Busch Lab

ZMP

spdya

Ensembl ID:
ENSDARG00000059131
ZFIN ID:
ZDB-GENE-041010-194
Description:
speedy protein A [Source:RefSeq peptide;Acc:NP_001006091]
Human Orthologue:
SPDYA
Human Description:
speedy homolog A (Xenopus laevis) [Source:HGNC Symbol;Acc:30613]
Mouse Orthologue:
Spdya
Mouse Description:
speedy homolog A (Xenopus laevis) Gene [Source:MGI Symbol;Acc:MGI:1918141]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa36413 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa23081 Essential Splice Site Available for shipment Available now
sa42937 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa36413
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000082251 None None 289 None 7
ENSDART00000130871 Essential Splice Site None 289 None 7
ENSDART00000135986 None None 271 None 5
ENSDART00000147871 Essential Splice Site None 228 None 6

The following transcripts of ENSDARG00000059131 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 17 (position 24637626)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 24791068
GRCz11 17 24809469
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGAGCGCGTCGCACCATGTCATTCCTGAGCGGCGGGTTTTTAAACTGAGG[T/C]AAATGGGTTTACCGGTAAAAAAAACTCGATTAAATGGGCATATAAATTAT
Long Flanking Sequence:
TGTGTGCTTAATGCCTTGACAATTTTGTTTTTAATATAAAGTGTGCATTGTTACTTCTGTAGTGTAACTTTTGTGAAATCTTAAGTCAAAGATTCAATAAATTGTTGGTTTAGAACCTTTCCTGCTTCTCATGTCTGATAATACTTGAGTCTCATTTGGTCGTCCTGTTTTTAGTCAGCTAAATTATTAAACTATTTTTATCTACATGTACTATTAATGTTTATATTGATGTAAGTGTTCTGACCAGTGATTGAGGAATATTTGAACACGTGACTGCTGACATGATACTCACGCGCTACCTGCCCAAGGGTGAGCGGGACATCCAATTTGAAATACCTAAAATTATGATTTTGTTGTAATTAACGTTTAGAAATATTATCATCATTATTATACACATCGGCTAAAATTACATCCCACCTACTCCAGTGGTTAATTTAAACGCACCCGCCGTGAGCGCGTCGCACCATGTCATTCCTGAGCGGCGGGTTTTTAAACTGAGG[T/C]AAATGGGTTTACCGGTAAAAAAAACTCGATTAAATGGGCATATAAATTATCATACCTCGTACAATTAAGCATATAAACATTCGTGGTTACATTTTAGTCAGGGTGGAGCGTCGGGAGACAAGTTTTTATCTTGATATAAGTTGTTTAGTCAAAGAAACTATGCTAAATGTATCGAGGAGATTATAAACATGCGGGAATACGCATAACGTTTGCATTGCGATGTTTAATAGTTATAATACATGTACACGCAGGGGCAATTCTGAAACTCCGGCTGATTTGATCATTGAGACATGATTAAATTGAGTCTACCGTGGCTCGAAACAGCCCCGTCTGGAGCCGCTCACAGTCTGCAGATCCGGCGAGGTCCACGGAAAACAAGGCCGGGCTCGGCGGGTCGGAACTCGGCAGACTCATCGCAGCAGCCGCGCACAAAGACACCCGGGCCGACTCTGCTAATCCAGAGACAAGAGATGGCCGCCTTCTTCAGACTGTTCGGTGGG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa23081
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000082251 Essential Splice Site 69 289 None 7
ENSDART00000130871 Essential Splice Site 69 289 None 7
ENSDART00000135986 Essential Splice Site 69 271 None 5
ENSDART00000147871 Essential Splice Site 69 228 None 6

The following transcripts of ENSDARG00000059131 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 17 (position 24638123)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 24791565
GRCz11 17 24809966
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACTCTGCTAATCCAGAGACAAGAGATGGCCGCCTTCTTCAGACTGTTCGG[T/C]GGGTTCAGCAAAGCAGCTGCCAGTGATACTCATTAAACTAAATGTCACTT
Long Flanking Sequence:
AGGTAAATGGGTTTACCGGTAAAAAAAACTCGATTAAATGGGCATATAAATTATCATACCTCGTACAATTAAGCATATAAACATTCGTGGTTACATTTTAGTCAGGGTGGAGCGTCGGGAGACAAGTTTTTATCTTGATATAAGTTGTTTAGTCAAAGAAACTATGCTAAATGTATCGAGGAGATTATAAACATGCGGGAATACGCATAACGTTTGCATTGCGATGTTTAATAGTTATAATACATGTACACGCAGGGGCAATTCTGAAACTCCGGCTGATTTGATCATTGAGACATGATTAAATTGAGTCTACCGTGGCTCGAAACAGCCCCGTCTGGAGCCGCTCACAGTCTGCAGATCCGGCGAGGTCCACGGAAAACAAGGCCGGGCTCGGCGGGTCGGAACTCGGCAGACTCATCGCAGCAGCCGCGCACAAAGACACCCGGGCCGACTCTGCTAATCCAGAGACAAGAGATGGCCGCCTTCTTCAGACTGTTCGG[T/C]GGGTTCAGCAAAGCAGCTGCCAGTGATACTCATTAAACTAAATGTCACTTGATGTGCCCTAGGATAGTAAACAGTTTTATACCTAGGTCAATTGAAAATTGCCAATGTAAAAATGCAATTCTGTAGAACTAAACTGTGTTCTCAGATGATGATCTAATACAGGACTTTCTGTGGATGGACTGCTGCTGCAAACTTACTGACAAGGTATGGTATGGGACGTTCTACCAGAAACATACATTATCTGTCCCTGAAATAAAAACATAAATACAGTTAATTAAAATGTATTTCATCAAAAAAAAAATATCTGAAATGGACTGATGGTTGATTTTTGAATTGTTAAAGGACTTTTGGTTCTCAGATTTTTTTTTTCTTTATTAAAAACACTTTACGCTGTACAAACCCTGTCAATGTCCGTGTCCTCAGCCTAACTGAACCTACAGCTTTAATAGTTTTGTTAAGCTAAAAACTGTTATTTAAAAAAACTTCAGAAATAGCAAGTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa42937
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000082251 Essential Splice Site 270 289 None 7
ENSDART00000130871 Essential Splice Site 270 289 None 7
ENSDART00000135986 None 270 271 5 5
ENSDART00000147871 None None 228 None 6

The following transcripts of ENSDARG00000059131 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 17 (position 24641025)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 24794467
GRCz11 17 24812868
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGCAAGACGACCAAAGCCCAGCACACCTGCAAATACAAGCCTATTGCAGG[T/C]GAATAAGTGCATGGCGCCCTCTAGTCGTGGTACAGCAGCACTGCTGGTCC
Long Flanking Sequence:
AGATCTTCCCCTGGGCTTTGGGAAAGAGCTGGAGGAAACATTTCCCACGATTCCTGAAGCAAAGAGACCAACTGTGGGCACGTATTGAGTACAGAGCTGCTGTCAGCAGACGATGCTGTGAGGAGGTATGAGGCTCTTTAACCTGCATAGTAAAATATTTTAAAAGATTCAAAAATAGCTCTCCATCATTGTGTGCTTTATGCATGGTTGCAGGTGATGGCTATTGTGCCGTCTCACTTCGTCTGGCAGCGGGAGCGTGCAGAGCATCACAGTGGAGCCCAGAGACTCCAGCAAAACCGCGAAGAGATCCTTGTTCCTCGTGGACCCGCTGCTTCTCCAGAACCTTGCTTTCTGTGTGCCAAAACTTCTGCCCTTCCTGTGCCTCGGCCATCCTCTGCTGGACCCCGCTCTTCATCGGCACCCCTGGAGAGAAAAGCTTCACACAGAGCCAGCAAGACGACCAAAGCCCAGCACACCTGCAAATACAAGCCTATTGCAGG[T/C]GAATAAGTGCATGGCGCCCTCTAGTCGTGGTACAGCAGCACTGCTGGTCCTGTTTACATCTATTGAAATTAGGGCTGAAAAATATTGGGGAATAAAATACACTGCCATATTTTGTTTTCCTGATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTCACTAGATGATTTAATTTGCTCCTTTTGAAAATAATTTATAATTTTACATTGATTGAGAGGATTTTGTAAGGTATATAATGAAATATATATATATATATATATATATATATATATATATATATATATATATATAATTTTTTTTTTTTTTTTTTTTTTTTTTTTACAGTCATATATAAATGCAATTGAAAAAAGATACAAATGCAATAACCAGTTCTTTGTGGTCTTCTAAAGAGTCTGACAGTATTGAGGTATGAAAAATCAATTCTCAAATGTCAAATAGCACT
Associated Phenotype:
Not determined