ZMP
gnmt
Ensembl ID:
ZFIN ID:
Description:
glycine N-methyltransferase [Source:RefSeq peptide;Acc:NP_997981]
Human Orthologue:
GNMT
Human Description:
glycine N-methyltransferase [Source:HGNC Symbol;Acc:4415]
Mouse Orthologue:
Gnmt
Mouse Description:
glycine N-methyltransferase Gene [Source:MGI Symbol;Acc:MGI:1202304]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa45621 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa36525 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa45621
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000024379 | Essential Splice Site | 150 | 294 | 3 | 6 |
Genomic Location (Zv9):
Chromosome 17 (position 49084672)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 17 | 48892680 |
| GRCz11 | 17 | 48928807 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCTGTAATCTGTCTTGGGAACTCATTTGCTCATTTACCAGATTTTAAAGG[T/A]AAGAACACCAAAGTAAAGGAAAATTAAACTGTACGTTGTATTCACTCCTG
Long Flanking Sequence:
CTTCAAGCTTAAGAGAGTAAGGACACCCCTACCCCTTGATGTGAACGTGCAAAACGAAGTGTAAGGGGAAGGGCTAAAGGGTAGAATTGGGATTGGACCTTGGAGTAAGATGCTGTTAGTGCCATGATGTATTGTTACTGTCATCATCATCACTATTTATTCCTTTTCAAAGGGTGGATTCCATCATGTTGGTAGAAGAGGGATTCAGCGTGGTTAGTGTGGATGCTAGTGATAAAATGCTGAAATATGCTCTTAAAGAGAGATGGGAGAGAAGAAAAGAGACAGCTTTTGATAACTGGGGTAAGAGTGATCTCTGTTTTGTGTGTGGAACTTCACTACTACTAGTGAATGGGTTAAATGTTTATCCATGGTCTGTTCCATTCAGTGATTGAGGAGGCCAACTGGCTAACATTACCAGAAGATGTTAAGAAGCCTGGAGATGGCTTTGATGCTGTAATCTGTCTTGGGAACTCATTTGCTCATTTACCAGATTTTAAAGG[T/A]AAGAACACCAAAGTAAAGGAAAATTAAACTGTACGTTGTATTCACTCCTGTAAAGTTCATTAGTACAATAACTTTGGTCTAGACCAGGGGTGGGCAAACTCGGTCCTGGAGGGCCGGTGTCCTGCACAGATTAGCTCCTACTCTAATCAAGCACACCAGGGCCCGGTTTTTCAAAAGGTTTAATCCGGATAAAATTGATCCGTATTTAGTAATCCTGTTTTTGCAATCCGTGATCACGTAATCCAGCTAACTTTTTGAGCCAGTTTTTCAAAGCAACATTGGATTGGATCATTCTGATCCAGATAGGAACTTTTCAGGATCACTAAATCTGAATTACCAGTGCTCAGTCACAATGTAGATGGATAGATAGGCCTATGTAAAGAGCAACAAGTAGAATAGCCAGTGTGGGGTCAATATAACTTTATTTTTATTTGAAATGAAAACTAAGAAAATTTTATAAATAATAAAATAATTATAATAATAAAAGCAAGAAAAACACC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa36525
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000024379 | Nonsense | 263 | 294 | 6 | 6 |
Genomic Location (Zv9):
Chromosome 17 (position 49078113)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 17 | 48886121 |
| GRCz11 | 17 | 48922248 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACCCCCATCGTGTGGAGAATTTTAAGGAGATATTAAAAGCAGCGTTTTGG[G/T]GAAAATGCGAGCACAATGTATATGCCGACTTCAAGCAATACACTGCAGGA
Long Flanking Sequence:
ATATATATATATATATATATATATATATATATATATATATATATATATATATATACAAATATATTTGTTGTTAATTTATGTTGTTATTAAAGTTGCACTATTACATTTTTTTGTGTACATGTCCGTGGGGATTGCTGTTTTGTTTTACTGTGTACTGTTCTGTAAATGATTTAAATTACAAAACAAGACTACTTGACTTGAGTGTTATGGGTGCACAGCCAGTTTAGGATGGATACATTTGTGGAATTGCAGTGAATATGTTGTCCACCTCGAACTCAGAATCTGGACATTTTAGATGTTAAAAACAAAACACTACTATTTCACTAGAGTTTTTATTCATTTGTTTCTTTTTATTATGAAATAAGTGGTATGTTTATCACAAAATGATTATTAATTACATTCCTAAAAACGTTTTCTTTCTGTCTTCTAGTAAATTCCGCCTGTCATACTACCCCCATCGTGTGGAGAATTTTAAGGAGATATTAAAAGCAGCGTTTTGG[G/T]GAAAATGCGAGCACAATGTATATGCCGACTTCAAGCAATACACTGCAGGAGGAGAGCCACCCTGTTATTTCATCCATGTTGTTAAAAAGACAGCTTAATGCCACTTTAAATCTGCAATTTCATTTCATCTTAACATGGTCTTGTCTGTGTAAAGAAAATCTACTAAGGTAACACATCTACAGGTTTTTTATAAAACTTTGCCATATTGTTTTAAAAGTAAATATTGATTTTGTGATTTCACATTCACAGTTGTTTCCAATTTGAACTGGCCTACATGCTCTTCATTTTATTGATTTATTCATACTTTACTTCAATGATGTTTTATTTAATCTTTCATAGTATACATTCTTATTCTTGATGCTTGTTCTTTATTGAATGCTGTTTTAAAACCTGCACCAAAAAGTAAAGTAAATGTACTACTTTGTGTCTGTACTTCGTGTCTGTATTATATTTACATTTCTACATGAGTTGGCTTAAATGGAGCTTTAAACTTCTTAATG
Associated Phenotype:
Not determined