ZMP
cnot10
Ensembl ID:
ZFIN ID:
Description:
CCR4-NOT transcription complex subunit 10 [Source:UniProtKB/Swiss-Prot;Acc:Q08CL8]
Human Orthologue:
CNOT10
Human Description:
CCR4-NOT transcription complex, subunit 10 [Source:HGNC Symbol;Acc:23817]
Mouse Orthologue:
Cnot10
Mouse Description:
CCR4-NOT transcription complex, subunit 10 Gene [Source:MGI Symbol;Acc:MGI:1926143]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa36039 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa2836 | Nonsense | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa36039
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000081407 | Essential Splice Site | 68 | 624 | 4 | 18 |
| ENSDART00000104172 | None | None | 624 | None | 19 |
| ENSDART00000125111 | None | 79 | 748 | 3 | 19 |
Genomic Location (Zv9):
Chromosome 16 (position 8925189)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 16 | 7788443 |
| GRCz11 | 16 | 7705789 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACAATGAACAAAGCGGTCACTGAGTTTTATAAAAGTGGGCAGACAACAAG[C/T]AGCACCTTGAAGCAGACGCTGATGACCTTGAAGAATCAGGTATGGTATCA
Long Flanking Sequence:
AGCATTTTTGCGGGTTTAAAACCTTGACTTTTTCAAACCTGGTATACCTTGTAAACGGTTATTGCCCAATGCCTAGTCACAAGTTGTTTTCACTGAACGAATGTGCGAAAATAAAACAATCTTTACCTCAATTGAATACTGCATGAGTTGAATATGTCCTGTCATTAACTGCATCTGTTTTCTTTTAAGATCAATCTGGTGACATGAAGCATGACATCGCTTCATCCCCTGGGATGTCGGATTTAGAGAAAGAGGTTGCAACCAATGCTTTCGAGGCGTTTAAGGTAAATAGTTATTATATAGATGTCTGTGAAAGACATATTTTTTGTGATTATTTTTTCCAGATCTCTGTGACATTATATTGCGTTTTTCTTCCAGACTGGAAGCTATGACGAGTCTCTGAAATATCTTGACAACCTTCAGGAGCTGAACAAAGAGGACTACAAGATTACAATGAACAAAGCGGTCACTGAGTTTTATAAAAGTGGGCAGACAACAAG[C/T]AGCACCTTGAAGCAGACGCTGATGACCTTGAAGAATCAGGTATGGTATCACTGATGTCTCTATTAAGGGATGCTAAAAGTGAAGGCTTTGAGTTGGAGAGGAAAATTAAGGATGCACCAAAATGATATTTATTTTTTAATCATAGGGTTTAATCTTTTTTTAATAAATTATTCAATATTAACATATATAATATATTTTTTGAGATAAATGGCACATTATGGACACTGTTTTATTCATCTCTTTCTATATATTAAACATTGATTTAGCTTTGACATATGACATCAGTATGATTCAAATATTTTAGAAAAAAGTAATTTTTGATCAATTTATTACATTCTTGTAAATAATAGTCATTTTTATTTACCAACATCTTGTGGAATGATTTATACCATGATGCAAGAAATCTAGTCGAGTCCCGCAGCTCCCATTGTACAGCCGCAGGACTCGACTAGATTTCTTGTATCATGGTATAAATTTCTAAATTAAGTGTGGGAGCGGTC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa2836
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000081407 | Nonsense | 100 | 624 | 6 | 18 |
| ENSDART00000104172 | Nonsense | 100 | 624 | 7 | 19 |
| ENSDART00000125111 | Nonsense | 224 | 748 | 7 | 19 |
Genomic Location (Zv9):
Chromosome 16 (position 8930941)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 16 | 7794195 |
| GRCz11 | 16 | 7711541 |
KASP Assay ID:
554-2465.1 (used for ordering genotyping assays)
KASP Sequence:
AACAGCTGTANNNNGTTTGTTGTGTTTGTACTTGCAGTATAAAGTGCGAGCCTA[T/A]ATCCAGATGAAGTCMCTGAAGGCCTGCAAAAGGGAAATCAAATCTGTGAT
Long Flanking Sequence:
TATTCAATGTTTACAATGCAAATCCAATTAGATCCACTTATTTGGTAAACAAAGCAAGTCTCTTATATAATCTATCTACTGAAAATATGACTTAACCGTATGTATTTTTAAATAAATCATATAAACATTTTAATATAACTATTATTATATCACATTAATATTAGTGAAATTAATTTAGAAACTGAATAAATATAAATTTACATGTTTACACAAGTAAACGAACTCAATGATGGGCTAAAAATCTGCGGAAATCTGCGCCCACAGATTTTGTGCGGGCTTACTTATAAGTGGGTTTTGTTTTGATCCTATGCTATATAAATAAAATAAAATACATTTATTTTAATGGGAGTGACGTTGGGGAGTTGGGGTGAACCTCTATCACAATGGTAGGGGAAACATTGAGTCCTTATTAAAAAGACCTTTATATATTTTCAGCTAACAGTCATAAGCAACAGCTGTAGTTTGTTGTGTTTGTACTTGCAGTATAAAGTGCGAGCCTA[T/A]ATCCAGATGAAGTCCCTGAAGGCCTGCAAAAGGGAAATCAAATCTGTGATGAACACATCTGGAAATGTGAGTAAATTCACATGATGTACATGAACTGTAAATGTCCACATGTAATACAGTATATGTGCCATATACATTTAGTTAATTGACTGTATTTACACATTCCTCCCTCAGTCTGCACCATCGCTCTTCCTGAAGAGTAATTTTGAGTATTTGAGGGGAAATTATCGTAAAGCTGTGAAATTACTCAACAGTTCAAATATTGCAGAGCACCCAGGACCACTGAAAACAGGTACACAACCTTTATAATATGCACCTCATTAAAAACAAAAAAACACCTATGGATGTTATATAAGTGTTTGTTTGTTTGACACCGGGTTCTGCCAAAACATGTTTGCTTAATTGGTGTCTAAGAAGCAAGCCACCAGACTTGACTGATTCCCTAAACCTTTTAACCTTGTGTTTCTTTTGTGTTGTACAATCAACTGAAACTGAATGAG
Associated Phenotype:
Not determined