ZMP

smyd3

Ensembl ID:

ENSDARG00000058050

ZFIN ID:

ZDB-GENE-051120-138

Description:

SET and MYND domain-containing protein 3 [Source:RefSeq peptide;Acc:NP_001032477]

Human Orthologue:

SMYD3

Human Description:

SET and MYND domain containing 3 [Source:HGNC Symbol;Acc:15513]

Mouse Orthologue:

Smyd3

Mouse Description:

SET and MYND domain containing 3 Gene [Source:MGI Symbol;Acc:MGI:1916976]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa36344	Nonsense	Mutation detected in F1 DNA	Not yet available
sa42879	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa36344

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000080847	Nonsense	212	380	7	11
ENSDART00000105236	Nonsense	213	429	7	12
ENSDART00000122178	None	None	151	None	7

Genomic Location (Zv9):

Chromosome 17 (position 11652810)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	17	11635332
GRCz11	17	11789398

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TTTGTCTGCGCCAGCATGTCTCTGCTGAACCACGACTGCCAGCCCAACTG[T/A]ATCATGATGTTTGAGGGCAAGAGACTCACGCTGAGAGCTGTTCGGGTCAT

Long Flanking Sequence:

CACAGTTATGTAAAAACAGATCTGGATCTGGAATCTTCTCTATTACTATAGCTGATTATCCTTGTGAATTGAATGATAACAGCCTTCTGAGCCTACCAGTAGGCAGAAGGCCCCTACTGGCCCATATCTATCAGCTGATGACCACTTATAACTCCGAGTGATAACATTCAAATCTGGTAAATTTGCTCATTATTTACTCACCCCTAAGTGAACTTGTTTTAGTTTCTTTTGTAATCATTGACTTCCATAGTAGGATAAACAAATCATGTGGCAGTCAGTGGTTTTCAGCTTTCTTCAAAATATTTTCTTTTGTGTTTAACGGAAGAAGGAAAGTAAAACAGATTTGGAACAAGTGAAGGGTGAGTAAATGGTGACAGAATTTTCAGTTTTGGGTGAACTATCCCTTTAATCTGTGTCTCGGCGGTTTTCTAGATTAACTGATGTTTTGTGTTTGTCTGCGCCAGCATGTCTCTGCTGAACCACGACTGCCAGCCCAACTG[T/A]ATCATGATGTTTGAGGGCAAGAGACTCACGCTGAGAGCTGTTCGGGTCATCAGATCTGCTGAAGAGGTATACGTCCATACATACATACACTCAAAATATTATTTTAGCTGCTTGTTTAAACTACTTATTTAAAAATGTGCTCAGACAAAACCATTCCTGAGGTTTTTATTCTTTTGACAATTTAGTTGTTTTATGTTCAAATTACTTAAATTTGTAAAAACAATTAAGGTAATTTAATCAATCTGTGTTGGAACCACATGAAGGAATCGTGTGGAACCCAGCATTTTTTACAGTGTACATTCAAAAAATTACTTTGCTGCTTGTTCAAACTACTCATTTAAAATGAGTTGAAACAACACAAGTATTTTCAGTTTTTTGTGGGGGCACAACTTAATTGTTTTATGTTCAATCCACTTAAATTTGTAAAAACATTAAAAGTTAACTTAATCAATTTGTGTTGGAACAACATTATTACATGTTAACAAATAGTACTTCTGTGG

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa42879

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000080847	Nonsense	258	380	9	11
ENSDART00000105236	Nonsense	307	429	10	12
ENSDART00000122178	None	None	151	None	7

Genomic Location (Zv9):

Chromosome 17 (position 11629350)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	17	11611872
GRCz11	17	11765938

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CATTTTAGTCATGTCCTTAACTTTTTAATCAAAAGACTGGGATGAGCTGT[T/A]GAAGGAGAGCCAGGCCCTTCTGCACAGACATTCAGATGTCGTACCAGACA

Long Flanking Sequence:

GAGTTGTCAACTGGAGACTTGTTTAGAACAGATAATTTTAATCAGTTAGCTGTAAACTGGACTCTTGCTCTGAATGGATCATTTAATGCAGTGAGTTGCTGAATGGAAGCCTGATCTGGATTGATCCATTGAATCAGTGAGTTGACTTAAGAGCACATGCAATCAGATTTGTCAGTTCTCTAATGAATTGTTTAGTTTGATTTGCAAGCTGAACTCATCAAAATTCAGCTCACGTCTCCACTACATGGCTGAAATAAACTTTCATGTAACAGTTACAAACAGTTACAGAGATTCTCTCATAAAGATAATTTTTTTATTTTTTTTTTTAAAGATGAACACATTTCTGATTTTCTGTTTGGAATAACATATCTTTTTCATTATGGGGTGAACTAACCATGTAAACCAGCAAAGCTTCGTTGGCTGTTGTATTGTTATAATGAATTTCATCTTCATTTTAGTCATGTCCTTAACTTTTTAATCAAAAGACTGGGATGAGCTGT[T/A]GAAGGAGAGCCAGGCCCTTCTGCACAGACATTCAGATGTCGTACCAGACAGGAACATCTACATGCTCCGACTGCTGGATTTGGCCATGGATGCCTGCATTAGTCTGGATGACTATGAAACTGCTCTGGAATACGGCAACAGGGCTCTGGGTCCTTACAAGTGAGTGTGTGCATCTAAAACTTCTGTTCTGGCAGATTTTCTGCTAAATCTTAGTGGGATACACCTCCATCTCTCATTCAAATCTATAAAAGTCCCTTTATAACTGTGACTCACATAGACTCACTCACTTCTGAAGACCAAAAAGAAACAAGTGCAGCTCTAGTTCGCAGGAACTATTGCTATAAATGTATTGAAAAATTATCCTCTATTATAACATCTGTATATCTTAAAATGTATCTTATGTGTTGCATGTACAAATATCCCAAAAAGTGACATTACATAAATGAATTTAACAGCTTTTATTTCAATCAAACTAAAAGAAATAAGGAACAAAAATAAGG

Associated Phenotype:

Not determined