ZMP
si:dkey-246f6.1
Ensembl ID:
ZFIN ID:
Human Orthologue:
SYNGAP1
Human Description:
synaptic Ras GTPase activating protein 1 [Source:HGNC Symbol;Acc:11497]
Mouse Orthologue:
Syngap1
Mouse Description:
synaptic Ras GTPase activating protein 1 homolog (rat) Gene [Source:MGI Symbol;Acc:MGI:3039785]
Alleles
There are 4 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa18055 | Nonsense | Available for shipment | Available now |
sa36251 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
sa30692 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa39127 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa18055
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000093365 | Nonsense | 297 | 1246 | 7 | 19 |
ENSDART00000143867 | Nonsense | 250 | 1168 | 7 | 18 |
Genomic Location (Zv9):
Chromosome 16 (position 48691199)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 45660420 |
GRCz11 | 16 | 45627136 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTTCCAGCATCACTGGCCGTCAGTTTGTGGAGCAATGGTACCCCGTCATT[C/T]AGCCCAGTGTTCTRGCCAARGGTGGCGGCGTYGGAGGAGGGAAGATCATY
Long Flanking Sequence:
AGAGCAACTTTAGGATGTGGTAGAACGGGAGATTTGCATCACGGATGTGCAGCCGACAAATCTGCAGCAACCGCGTGATGCTATCATGTCAATATGGAAAAAAAAATCTTTAAGGAATATTTCCAGTACCTTGTTGAATCTTTGCCACGAAGGATTAAGGCAGTTCTGAAGGCAAAAGGAACCCAGTTCTAGTAAGGTGTTCCTAATAAAGTGACCGGGCAGTGTATATGCTCACAGTTAACATGAACCAAGCAGCTTATAATATGCAAAAGGAATACAAAACTGCAGGAACAGGATACAAAAATGCATAAATAAATGATAACAAATCGTCAAGCACTTTTCTTAGAAGAACCATTTAGTGCATCCTGTTATTTTAAGGCAACTAACGATGATTTGTGTCTTCATTGTAACAGGAGAAGAGCACGTACCTTGGCTTGGTCAGCATTCCCATTTCCAGCATCACTGGCCGTCAGTTTGTGGAGCAATGGTACCCCGTCATT[C/T]AGCCCAGTGTTCTGGCCAAGGGTGGCGGCGTCGGAGGAGGGAAGATCATCAATGCCTCGCTGCGGCTCAAGTCACGCTTTCAGACCATGAGCATCCTGCCGATGGAACTGTATAAAGAGTTCGCAGAGTACGTCACAAACAACTACCGGACGCTGTGTGCGGTCCTGGAGCCACTGCTGAGTGTCAAGAGCAAAGAAGAAGTGGCCTGTGCTCTGGTGCACATCCTACAGAGCACAGGGAAGGCCAAGGTACAGCTGTCTTTGACTTTTTAATAAGTTCTAATATACAGTTTAAGTCAAAACAATTAGCCCTCATTTGAATTTTTTTTTTCTTTTTTAAATAATTCTCAAATTATGTTTAACAGAGCAAGGAAATTTTCACAGTATTTCACTGCAAAAAATGCTTGTCTTGCTTAGATTTTTTGTTTTGTTTCTAGTCTAAATATCTAAAATTTCTTAAATCAAGAAGCATTTTCTAGACAAGCAAAACATATTGTCTTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa36251
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000093365 | Essential Splice Site | 762 | 1246 | 13 | 19 |
ENSDART00000143867 | Essential Splice Site | 715 | 1168 | 13 | 18 |
Genomic Location (Zv9):
Chromosome 16 (position 48704343)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 45673564 |
GRCz11 | 16 | 45640280 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCCAGCGTACTGTACTAGCAGTTCAGATATTACTGATCCAGACCCAAAGG[T/C]AAGTCCTTCTGCTGAAAAAAAACCCAGCCCATGTCGTTTAGATTTCTCAT
Long Flanking Sequence:
AATGACAAAAAGACCAGTTACTAAAACTATTCCTAAATGAAAATTAAAAACAGAAAATAGCCCTACTAAAATACCCCTATATGAAATCTTAATTAATTATTTATTTGTTACAAAAATAATACTGATATTAATTAATGAAATTTGAATCAACAGAAAATCAATAATATTAAAAACATCACCATGTGGCTTGCTAGGTTTTGAAACAGACCTTAATTTAGTGGATTATTCCTTCTGTATACAGTGAAATGGATTTTCTTCATATTCTGGTTCTCATATCTCCCACAGTTCAGTGGAGATCACTCGTCTGCCCTCTCCAACTTCTGCCATGTCCAGCGGTGGAGCTCCTCCATCCCGTGCAGGAATGGCTGGGTTTGCGGACCGCGATCATCCTCACCGAGCCTCGTCTAAAGATGTTTTCTATGGTGCCCGTCCCCCACTGGCCCGCTCCAGTCCAGCGTACTGTACTAGCAGTTCAGATATTACTGATCCAGACCCAAAGG[T/C]AAGTCCTTCTGCTGAAAAAAAACCCAGCCCATGTCGTTTAGATTTCTCATAGAAGTTGTCACTTGAATAACAGCTCGCTCCCTAGCACACGTTTCACCAGCTTTTCTGAGGGTTCGCTTTGTTCCTGTGGAGAAGGAAGCGCCACTGACCTGCTTTACTGCATGGAAAGAGGCTGCAGGATGATGTGGGTGCTGTCAGTACATACCACTGAGATTCCTTACATTAGTCTTGCATCACCATTTTGGGATTCAGGGTCCTGGCATAAGAGCTAATAATTCACCCTGAAGTTAAACTTCTGTGATTATCCTGTATGTGCGGTGTTCAAAGCAGTAAGTGCTTTAAAAAAAAAAAAAAAAAAAAAAGAAACTGTAAAAAAACTGTGAAAAAAATAAAATATAAAAATATATGACAATAATAACAATATTATTACACTTTTTAATATTATCATTATAAATAACAAATGTTACTTATGTGACTTTACCTTATTTTAATAAGTTAAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa30692
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000093365 | Nonsense | 779 | 1246 | 14 | 19 |
ENSDART00000143867 | Nonsense | 732 | 1168 | 14 | 18 |
Genomic Location (Zv9):
Chromosome 16 (position 48707798)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 45677019 |
GRCz11 | 16 | 45643735 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGGCCTCGATTGCTGGCCTCGGCAGCTACGGTGGGCTCGCAGGCTTGGGT[G/T]GAGGCCTCGGAGGTCAGCTGCGAGCCGGAGGACGTATGTCGGCCGGATCT
Long Flanking Sequence:
TTTCAGAATGTACTTATGTACCTACGCCAACATTTATTAAACAAAAATAACATTTAAAATAAGTTATAAAATACAATACTGTACAAAAATGTAATTAAATGAAAAGAAAAAATTAATCCATTTAAACTGTAAAATAAGTAAACAGGTTTACTGAAATAAGTATTACTAAATAATAAAATAGAGTAAATAATAAAATAAAATATAAATAAATATAAATAAAAATAGAGTAAATAATGACAGAAATTTATTTTCTGGGTGAATTATTCCCTTTAACCTTCACGTTACACATACACATCCTCCCCCAACTGCTGCGCACGGCAGGTATCTGCAGCGTTCTCAGCCATAGGTTGTAGGGTGTTAATGAAAATGTTTCTATGATGGACCTCCAGGATTCCAGAATGAACAGCGTCTCTAACCTGCAGTCTATGGGGGACATGCTCAACTCTTCCCAGGCCTCGATTGCTGGCCTCGGCAGCTACGGTGGGCTCGCAGGCTTGGGT[G/T]GAGGCCTCGGAGGTCAGCTGCGAGCCGGAGGACGTATGTCGGCCGGATCTGGCGGTTCCAGTATGTCCGGGGGTCTGAGGTTGAGCCAGCTGAGCCAGATGGGAACCACTACCGACTCCCTGTCCCAGCAGCAGCAGCAGCAGGCCGCCGCCCTCCGCTTTCCCCTGTCCTTCCAGAACCCTCTGTTCCACCTCGCTGCTGACGGACCGCAGCTTCACCACCAGCACAGTCGAGCTCAGCCTCCTCCTCCGCTCCTGCTGGCCCCAGAGCCGGACGGTTCTCACCCTACTTATATCCCACAGTTTGCACATGGTGGTTTCTCCCGAAGTGAGGACCTCTCCACCCTCAGACCCGGCCCTCATCTGGGCCAGCCAAGTATTATTCATTCTCACAGCTACAGCGACGACTACAGCCGTCATAACCAGAGCGACTACGGGCGACGACAGATCTCCATGCACATGCAGGTATTTGCTTGTTTTAAATTGCTTTGACTTGAGGCA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa39127
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000093365 | Nonsense | 1195 | 1246 | 17 | 19 |
ENSDART00000143867 | Nonsense | 1148 | 1168 | 17 | 18 |
Genomic Location (Zv9):
Chromosome 16 (position 48724250)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 45693471 |
GRCz11 | 16 | 45660187 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCCTGCTGCAGTATCAGAGCCGACTGGACGACAGCGAGAGGAGACTCCGA[C/T]AGCAGCAGATGGAGAAAGACAACCAAATTAAAGGAATTATTGACAGGTAA
Long Flanking Sequence:
ACACTTTACAATAAGGTTACTTTAGTTAATGTTTTTACTAACTTGAACTAAGTATGGACAAAAGTTGTAGAGTATTTATGAATCATAGTTCAACATTTGCAAATGCCTTATTAAAATGCAAATTCATGCTTGCTAACATTAGTTAATGCATCGTGAGTTAACATGAATTCTTCATTAACTAATGTAAACTAACATGAATAAATACTGTAATAATGTATTGCTTATTGTTTATTCATGTTAGCAAATGCATTAACTAAAACAACCTTATTGTAAAGTGTTACCGTAGCATCTGCTCTGCTGAAAGTCTGTCGTCTTTTTCTCTCTTCCGGCCGCAGGTGCGCGAGTATGAGGAGGAGATCCACTCACTGAAGGAGCGTCTGATGATGTCCCACCGCAAGTTGGAAGAGTACGAGAGGAGGCTGTTAACTCAGGAGCAGCAGACCAATAAAATCCTGCTGCAGTATCAGAGCCGACTGGACGACAGCGAGAGGAGACTCCGA[C/T]AGCAGCAGATGGAGAAAGACAACCAAATTAAAGGAATTATTGACAGGTAATTTGAGAAAAAAAGCAGCCTGGAGAAAGGGCGATTCTCACGTGAGCGCACTCACTGTGTATTTCCTTGCGTTCCCTTATGCAATTCTCTATATAAATAGTGGCCGTGAAAGGTATTTGGACATTTTAAGGGATAGTGTGCTTGAAATGAAAACTTACTTATTTTGCTAGCTCACATTGTTATTCTTGAGGTGAATAATTTATCCGTGCAAGTTAATCCACTGAAAGAAAGCCGTCTGTGTTGGTAATCTTCAATCAAAACCTGAGCATTTGCTTCCGCATTTGAAGTGTCCGTCCTTCTGTTGACATCAACCTGAAGGCTTGAATAGCAACTGCTTATTAGTTTGCTTGTTAAGTCGTGACGAATACTTGTTAAGTATTAACTACAATATCAGAATTAATAAGCTTAACATTAACATTAAACAGAAATCGATTGAAATTTATCCTCCATT
Associated Phenotype:
Not determined