ZMP
kdm1a
Ensembl ID:
ZFIN ID:
Description:
Aof2 protein [Source:UniProtKB/TrEMBL;Acc:A0JMQ3]
Human Orthologue:
KDM1A
Human Description:
lysine (K)-specific demethylase 1A [Source:HGNC Symbol;Acc:29079]
Mouse Orthologue:
Kdm1a
Mouse Description:
lysine (K)-specific demethylase 1A Gene [Source:MGI Symbol;Acc:MGI:1196256]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa36433 | Nonsense | Available for shipment | Available now |
| sa23095 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa36433
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000085758 | Nonsense | 627 | 848 | 17 | 21 |
Genomic Location (Zv9):
Chromosome 17 (position 28149976)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 17 | 28073903 |
| GRCz11 | 17 | 28090866 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTATAAATGTGACGCCGTGTTGTGTACCCTACCTTTGGGAGTGATGAAA[C/T]AGCAGCCGCCGGCCGTGCAGTTTGTCCCTCCTCTGCCAGAATGGAAGACG
Long Flanking Sequence:
TCTAAAGTACCTGTACTGGGACAAAAAATAAATATATATTTACAGACCTTCACATAAGTAAATAAACAGATTGAGTTATGGGCTCAAAAATCTGCAGAAATATGTGAAGATGAGCATAGTCATAGGTTTGATTTACAGTGTAAACTCAAATTACAGAAAAAAGTGTTTGCTCCATCTGTGTTTGAACAGGATGATGATTTTGAGTTTACGGGCAGTCATCTGACTGTGCGGAACGGGTACTCGTGTGTCCCGGTGGCCCTTGCCGAGGGTTTGGATATCAAACTCAACACTGCAGTAAGACAGGTCCGATACACATCATCTGGTGAGTCAGTCATTCACTCAAGTTCCTGTTTTGTCTGTGTTGTGTTTGTGTTCATGACCATCATGTCCTTCCTGTCTCAGGTTGCGAGGTGATTGCGGTGAATACTCGCTCCACTACCCAGACATTCATTTATAAATGTGACGCCGTGTTGTGTACCCTACCTTTGGGAGTGATGAAA[C/T]AGCAGCCGCCGGCCGTGCAGTTTGTCCCTCCTCTGCCAGAATGGAAGACGGCTGCCATCCAGAGAATGGGCTTTGGAAATCTCAACAAGGTGTGAATAACTGTTTATTCCATTGCAGACGAGAGAGTGTTGATGTAATGACAATGCTGGTCTGCGTCAGCTTGGGACATTTTATGAGAATATCAATCCAGAGTGAACATTTGCTTGGGCTGGTTAGGTCAAATCAAATCTAAAGGGATGGATATTGGTATCTTTCTATATATAGTCCTTAACAAATTTACCCCTACGTATATTGAGAGTTCAGGATGCGTCATCATCATTTTCCTCCTCTGCACTCTCTCGCTCTCCTCGCTCCCTCTCCTGGTTCAGCTGCAGCAGAAAATTGCTGCAGTATTATGCAATTGTCCTGCTCCATTTCTCTGGTTTTGTCACAAGAGGGCACAGTGTGGTACTAGATTCATTCACAGGGCTGCTTTATCAGAACCAGCTGTCTGCACACAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa23095
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000085758 | Essential Splice Site | 737 | 848 | 19 | 21 |
Genomic Location (Zv9):
Chromosome 17 (position 28146512)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 17 | 28070439 |
| GRCz11 | 17 | 28087402 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTTGTCTGGCCATCCTCAAGGGCATTTTTGGAAGCAGCGCAGTCCCTCAG[G/A]TGAGCTCGGAGGCGCTTGCTTCATTTTTAGCTCTGTGCTTTTACAAATAT
Long Flanking Sequence:
TAGTAACCTCATCTGAATCGCAACATTTCCAATATATGGCATTGATTTTCAATGGAAAGTGAACAAAATGTCATTTAAGCTTCGTATGTACAACAATTTAAGTCAGAATTGGTATTTTAGGTCTATGCTCAGAAGCCTGGGCTGATTATACAAATTATAAAGTATAATTAAATTATAGTGTTTAAAGTGTTACACAATTACAATAAAGAAAATCTGAATGTAATAACGGGCAGGTATGAGCTTGCACCTTAACCATAACCAGTAAATGTCATAAAAATGCAAGTTGAAAAAAAGCTATGTGATATGTGAATTATTGTTGCATAATTATGCCACTTAGAACTCGCTTTGAATCTGACCTTTGCATCTTCACAGCCCCCATACTGTTAGCTCTGATGGCAGGAGAGGCTGCAGGCATTATGGAGAATATCAGCGATGATGTCATCGTTGGTCGTTGTCTGGCCATCCTCAAGGGCATTTTTGGAAGCAGCGCAGTCCCTCAG[G/A]TGAGCTCGGAGGCGCTTGCTTCATTTTTAGCTCTGTGCTTTTACAAATATTTTTGTGAACAGCTAGGGATACATGATATTGGATAAATATGATATTCCAAAGTTTTATTGTTTTAGCAATGTATATGGCGATATGAATACAGTTTAACAAGATGGTTTGAATAGAAAAATTGTATAATCACAATGCAAAAAAAAATGTCTTTGTCTTTTTTCTAGTTCAAATATCTAAAAAAAAAGTTTTTGTAAGTAATAAGTTAAAATGAAGAGCTTTTCTTAAAACAAGCTAAATTATCAACAATCTTATTTTCACTTTAAAATGTAGATATTTGGACTAGAAAAAGACAAAATTATAAGTTAGAAAAACTTTTTGTTTTGCATAAATCCTATAAATAAACATAATACATGTTTTTTACACCTGCAAACATCTTATTTTTTGTCCAAATGTGTTAAACTCTTGAAATGTTCAGTCACCGGCCTTAAACACATGCAAATAATACATTT
Associated Phenotype:
Not determined