ZMP
setdb1b
Ensembl ID:
ZFIN ID:
Description:
Histone-lysine N-methyltransferase SETDB1-B [Source:UniProtKB/Swiss-Prot;Acc:Q08BR4]
Human Orthologue:
SETDB1
Human Description:
SET domain, bifurcated 1 [Source:HGNC Symbol;Acc:10761]
Mouse Orthologue:
Setdb1
Mouse Description:
SET domain, bifurcated 1 Gene [Source:MGI Symbol;Acc:MGI:1934229]
Alleles
There are 10 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa17791 | Essential Splice Site | Available for shipment | Available now |
sa36108 | Essential Splice Site | Available for shipment | Available now |
sa32086 | Essential Splice Site, Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa17791
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000088363 | Essential Splice Site | 145 | 1214 | 4 | 22 |
ENSDART00000131249 | None | None | 279 | None | 6 |
ENSDART00000137317 | None | None | 265 | None | 5 |
ENSDART00000144691 | None | None | 128 | None | 5 |
The following transcripts of ENSDARG00000061724 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 16 (position 24098029)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 22104495 |
GRCz11 | 16 | 21908747 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CACAGTGGTTCCTCCCAAGAAGRGTTTAACTCAAGCCAAGGACCCAGCRG[T/A]AAGGGAATGCCTTTGTATCAACTGACAAACCGCACGTTTACTGTAGAATT
Long Flanking Sequence:
GCTGTTACATTGACTGATTTAATGTAGAATAATCATGTAGTATACAAATTCTTTCATTATGTGGTAAGAACTTCTAAAAAGAAAACGATATGCTGAACGAAAGCACAGCCTCAGATCAGCAAGTGCAGATTTCTTATTAGTTGCTGTAGGTTTTGGTTTGAGTGAAATCCAGGTTTTGGAAGAAGTTCAATCTCTTTTTGTTTGTTTGCTTGCTTTAAGGTCTGTGGTTCAGTGTGAAGCTCTGGTGAAGGAAGTGTACAGTAACATGGGTTTAGTGTATCGTGAAAGCAGCTCAGATGATGAGGGAGGCAAGGCAAACCCTTCTGAGGTCATTGAGATCGATGATGATGATGACGATGATGTCATTGCTGTGGGATGTTGTAAGTTCGAGGTTTTATATTATGTCATTTTATAGATGCAAAGATTTTACAGTAACATTGTGTTTTTCTCCACAGTGGTTCCTCCCAAGAAGAGTTTAACTCAAGCCAAGGACCCAGCGG[T/A]AAGGGAATGCCTTTGTATCAACTGACAAACCGCACGTTTACTGTAGAATTTGGTAACTTCATTAGGAATCCACATGATTAAATTGAATTAATGTGAGGAACTGAGCTGTGCGCCATTTGTTGTTGGTTGCATACTGCATTAACAATCTATTAAATAGAATCAAAACTCTTTAATTTTTTTATTGAGAATGTATAACGCAATAGCTACTGTTTTATTGCCCAGTCCTAATTTTTAAAGTGTTCAGTTGATGTTTCCTCTTTGTGTGTTGTGTCTGGATTTCATTTGAAGCTTAAGGAGGCTTCAGCTGCCCTTCAAAGAACGTCTCAGCAGGTGCAGAACCTGGCTCAGACTGTCAACAGAACGGCCCAATCAGGGGTCACTACACCAGTTAAAACAGGGGGCCCTCCCGGACAAGGTCCTCTAGCTGTTCCAGCAGTGTTTATGTCCTCAGCCCCAAGAAACACGCCCACTCAACCAAACCCTAATATAAAACAGGACAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa36108
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000088363 | Essential Splice Site | 311 | 1214 | 7 | 22 |
ENSDART00000131249 | None | None | 279 | None | 6 |
ENSDART00000137317 | None | None | 265 | None | 5 |
ENSDART00000144691 | None | None | 128 | None | 5 |
The following transcripts of ENSDARG00000061724 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 16 (position 24096800)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 22103269 |
GRCz11 | 16 | 21907521 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGGGTTTGTTGATTTAAATGCATTGCATTGCTGACTTTTTGTATTTTGCA[G/A]GTTCCTGATCTTTTTTGATGATGGTTATGCCTCATATGTGGGCTTGCCTG
Long Flanking Sequence:
TACATCACATGGGTCTAACAAAAAAACAAACATAAAACAATAACAGTTAACATGAATCACACATTAACAATAACTATTCAAAACATCAACAAGCCTGTGTTTCAGTGTCTAAGTCATTTGTACTTTTTTTTTTTAAAGCGTTTAGTGAAATCAATGGCCTGCTATGAGTGCTTCGGATGACAAAATATTTGTTATTTTGGTATCTTATTTATTAACTTTTTTAAACAGGCAACAATCTTAAGTACAAAGTCAGGTTTGAAAATAAGGGGAAGAGTCTCCTCTCTGGGAACCATGTGGCCTTTGAGTACCACCCAACACTAGAGAGACTGTTTGTTGGAGCCCGAGTTGTTGCCAGGTACAAGGATGGTAATCAAGTCTGGCTGTATGCAGGCGTAGTCGCTGAGATGCCCAACAGCAAGAACCGTATGAGGTAAGATTAACACAGGACTTTGGGTTTGTTGATTTAAATGCATTGCATTGCTGACTTTTTGTATTTTGCA[G/A]GTTCCTGATCTTTTTTGATGATGGTTATGCCTCATATGTGGGCTTGCCTGAGCTCTACCCTATCTGCAGACCATGTAAGAACTTTTTCTTCTTCCTTTTTTGTTTAATTTATTTTATGTTTTAGTATTTGATGTCAAACACCTTTTGTAATGCTGATCTTTTTAATTGGAATTCCATTTTTATCAATAGACAAGGTTTTAAATAAATAATACATTTCCATGAATGGTTTTGAAATAAAAATGGTGTTAATTCCACTAAAGGAGTAGTTATAATGGCTCTGTCTCCTCCTGTTTGCCTGTATTCAGTGAAAAAGACCTGGGAGGATATTGAGGATGCGTCCTGCAGAGATTTCATTGAGGAGTATATCACATCATATCCTAACAGACCCATGGTTTTACTGAAGCCAGGGCAAATTATAAAAACTGAATGGGAGGGAACATGGTGGAAGAGCCGTGTGGAAGAAGTGGATGGCAGCCTTGTGAAAATGCTCTTCCTGGTTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa32086
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site, Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000088363 | Essential Splice Site | 925 | 1214 | 16 | 22 |
ENSDART00000131249 | None | None | 279 | None | 6 |
ENSDART00000137317 | Splice Site | None | 265 | None | 5 |
ENSDART00000144691 | None | None | 128 | None | 5 |
The following transcripts of ENSDARG00000061724 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 16 (position 24089091)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 22096757 |
GRCz11 | 16 | 21901009 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGTAAATCCAACAAGATGGAGGAGCGTAACAGCAGCACAACTGGTAAAAG[T/C]GAGAGACCTACGCACACATCTGATTGATGTACTAATGGTTGTGTAAAAGC
Long Flanking Sequence:
TATTCATGTTCAGTTATTTCATGTTTAAAGTGATGAAAATAAGTGCTGAAAATTCTTTGCTATATAAGTAAAATTACTGAATTGAGCCTGAGAAAAATGCTAAACGATACTGCAGTATAAATTGTTTTTAAAAAGTATTACACATCCCAACTTCAGTTCAATAATAAGAGAATGACTCCAGTGTTTAGTCTTGTATTAGATCTCCCTTTATATATATATATATATATATTTATTTATATATATTTTGTTTCTTTCTCAGGAAAGATCCTGACAGATGACTTTGCCGATAAAGAAGGTTTGGAAATGGGCGATGAGTATTTTGCCAATCTAGACCACATTGAGAGCGTGGAGAACTTTAAGGAAGGTTACGAGAGCGAAGCCCACTGCTCGGACAGCGAAGGCAGCGGTGTGGACATGAGCAGAGTTAAACTACCTGCTTCCTCCCGACACGGTAAATCCAACAAGATGGAGGAGCGTAACAGCAGCACAACTGGTAAAAG[T/C]GAGAGACCTACGCACACATCTGATTGATGTACTAATGGTTGTGTAAAAGCGGAAACATCCAACACAATCTCACGGCAATTCGTAACTTTTTCATTTAGTGGCTAATTCGTTTGAATTTGTAAAATTTTGTAAAATTTGCTCATCACCCAATGACGGTTGGTGTTGGGTGCCATGCCTCCTTTTTAAAATTGTACATTTTTGTATGACTGAACTCGTACGAATTAGCCACTAAACTGACAAAACGTAAAATACTTGTTTCCTCGTGAGATCAGGCTGAAACATCTAATCTTTCCTTGGAGAACACCTTCTGCTTACAAGTCCCACTGTCAAGAAACTTTTTCTTTCAAGTCTTCTTTCACACTAACCACAAACATGATCCAAAATCCTTGTATGTTATGTAGTTTGCATTTAAAGTATGCTAAATGTTTATTTATATTTATGCATGTGGTTTTTATTTTTTAATTGCAGTTAATTTTAAACAAAATATTTTTAGATTTTCT
Associated Phenotype:
Not determined