ZMP
capn3
Ensembl ID:
ZFIN ID:
Description:
calpain-3 [Source:RefSeq peptide;Acc:NP_001004571]
Human Orthologue:
CAPN3
Human Description:
calpain 3, (p94) [Source:HGNC Symbol;Acc:1480]
Mouse Orthologue:
Capn3
Mouse Description:
calpain 3 Gene [Source:MGI Symbol;Acc:MGI:107437]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa36511 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa23173 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa36511
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000103468 | Nonsense | 3 | 725 | 1 | 21 |
Genomic Location (Zv9):
Chromosome 17 (position 45472738)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 17 | 45191920 |
| GRCz11 | 17 | 45305685 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCCGGTGTTTTCAATCCCTTAAAAAAAAAACAGTGAGACAAGATGCCCTA[T/A]ACGCCGTCTGGGTTCTTCTGCGACCGTTTAATTCGGGAGAGGGAGAGAAG
Long Flanking Sequence:
AGTCACATAAAACGGGGAGTTTTGTAAAGTTATGTCAAGCCTGCTGTCTTTATGCTGAGAGTGCTCAATGCCCAACTCTATTGAGACCAGGTTTAAAGGCTGTGAATGCCTTCTGCTGAGGCAGGCCATCTCACTGGCCTCTCTTTGCAGGCCTGCTTTCCTTTGTGTCACCCTACAATGATGGCACGAGCGCCCAAATGTCGCCCAATACTCATTGTTTGCCAGCCAATGGGAGCAGCCCAAAGAGAAGACTGTAGCAGTTTGTGTTTGTATGCAGGTAGCGTTTTTGGAGTGTGTCCACAGGTGCTGTTTTTCTTCTAACCCTGGTTTTTACTCCGTGACCGCACCAAAAGGCACGTCATTTGGCAAGACGACCAATCACAGGTCAGCTGTTTGAATTTATGCCAGGGATTTTTGGGGGCTTGCGAGACTTAAGTTGTGGTGGCAAAAGCCGGTGTTTTCAATCCCTTAAAAAAAAAACAGTGAGACAAGATGCCCTA[T/A]ACGCCGTCTGGGTTCTTCTGCGACCGTTTAATTCGGGAGAGGGAGAGAAGGGATGGCGAAGGGTCGCTGAGCAAACCCATTCGCTTCAGTGGCCAGGACTACACCCTCCTCAAGCAGGAGTATCTCCAGAAGAAGACCCTGTTCGAGGACGAGACCTTCCCTGCTACTGTGGACTCTCTGGGCTATAAAGAACTGGGCCACAAGTCTAACAAAGTCAAGAACATCGTCTGGAAACGTCCCAAGGTAGGAGGCAAGGGAGCTTATGTGGGTTTGGATGGATTTGGACTAGCATTAAGGGGTGGGACGTGGACAAACAATGTAAGAGTTTGGTATTTTAGTGGAGTTCATACAAATTACTCAATAATCTGTCAAAAAATTACTAGATTGAAAAAAAATTCTAGATTGAGATGGATGTTGAAATGGCTCATGGGATGGATGGATCTTTTTTTGTAGATGAACATTGTTCTTGGCCAATGATAATGCTTAGATTTCTAAACTGG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa23173
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000103468 | Essential Splice Site | 445 | 725 | 11 | 21 |
Genomic Location (Zv9):
Chromosome 17 (position 45495584)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 17 | 45344816 |
| GRCz11 | 17 | 45328068 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TAATAATACAACCATATTCCATCCCATTTAATTCTTCCCTTTTTTCCGTA[G/A]GTGCCAAAGGAGGTATGAAAATGTTAAGAAGACTGTTTGGACCCAAGGCT
Long Flanking Sequence:
GGGAATTGAATAAACTAAATTGTCTGTAGTGTATGTGTTTGAATGGGGGAGTGTATGGGTGTTTCCCAGTAGTGGGTTGCAGCTGGAACGGCATCCGCTGTGTAAAACATATGGTCTAATAGTTGGCAATTCATTCCTCTGTGGTGACCTCTGAAATAGAGAAAATGAATGAATAAATGAATGAATGAATGAAGAACCTTAGAAACTGGCAACCAGTGGCATCTATAGTAGGAAAAACAAAAACTATGAAGGTTAGTAAGTACTATTTCCAACATTTTTCGAAATTTCTTCGTTTGTGTTCAACAAAAGAAAGAAACCCGAAGAGGTCTGGAATAAGTTGAGGGAGATTAAATTATGACAGAATTATCATCATTGTCATTATTATTTTAACTGAACTGTCACTTTAAGTGTAATGTGAGAAGCCCTAACGTAATTATTTTCAACCTCATTTAATAATACAACCATATTCCATCCCATTTAATTCTTCCCTTTTTTCCGTA[G/A]GTGCCAAAGGAGGTATGAAAATGTTAAGAAGACTGTTTGGACCCAAGGCTTGTGTATATCACGTTTAAAACATTTGTGCTGCTTTATAGATAGATTATAGCGTCCTAATCATATTCCCTTCTTTGACGCTGTTGTGTCTGTCAGATGCATGGAAATAAGCAGCACATGCAGAAGGAGTTCTTCATGTCTACCACCGCTAAGGCTCGGTCCAGGGCCTACATTAACCTGCGCGAGGTCACCCAGCGTTTCCGTCTGAGTCCCGGAGAGTACGTCATCATTCCCTCTTCTTACGAGCCCCATCAGGAAGGCGAGTTCATCCTCCGCGTCTTCTCTGAAAAGAGAAATACTTCTGAGTGAGTGAGCGCTGAAGGGATGGGAGGGCTTGTGTGTGTGTTTTTTAAGCAAAATAACGTCTGAATACATTTTTACTCACATTAATTTTTTTAATCAGTATGTCATCTTGCATCCTTAGGATACATTTGCTTGAGAAACAAAATGAA
Associated Phenotype:
Not determined