Busch Lab

ZMP

hectd1

Ensembl ID:
ENSDARG00000054213
ZFIN ID:
ZDB-GENE-030616-153
Description:
E3 ubiquitin-protein ligase HECTD1 [Source:RefSeq peptide;Acc:NP_001002504]
Human Orthologue:
HECTD1
Human Description:
HECT domain containing 1 [Source:HGNC Symbol;Acc:20157]
Mouse Orthologue:
Hectd1
Mouse Description:
HECT domain containing 1 Gene [Source:MGI Symbol;Acc:MGI:2384768]

Alleles

There are 11 alleles of this gene:

Allele Name Consequence Status Availability
sa36435 Essential Splice Site Available for shipment Available now
sa36436 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa36437 Nonsense Mutation detected in F1 DNA Not yet available
sa17678 Essential Splice Site Available for shipment Available now
sa18554 Essential Splice Site Available for shipment Available now
sa44875 Nonsense Mutation detected in F1 DNA Not yet available
sa28873 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa28874 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa36438 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa36435
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000076340 Essential Splice Site None 163 None 5
ENSDART00000076344 Essential Splice Site None 2576 None 42

The following transcripts of ENSDARG00000054213 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 17 (position 28729598)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 28653525
GRCz11 17 28670488
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CGAATTCTGTCCACCCTGTGTGTGTTTTCTCGTCGTTCGGCGATAAACGG[T/A]GAGTGTTTGTGTGTGTCGGCAGAGGGTTTGTGTCTCTGCTTCAGAGGCGC
Long Flanking Sequence:
AAATGTCTTAAAATCTCTTAAATATGTCTCTTTTGTTATTATTCATCGATAAAACGGATAATGCATTCAAGTAGTTTTGGGATTTACGTTAACCAAATATAGCTTGCTTCGTATATTAGACAGCGAGCGTCTTTGTTCACTTTGTACAATTTCGCAATATAGGTGAATGAATGTCTGATCTGTTTTTTTGTCGACCTCGATGAAGGCGAGGTGTTTTAGCACCCCCTGTCGCTGAGCCGCATCGCTGCGTGTTTCTGACCGCTGCTGCTGCTGCTGCCGCGGAGCCTCGTGATATGCGGAGCCTCGACTAGTTCTCTCGTCTGCTCTCCATTTCACTCGATATTTCACCCGTCGCCTTCCCGTTCACTTTGACCTCTACCTTACGACCAACAGAAGCGGGGAATGAAGCAATATTCACATCTCTCCGACTGATACAACTTCATTCCGAGACGAATTCTGTCCACCCTGTGTGTGTTTTCTCGTCGTTCGGCGATAAACGG[T/A]GAGTGTTTGTGTGTGTCGGCAGAGGGTTTGTGTCTCTGCTTCAGAGGCGCGTTGAGGCCTCGGGCTTTCACTCAAATTTAGCTCGCGGATTTAGTGGTAAACAGGAGGCCGCTGATGTGTGTCTTTGTTTTATGGGTTTTCAACGTTAAAATGTTTTCAGATCTATTTTATGTATGGATGGAAAACATATTCCTTCGTTATTCAAATAAAGTAAACGAAGTTTGGGATTAATTAGGTCTCCCGAAGTGAAGCTAACAGGACGCATTTTAGCTAACGTAATCCCAGCTAGCCAAGTGTCGCTTTCACAGCCGTTTATTAGTGGTTTTACTCTTTTAGTGGGAAAAACATATAGTCAAATACAATTGTTAACGAGAAATTAAACGTTTGTAGAGTCTGTCATGGCGTTTAAGCTAACATAAGCTGTTTGAGCTCCAGAAAGAGGCCATCAGGACCAGATTGGACGTGAATATATTATTATTTCTTTGCTTAACTTGTTTCTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa36436
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000076340 None None 163 None 5
ENSDART00000076344 Essential Splice Site 386 2576 6 42

The following transcripts of ENSDARG00000054213 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 17 (position 28739849)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 28663776
GRCz11 17 28680739
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATACGCAGCAAAGACACCGATGCTCTCATTGATGCCATTGATACCGGTGG[T/A]AAGTGTTCATATAGTGCATATTAATATGATAAAGTTAATATTTGGTTTTA
Long Flanking Sequence:
GCAACCAAGTGTCCACCATCGTCAGCCTGCTGTCCACACTCTGCAGAGGCTCACCACTTGTCACGCATGTAAGATGTACATTCACAGAACATTCTTGTTATTTGCTAAATGTAACAAGTACTGTGTGCTTTATCTGGTTTGTCATGATAGAACATTTCTGAAATGTATTGAAATTCCAGTATCGGCTGTTTACATTTATGAATAATTGTGTTTGCCATCCTCCTTTAGGATCTTCTGCGCTCAGAGCTGCCCGACTCTATGGAGAGTGCTCTACAGGGGGACGAGCGGTGTGTACTGGACACTATGCGGCTGGTGGACTTACTGCTGGTGTTGCTCTTTGAAGGCCGCAAGGCTTTGCCCAAATCTACAGCTGGGTCTACAGGCCGTATTCCTGGGCTGCGGCGTCTCGACAGCTCCGGGGAACGCTCCCACCGACAGCTTATTGACTGTATACGCAGCAAAGACACCGATGCTCTCATTGATGCCATTGATACCGGTGG[T/A]AAGTGTTCATATAGTGCATATTAATATGATAAAGTTAATATTTGGTTTTAGGAGGGTAGTAATTGAGTGAAGTTGCTTTGTATTTACATCCTGAATGACTTTGTGATTCAGTGTTTGCTGAGCATATTTTCTTTTTCTCTCCAAGCATTTGAAGTGAATTTCATGGATGATGTAGGACAGACTCTCTTAAACTGGGCGTCTGCATTTGGAACGCAAGAAATGGTAAGTTTTCCTTCTTTTTTTTTTTTTTTTGTTCCCACATGTTGCAACACATTGCCTTCAGACACAATGCAACAGCATGAGCAAACAAACAGCAGACTTGTGAATAAAGGTTATGTGCTAAATTTAGGACGGCAATATTCTTATGTTGCACAATACGGTTATGTGAAGAAGACATGGCTGAATTGTCGAGATTGTAATTTTGGCTGACACGCCGGCAGCAGCAGTGCTACAAATGCCATGCATAATGAAAACCAATACAGTCTGATATCTTGACCCTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa36437
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000076340 None None 163 None 5
ENSDART00000076344 Nonsense 554 2576 11 42

The following transcripts of ENSDARG00000054213 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 17 (position 28741493)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 28665420
GRCz11 17 28682383
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTCTTTTACAGGAAAGCTAGTTTAGCTCTGATCAGAAAAATGGTGCACTA[C/A]AGTTCTGAAGTTCTGCTTAAGGAAGTGTGTGATTCTGATGCTGGACACAA
Long Flanking Sequence:
AAGTAGTGTTTGTATATATTTTTTTACGTTTATGGTTATACTAGTAAAATGTACACCAATTGTGCTCGCCAATAATACAAAATGGGGATTTGCCTTTTTTCAAAATTAAGTTTTTTGTCTTGTTTGCTATAGGAGACTGGATGTGCCCTGTAAACAAAGGGGATGACAAGAAAAAGAAGGATGTCAATAAAGAAGAGGAGGAAGGCAGTGAGCCGAAAGGTGACCCTGAAATGGCGCCAATCTACCTGAAAAGGCTACTTCCAGTATTTGCACAGACCTTTCAGCAAACCATGCTGCCTTCAATAAGGTGAAAAGCATCATTATTAAGATACGTAATAATAAACAAACATCAAGCTGGTTGTTTTCTTGTGTATCAAGTGTAGCCCTTTTTATTTTGACGCTAGCAGTCCATGGGACCTTCAGTGTTTTGTTGTTATAGACTCTTTGTATCTCTTTTACAGGAAAGCTAGTTTAGCTCTGATCAGAAAAATGGTGCACTA[C/A]AGTTCTGAAGTTCTGCTTAAGGAAGTGTGTGATTCTGATGCTGGACACAACTTGCCCACTGTACTTGTGGAGATCACTGCGACTGTGCTGGATCAGGAGGTTGGATAATTTGTTGGATAAAATGATATTTTCTGAAAATTATTCAGATTGAAGTTAAAGTGTTACTGACTTGTTTACTATTTCACAGGATGATGATGATGGTCACCTGCTGGCACTTCAGATCATTAGGGATCTAGTGGATAAGGGAGGTGACGTGTTCTTAGATCAGCTGGCCAGGCTGGGTGTCATTAATAAGGTGTCCACTCTGGCAGGACCCACGTCAGATGACGAAAATGAGGAAGAGGCCAAGCCTGAGAAGGTCAGGCTCCACTAATACCAGACTTTATATTGTAGTGCAGTTAATTAATCTGTATAAACAATTTGTATTAAGGACAACTTTTTCTTGAAATTGTTTGAAATTTACCATTTTTGTTTTTTCCAGGATGACGAACCACAAGAGG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17678
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000076340 None None 163 None 5
ENSDART00000076344 Essential Splice Site 958 2576 18 42

The following transcripts of ENSDARG00000054213 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 17 (position 28744148)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 28668075
GRCz11 17 28685038
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GAATAAATGTGTTCAAGACTGCATTCACTGAAAATGAAGATGACGAAAGG[T/C]AAACTGTATATTATGTTCCACTTGAACGGTTTGTGTTTTTGTTGGGCTCT
Long Flanking Sequence:
ATTGCCACTCAGCTGGAGTCTGCTTGGGAGCTACATACTAACAGACAGGTAGAATTATGCTAAATGTGCAAATTTGAAATGCAAATATATGTTCTCTCATTTTACCCCATGTTGTTGAGGTCGAAAAAACAAAAAAATTTTCCCGTGTTTTTTCTTTTTTATCAGTGCATTGAAGGTGAAAACACATGGCGAGACCTCATGAAAACAGCACTAGAGAATTTAATAGTAGTTCTCAAGGATGAGAACACCATTTCTCCTTATGAAATGTGCAGCAGTGGCCTCGTACAAGCGCTTTTTACTGTCCTCAGCAATGTGAGTCACACACACAAATTAGTTTTGTCAGTTGTAAACATGTTGTCAGCTTTTATTCTCATTGCTCATTACCTTCTTACTATTTTTCTCAGAGTGTGGAACTTGACATAAAACATGATTGTAAGCCTCTGATGGAAAGAATAAATGTGTTCAAGACTGCATTCACTGAAAATGAAGATGACGAAAGG[T/C]AAACTGTATATTATGTTCCACTTGAACGGTTTGTGTTTTTGTTGGGCTCTTCTTAGAAGTCTACATCTTAACCAGCAGTTTATTTGTATGGTTAGGATGAAATGAGAGAATTTGTTTGTAGTCTGTTTGTCTTATGTCAATGCCTCTCTCTCTCTCACCTCCAGCCGACCCGCAGTTGCCTTAATCCGCAAACTGATAGCAGTGCTGGAATCAATAGAGCGGCTACCTTTGCACTTATATGATACCCCAGGCTCAACATATAATTTACAGGTCAGTCTCCATCTTTGCAGATGTATTTTTAGTTTAGAACATTTTTAAATGGTGACCTCTTTCATTATGAATAGTATAGTTTCACTGAATGGTTTTCCTGTTGTATTAGATACTGACAAGGAGGTTACGCTTCCGCCTGGAACGTGCTCCAGGTGAAACAGCCCTGATTGATCGAACTGGAAGAATGTTGAAGATGGAGCCGCTGGCCACTGTTGAGTCACTTGAGCAGT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa18554
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000076340 None None 163 None 5
ENSDART00000076344 Essential Splice Site 993 2576 19 42

The following transcripts of ENSDARG00000054213 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 17 (position 28744419)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 28668346
GRCz11 17 28685309
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GGCTACCTTTGCAYTTRTATGATACCCCAGGCTCAACAWATAATTTACAG[G/T]TCAGTCTYCATCTTTGCAGATGTATTTTTAGTTTAGAACWTTTTTAAATG
Long Flanking Sequence:
GCAGTGGCCTCGTACAAGCGCTTTTTACTGTCCTCAGCAATGTGAGTCACACACACAAATTAGTTTTGTCAGTTGTAAACATGTTGTCAGCTTTTATTCTCATTGCTCATTACCTTCTTACTATTTTTCTCAGAGTGTGGAACTTGACATAAAACATGATTGTAAGCCTCTGATGGAAAGAATAAATGTGTTCAAGACTGCATTCACTGAAAATGAAGATGACGAAAGGTAAACTGTATATTATGTTCCACTTGAACGGTTTGTGTTTTTGTTGGGCTCTTCTTAGAAGTCTACATCTTAACCAGCAGTTTATTTGTATGGTTAGGATGAAATGAGAGAATTTGTTTGTAGTCTGTTTGTCTTATGTCAATGCCTCTCTCTCTCTCACCTCCAGCCGACCCGCAGTTGCCTTAATCCGCAAACTGATAGCAGTGCTGGAATCAATAGAGCGGCTACCTTTGCACTTATATGATACCCCAGGCTCAACATATAATTTACAG[G/T]TCAGTCTCCATCTTTGCAGATGTATTTTTAGTTTAGAACATTTTTAAATGGTGACCTCTTTCATTATGAATAGTATAGTTTCACTGAATGGTTTTCCTGTTGTATTAGATACTGACAAGGAGGTTACGCTTCCGCCTGGAACGTGCTCCAGGTGAAACAGCCCTGATTGATCGAACTGGAAGAATGTTGAAGATGGAGCCGCTGGCCACTGTTGAGTCACTTGAGCAGTATCTGCTCAAGATGGTAGGATGTTGTCTCTTTTTTCCTATTATTCTATATTGACTCATTTGTATTCTTACAGGCCTCTTAGAAAAAGTAACTTTTGTCTCATCCTTCCCCAGGTGGCCAAGCAGTGGTATGACTTTGACCGGTCCTCATTCATCTTCGTTAGGAAGCTCAGAGAGGGCCAGAACTTCACCTTCAGGCACCAGCATGACTTTGATGAGAATGGAATTGTGTATTGGATTGGTACCAATGCAAAGTGAGCAGCTTTGTGCTTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa44875
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000076340 None None 163 None 5
ENSDART00000076344 Nonsense 1075 2576 21 42

The following transcripts of ENSDARG00000054213 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 17 (position 28744869)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 28668796
GRCz11 17 28685759
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAGAGGGCCAGAACTTCACCTTCAGGCACCAGCATGACTTTGATGAGAAT[G/T]GAATTGTGTATTGGATTGGTACCAATGCAAAGTGAGCAGCTTTGTGCTTT
Long Flanking Sequence:
GGCTACCTTTGCACTTATATGATACCCCAGGCTCAACATATAATTTACAGGTCAGTCTCCATCTTTGCAGATGTATTTTTAGTTTAGAACATTTTTAAATGGTGACCTCTTTCATTATGAATAGTATAGTTTCACTGAATGGTTTTCCTGTTGTATTAGATACTGACAAGGAGGTTACGCTTCCGCCTGGAACGTGCTCCAGGTGAAACAGCCCTGATTGATCGAACTGGAAGAATGTTGAAGATGGAGCCGCTGGCCACTGTTGAGTCACTTGAGCAGTATCTGCTCAAGATGGTAGGATGTTGTCTCTTTTTTCCTATTATTCTATATTGACTCATTTGTATTCTTACAGGCCTCTTAGAAAAAGTAACTTTTGTCTCATCCTTCCCCAGGTGGCCAAGCAGTGGTATGACTTTGACCGGTCCTCATTCATCTTCGTTAGGAAGCTCAGAGAGGGCCAGAACTTCACCTTCAGGCACCAGCATGACTTTGATGAGAAT[G/T]GAATTGTGTATTGGATTGGTACCAATGCAAAGTGAGCAGCTTTGTGCTTTTTTCCTGGTCATTTTTATTGAAATTGAATTTGTATTTATTTCATACACTAAACCCCAAGGTGACCTACTTGACTTGATTGTAGATGTTAATTCTTTTCTGCTTTCCTTCAGGACTGCGTATGAATGGGTGAACCCTGCTGCTTATGGATTAGTGGTTGTGACCTCCTCCGAGGGCAGAAACTTGCCTTATGGCCGACTTGAAGACATCTTGAGCAGAGACAGCTCCGCCCTCAACTGTCACACCAACGATGATAAAAACGCCTGGTTTGCCATTGACCTCGGTTTATGGTTTGTCCCCTCTGCATACACACTTCGTCACGCTCGTGGATACGGTCGGTCCGCTCTCAGAAATTGGGTGTTTCAAGTGTCCAAAGATGGTCAGAACTGGATGACTCTCTACACCCACGTAGATGACAGCTCTCTCAATGAACCAGGGTATGGGTGTTAAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa28873
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000076340 None None 163 None 5
ENSDART00000076344 Essential Splice Site 1856 2576 None 42

The following transcripts of ENSDARG00000054213 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 17 (position 28751888)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 28675815
GRCz11 17 28692778
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTATAGAGAATTGAAGGATTCCGACAAAGAAAGAGAGAGCGGAAAGATGG[T/G]AATAGCACATTTTTTAACATCTCTTCTCCTCTCAATCTCTCTTCCTATCC
Long Flanking Sequence:
TTTTTTTTTTTTTTTAATGGAATATTTTATTAGCATGGCTCCTGTTAGGGCTAACTAACAAATTTGTTTACTGCTGAGTCAATCTCTGCTTTTTGTTTTGAATTTACAATGCGAAAAACATACATCTATTGTGCTTGCAGGAACACCTCGTTCAGAGGTACAGGAGGAGGTGGAGTGCGCTCCTTCACCTCGTCTGGCTCTCATCTTAAAAGTAGCAGGTCTAGGAACTACTCGAGAAGTAGAACTACCTCTCACCAATTACAAGTCCACCATTTTCTATTATGTCCAAAAACTTCTCCAGCTGTCATGCAACGGTGCTATTAAACCTGACAAGCTCAGACGCATCTGGGAGCCTACGTATACGTGAGTCCATTGTTTAACAGTTGTTTTTATATCAACACAGTCATGTTTAGACACCTGCTAACAAACATTGTTATTTTTCAGGATAATGTATAGAGAATTGAAGGATTCCGACAAAGAAAGAGAGAGCGGAAAGATGG[T/G]AATAGCACATTTTTTAACATCTCTTCTCCTCTCAATCTCTCTTCCTATCCTCCTTTCATTCGCTCTCTTCAGCTCATTGAAATCTTGGCTGTGATTTTTCTGTGGCTGTCCCCAATGGTAAATGCTCCCTCTCAGTAAACTGTCTGTCAGTGGTCACTAACCTTAAAGCCAGCAGACTGTGAGATGACCCCCAGTGGTATCTATTGTTAAATGCACGGGCCTCTCTAGTGGTTAAATCTACTGTAATGCATGTGTATTGCGTGAGACTTTACAATCAGGAAAGACCAACATTTGGTTCTTCCTGTTGTAGGGTTGCTGGTCTGTAGAGCATGTGGAACAGTACCTTGGCACAGATGAATTACCAAAGAATGACTTGATAACCTACATGCAGAAGAATGCAGACTCAACTTTCCTGCGCCACTGGAAATTAACCGGCTCTAATAAAAGTATTAGGAAAAACAGAAATTGTTCGCAGCTCATAGCTGCATACAAGGTATAGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa28874
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000076340 None None 163 None 5
ENSDART00000076344 Essential Splice Site 2016 2576 33 42

The following transcripts of ENSDARG00000054213 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 17 (position 28753154)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 28677081
GRCz11 17 28694044
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGAATTCACCAGCAAAAAAATTACAACCAAAATCCTGCAGCAGATTGAAG[T/A]AATTTGACATGTTTTAATTATGCATTGGTTATTTGTTGTAGATTCAATAC
Long Flanking Sequence:
CATAAACTGTATAATTTAGTTAGATTTGCGTTGCTATAGGTCTGCTGAGATAAGGATTGGCAGTCAAAATTAGGGGTGCATTATTAAATGTGCTTGTATGGTTTTCAGGACTTCTGTGAGCGTGGCTGCAGATCTTCAGGCCTGAGTTCAGGGACGTTGTCCACGACGCAAAGCTGTGATATCTTGAGTGCTGCAAGAGAGCAGGCTCAGGCTAAAGCGGGCTCGGGTCAGAGCGCCTGCAGCGTAGAGGATGTACTGCAGCTCTTGCGCATCCTTTTCACCATCGGAGGAGAACCTACATCTGGACGCACACTACAGGAAGGTAAGCAGCTCGTCCTCCCAGCATCGTGTCAATCCTTTTTGTTTCTTTGTTTTTAAATTTAGTATTTGCCTATAATTCACATTTATTTGTGCAGATGTGGAAGAGCTACAGTTCAATGCATCACCTGAGGAATTCACCAGCAAAAAAATTACAACCAAAATCCTGCAGCAGATTGAAG[T/A]AATTTGACATGTTTTAATTATGCATTGGTTATTTGTTGTAGATTCAATACTATTCAAAAGTTAAGAGTCGGTAAGGTGTTATTTTATTTTTTATATTGTTTAACACTTTGGTCCATTTTAAAATGACATGGATGTCATTTAGAGCACAAGACACAAGACAGTAAAAAATATGACCAAATAATTTAAAACAAATTTGATTGCACTGCTCTCTGGAATACCTAAATCTATTTGGTCAGTCATGATTCACTACATTCCAAGGTATGTTATTTTCAGATTACAACAGCTGAAAAAAAAGACTCCTCTGAGTACATTAAGACTACCCTGACTACTAAACTACTTTAAAAAAATTAAAAAAAAAAAAAAAATCAGCCCTAATTTTCAGGATTTTATTTTTAAGTGTCAAGCTGATTTTACACTTAAATTAACATTATTCAAGAAGTTCAGTAAGTTACCATTATTTATGTATTTATTCTAAAATGCATTTTTGTATGGTTAAAAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa36438
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000076340 None None 163 None 5
ENSDART00000076344 Nonsense 2254 2576 37 42

The following transcripts of ENSDARG00000054213 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 17 (position 28755213)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 28679140
GRCz11 17 28696103
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAACTGCTCTGTATGGGTGACATCAAAAGCAACATGAGTAAGCTACTTTA[T/A]CAAACCCGTGGTGAGTCGGACTGTCACTTCTCTGAAATCCAGTCTGAGGC
Long Flanking Sequence:
TTACTACTTTATAACGAATGGTAATCTCGCCCAGGTGGAGTTCCAAGGGGAGGAGGGCACTGGTCTCGGACCCACCCTGGAGTTCTATGCTCTTGTTGCGGCAGAGTTTCAGAGGACCTCCCTTGGCATCTGGCTCTGTGATGATGACTTCCCAGATGATGAGTCACGTCAGGTAAGCACTTCACAACATCGTCACCTTGAGGCACTAGCCCATTTAAATCTGCCATTTCACTAACTTTTTTTGTTGTTCATCAGGTGGATCTGGGCGGTGGCTTGAAACCGCCAGGCTATTACGTGCAGCGTTCCTGCGGCCTTTTCCCTGCTCCCTTCCCTCAGGACAGCGATGAACTGGAGCGTATTACCAAACTTTTCTTGTTCCTTGGCATCTTTCTGGCCAAATGCATCCAGGACAACCGGCTCGTGGATCTGCCCATATCCCAGCCTTTCTTTAAACTGCTCTGTATGGGTGACATCAAAAGCAACATGAGTAAGCTACTTTA[T/A]CAAACCCGTGGTGAGTCGGACTGTCACTTCTCTGAAATCCAGTCTGAGGCCTCCACCGAGGAGGGTCAGGACACGTACTCTGTGGGTAGTTTTGATGAAGACTCCAAGTCTGAGTTTATTCTTGACCCACCGAAGCCCAAACCACCAGCCTGGTATCATGGCATCTTGACCTGGGAGGACTTTGAACTGGTAAACCCTCACAGAGCACTGTTTCTTAAAGAGCTGAAGGCACTTTCTGTGAAGCGCAGGCAGATTCTAGGCAATAAGAGTCTGTCCGAGGATGAGAAGAACACACGGCTTCAGGATCTCATGCTGAAGAATCCTATGGGCTCTGGCCCTCCACTGTGTGTTGAAGATCTAGGGTGAGATATGAACGTCACTTTGTATTACAATCTAGGAAATGATGTTTTTGTTTGTGTAAGGATGATGCTTATCTACATGTGTTGTTCTGTTTTAATTGTTTTACTAGATTAAATTTCCAGTTCTGTCCATCATCCAAA
Associated Phenotype:
Not determined