene Gene [Source:MGI Symbol;Acc:MGI:1919007]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa2956 | Nonsense | F2 line generated | Not yet available |
| sa36598 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa36597 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa2956
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000099701 | Nonsense | 43 | 689 | 1 | 9 |
The following transcripts of ENSDARG00000041951 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 18 (position 14464895)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 18 | 14910313 |
| GRCz11 | 18 | 14878825 |
KASP Assay ID:
554-2707.1 (used for ordering genotyping assays)
KASP Sequence:
ATGCGGGAATGGACGACATGGGCGTAAGCCTGAGCCGCTCTTCCCTTGAA[C/T]GACTCGAGTTTGACAATGTTGCTCTTAAAAAACTYCCTCTGGACCCGTCC
Long Flanking Sequence:
TAGCAACTTTATAGATTTACAGTATAACCAAAATTCCTTTCGGAAAAGTAAAAGCAGTGGTTTTGTTTTAAGGCACTTGCATTAATGAATATAAAATTTGTCTAAAATAAGAATATTTTTCATTACAAACTGAACATTAACATATTTTCCTCATAAACCAAATAAAATATCTATGCAAAGAAACTTTTAAGGTCGCAAGGAATAAAATGATCGAATAGTTCGTTCCTGTGTTTGTGTTTCCAGGGGGAACAATAACAACAACGGACCATATTTCCAAGAACATTTGAGAGCAACTTGCTTCAGTTAAAGTTACGTAATGATGACAGCAGCACTTCTTATCTAACAACCTTAATTTAGACACGAGTACGATGTGAATGGCTTCTGTTGGATCTCGTTTAACCCGGTTTTACATCTCACGCCCCGGTGTTATTGCGCGTAGATTTCTGGCACATGCGGGAATGGACGACATGGGCGTAAGCCTGAGCCGCTCTTCCCTTGAA[C/T]GACTCGAGTTTGACAATGTTGCTCTTAAAAAACTTCCTCTGGACCCGTCCACCGAACCAGGTGTCCGGCAGGTCCGAGGTTCCTGCTTCTCCAGAGTCCAGCCGACCCCTCTGAAGAACCCGGAGTTTGTGGCGGTCTCTGCTCCAGCTCTTGCGCTTCTGGGTCTGGATGCCGAGGAGGTGTTGAAGGATCCGCTGGGCCCGGAGTATCTGAGCGGCTCTAAAGTGATGCCTGGGTCAGAGCCCGCTGCCCACTGCTACTGCGGACACCAGTTTGGACAATTTGCCGGACAGCTCGGAGATGGAGCTGCGTGTTATCTAGGAGAAGTGAAAGCACCGGCGGGTCAGAGCCCGGAGTTACTGCGGGAGAACCCGACTGGACGCTGGGAGATCCAGGTGAAGGGTGCTGGACTGACTCCGTACTCCAGGTAGGTTCATAATCATATCAAACTTTATTACAGACTCAAAGTCCAATTTAAAAAGAAAAAATAAGAAAACAAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa36598
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000099701 | Nonsense | 557 | 689 | 7 | 9 |
The following transcripts of ENSDARG00000041951 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 18 (position 14453136)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 18 | 14898554 |
| GRCz11 | 18 | 14867066 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGAAGGAGCTGATGGACACCACTGAAGAACAGCTGAGGGTCAAGCACACT[G/T]AACACTGGTCCGACTGGATCCAAAAATACAGGTACAGACGTGGCTGTCTT
Long Flanking Sequence:
TAATGAATTGAGGACTATCAGTTTTATGTGAAATGACTATTCAGCATTCACAAGTTTAGTTAATTTTGACTGACATGACATAGGCAAATAATAATGTTCTAAAACAGTAGAGAGTTGTGTGAAAGCAATCGATGCATGTCTAAAAGCATCTGCAATTTGTTGGAAGGAATGAGAAACTGCTACTATGATGTGCACAAATAACTAATTGTTGTGAGAAATGTATTAACTGTTGTGCAAATGTAAATAGTGTTGTGAGAAATGCACCAAAGCCACTGAGAAAATCTTTAAAATAAGTAAATATTTATATAGATATTGCTGAGTGATGTGTTTTTTTTCTTCGATGTAGTGAGCTTGCAATGCTGGTGTCCATGGCTCAGAGTAACCCTGCCCTGTTCCAGATGATTTCGGACAGGGGGACAGTCTCCCGGCAGCTGGAAAGACTCTCCAGACTGAAGGAGCTGATGGACACCACTGAAGAACAGCTGAGGGTCAAGCACACT[G/T]AACACTGGTCCGACTGGATCCAAAAATACAGGTACAGACGTGGCTGTCTTGATCTGATAATCTGTTGGGAGATTTATTATGTATTTGGATTTTTAACAGAGGTGTTTTTCATACAGGTGTATTATTATATACATTTTATTCTAAAAGACTTTCTGGTAGTTTGTATTTTTCTGTCTGTTTGCAGTATTTTTAAAATTATGAAGTAATAAAAAACACTCTAATATGGCCAAAAAACCCTATTTGGAACAAGACTTTAACAAATGTTCAGAATTTTGTGCAAAAAAACGTATGCTAATTAGCACATATTTAATGAGTTGAGGCCTCATTTACATTTTTAAACTTAAGATTTCATAAAACTTAAAAAAAAAAGTTTGGAAATCTTTATCTAATCAATTAACTGAGGAGTTATGGAGATTACAATTAATCCTGTTTTTACTCTGTTCACTTGCAGTTTCTTACTGCAAAAAACATTTATCAGTGTAAATATATTGGCTACTATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa36597
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000099701 | Essential Splice Site | 619 | 689 | 8 | 9 |
The following transcripts of ENSDARG00000041951 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 18 (position 14452452)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 18 | 14897870 |
| GRCz11 | 18 | 14866382 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACATCGCCCAGAATGCAATAGCAGCAGCTGAAAATGGAGACTTCTCAGAG[G/T]TGAGGCTTCATTAGCTTGTTATTCATAGCTTCTAAATTGTAATTTTAGTT
Long Flanking Sequence:
GTATTTTTAAAATTATGAAGTAATAAAAAACACTCTAATATGGCCAAAAAACCCTATTTGGAACAAGACTTTAACAAATGTTCAGAATTTTGTGCAAAAAAACGTATGCTAATTAGCACATATTTAATGAGTTGAGGCCTCATTTACATTTTTAAACTTAAGATTTCATAAAACTTAAAAAAAAAAGTTTGGAAATCTTTATCTAATCAATTAACTGAGGAGTTATGGAGATTACAATTAATCCTGTTTTTACTCTGTTCACTTGCAGTTTCTTACTGCAAAAAACATTTATCAGTGTAAATATATTGGCTACTATTTTTTAATATATCTGTTCAATTTCAAGGCAGCGACTTGCTCGTGAGTGTGAATCTGGGGTCGATGTGAAAGATGTACAGACGGAGAGAGTGCGTGTGATGAACAACAACAACCCGCACGTGGTGCTTAGAAACTACATCGCCCAGAATGCAATAGCAGCAGCTGAAAATGGAGACTTCTCAGAG[G/T]TGAGGCTTCATTAGCTTGTTATTCATAGCTTCTAAATTGTAATTTTAGTTTAACAGGGAGACGGTTATCACTAAATGTTTTACTTTTTCTCAATGTTGATATTATGTTAAAAAAATTTTCTTTATCACCAAAGATCCATATTAAAAAGATTTCTGAAGATGTCACCACAATTACAATTTTTTAATACTTGTGTTAAATCATAATATTTTACTGTTTTTGATTAGGTTACTCTAACTTTTTTTTTATTATTATTCTTTTGAAAATACTTGATCGATCACAATTACTCTGTCAGTAGGTTTTGTTAAGACTGTTAGTGTGGGTGCGTATTCCACACACTATGGGGACCAAATATTTACTCACATCTTGCAATACCAGTACTTTTGTACTTCATGGAGACATCTTTTTGGTCACCATGAGGAAAATGGCTCATAAATCACACTGTATGACTTATTTTAAAAATATAAAAACAAATGTTGTTGTCTATGAGGTTTGGGTTTAAG
Associated Phenotype:
Not determined