ZMP

zgc:92432

Ensembl ID:

ENSDARG00000041729

ZFIN IDs:

ZDB-GENE-040704-13, ZDB-GENE-040704-13

Description:

beta-1-syntrophin [Source:RefSeq peptide;Acc:NP_001002175]

Human Orthologue:

SNTB1

Human Description:

syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) [Source:HGNC Symbol;

Mouse Orthologue:

Sntb1

Mouse Description:

syntrophin, basic 1 Gene [Source:MGI Symbol;Acc:MGI:101781]

Alleles

There are 3 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa36075	Nonsense	Mutation detected in F1 DNA	Not yet available
sa45569	Essential Splice Site	Mutation detected in F1 DNA	Not yet available
sa16267	Essential Splice Site	Available for shipment	Available now

Mutation Details

Allele Name:

sa36075

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000061164	Nonsense	76	515	1	8
ENSDART00000125691	Nonsense	76	515	1	7

Genomic Location (Zv9):

Chromosome 16 (position 17558078)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	16	15372648
GRCz11	16	15262768

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CCAACCGGACCCCACCAACAGTCCCAAAACCGGAGCGAGAACTCCTTTTT[C/A]GGATTCACAAGTGCCCGAAGCGATTGCGAACCGCAAGAGATGCGTCAAAG

Long Flanking Sequence:

GTAATCTCCGTGTGGGATGTAATGTATCTATCAAATACATCGATGTATTTAAAAGATACATCCCACACGGAGACTTGAAACGAAACATTTTCTGACAGCGAGAGGCAGTTGAGCATGGCCACACAGGACATCTCAGACATTTGCTCCACCCAAAAAGGATATGCATGTGGAGGGGCTGAAACTATTCAACCTGAATCACAACTTTTTCCCTGTTCGGGGGTAAAGTCCTGTACGAGTGTATGAAATCACATGGCATTTTAAGAATGCTTCAAAGATGGCGGTTTGCGGTAACAGAGTGCAGAAAAGTGCATGTTTGGAGGTGCTGGTGCGGGAGCAATGGCACGCGGTGCTGGCGAGTTTAGGGGACGAGTCTCTGACGCTCAGCTGCGAGGATCCCGCGGCGGACACCAGCGTCAGCCTGAACGGCATCACCACCAACGGCTCCTACGACCAACCGGACCCCACCAACAGTCCCAAAACCGGAGCGAGAACTCCTTTTT[C/A]GGATTCACAAGTGCCCGAAGCGATTGCGAACCGCAAGAGATGCGTCAAAGTGATCAAGCAGGAGGTCGGTGGATTAGGGATCAGCATCAAAGGCGGGAAGGAGAATAAGATGCCTATTCTCATTAGTAAGATATTCAAGGGTCTGGCCGCGGATCAGACTCAAGCGCTGTACGTGGGCGACGCGATACTGTCCGTGAACGGGATCAATCTGCGGGACGCCACGCACGACGAGGCGGTGCAGGTGCTGAAGAAAGCGGGGAAAGAAGTTATGCTGGAAGGTAAGGACGAGGAAAACGCCAGAAAACCTGCCAGGCAGGCTGAGTTTTGATGAGGCTATATGGGTTATTATCAGGTGTGTGGATGAACCTGTTGAAGTGACACGGGCAAGGTGGATGCTGTATCATAATGCATACATAAAAATATATGCATTCGTGTGGTTATAACTTTATATACACATAACATTTTATAGTTTTCCTCTATATATTGCGAGGAGTTGTATT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa45569

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000061164	Essential Splice Site	241	515	2	8
ENSDART00000125691	Essential Splice Site	241	515	2	7

Genomic Location (Zv9):

Chromosome 16 (position 17537373)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	16	15351943
GRCz11	16	15242063

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AAAATGTGCTACATCACACGCAGTATGACTGTGCCTGACCCAGAAAACAG[G/A]TACAGCTGCTTTTGGATATAGTATCCGTTTGTTAAGGCCCAATCCCAATT

Long Flanking Sequence:

TATAGGATACTATGCAAATGTGCGGTGAATTGATTTCCTCGCTCAGGATAGCTGTGGGAGTGAAGCGGTTTGCGTAGGGGTTTCCTGCTTTCATTTTTGACTGGTTAGGGCCTAGTGCACACATGTGATGGAAAATTAACCTGCAGAGCTGTTTGATGTTGATGTGTTTGAATATGTGCATCTAATGGTATTGTTTTTAAAGAGAATATGGGAACTGTTCACAGATACTCTCAGTATTTGTGTGACCCTTAAATTACCTCTTTCTTTGTTTTGTCTGTTTCAGTGAAGTATATGCGGGAAGCGACGCCTTATGTGAAAAAAGGCTCACCGGTGTCTGAGATTGGCTGGGAGACACCCCCTCCTGAGTCCCCTCGTCTTGGCAGTCCTCACTTCGAGCTCCCCAGCCCTCCGTCACAGTGCTTGCAGGGTGACCGCAGATGTATCCCCCTCAAAATGTGCTACATCACACGCAGTATGACTGTGCCTGACCCAGAAAACAG[G/A]TACAGCTGCTTTTGGATATAGTATCCGTTTGTTAAGGCCCAATCCCAATTCTGCCCCTTAGCCCTTCCTCTTAACCCTACCCCTCATTTTGCATGTTCACGTGAAGCGGTACAATTTCTCAGAATATACCATCTACTATTGCAGCATAGCTGCACATGGACGTAAGGAGATGCACAAACTAGTATTTTTTTGTCAATGTTCTGAATTTTTACAACAAACAAGCATATGTTTTTTATGCATTCACGTGCATTCATGTTTTACCATCATGCTTAAAAAAAAAAAAAACACTAAAATAAAAAACACTAACTTTCGCTATCTATAATCCATAATAATTATTCCTGTATAGCAGTCCCACGACATTCGATGATACTCGAATACCCTGTCAGAAAAGTCTAGTGTCTGGAAATGACCTTTTTTACAGTGTCTAGTATAATGTTAATGTTGTTTTGGTGTATTTAAATATAAAATGATAAATATAGTCATGGTGGTAAAGGAATGCA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa16267

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

A > T

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000061164	Essential Splice Site	241	515	3	8
ENSDART00000125691	Essential Splice Site	241	515	3	7

Genomic Location (Zv9):

Chromosome 16 (position 17510419)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	16	15324989
GRCz11	16	15215109

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

TATTAATTCAACCAGAAGGTTAATNATGTTTCTTTTCTGTCATTGTGTTTC[A/T]GACAGGTGGAGCTGCACTCCTCTGATGCTAAAAACACAATAGTGATGAGA

Long Flanking Sequence:

CAACCAACAAGATTAGTCGAGCGAAGGTGAGGGCGGAGTTAAAAACGCGGCCATTAGGTCGAACACTTCGAGGCTTGTAGTTTGCTGCATGATGCAGATCACATGACAGGATCAGCTTACAGACATGTGATTTGAATGACACGAGTTTAGGATTTAGGATAGGACAAATTTAGGATTGATATACAAGTAAAAAAAAAAAAATATTCGCAGACAACGTGTGTTCCGAACCGTGCGTTGTGATCTGTACGACATTGATAACGACATTGTTCAAAAGGCCATGATCTATACTCATTGAGTATTCACCGTACTCGTATAACCACAAACGTTTTGGCTGCATGCCTTCCCCAGTGTGTGAAAGCCCACGATCATCATGAAGGAATTACATATTGAGAATTGTCTTTTTTTTTTTTCTTGAAAAGGTCTTTGATTGGTCAGTGAAATTACTCTTGTTATTAATTCAACCAGAAGGTTAATATGTTTCTTTTCTGTCATTGTGTTTC[A/T]GACAGGTGGAGCTGCACTCCTCTGATGCTAAAAACACAATAGTGATGAGACATACAGACAGCTCCTCTGCCCAGACCTGGTTCACTCTCATGCAATCCGTCATCACAAACCTCACCAACAAAGTCATCAGTGAACTACGAGAACATGCGGGCCGACACGGCATCATTGGGAGTCGAGAGATCCGACACCTGGGATGGCTAGCGGAAAAGGTGAAGCCGTTTTAAATTCTTCATTTTGTTTGGGAGGTCTTAAAGAATGGTAACAAATATCCCTTTCATTTTATCACAATATACATTTACTTTTAAACTCTTCGTTTCAACATCTGCATCTCTTTATAAATGTGGTGTATGCACAAAATGGGTGAGCAAATGTGTGCATGTCCACTTCACAATAATAAGTTAATTGGAGAATGTGCGCAGCCCTTACTATACACTAAATAAGCAGATTTAACTTAAACATTGACTATGTTTTTTATGGACAGCAGTAATCGAATAAATTGC

Associated Phenotype:

Not determined