ZMP
lrtm2
Ensembl ID:
ZFIN ID:
Description:
Novel protein [Source:UniProtKB/TrEMBL;Acc:Q5RH06]
Human Orthologue:
LRTM2
Human Description:
leucine-rich repeats and transmembrane domains 2 [Source:HGNC Symbol;Acc:32443]
Mouse Orthologue:
Lrtm2
Mouse Description:
leucine-rich repeats and transmembrane domains 2 Gene [Source:MGI Symbol;Acc:MGI:2141485]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa40285 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa40285
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000066893 | Essential Splice Site | 20 | 306 | 1 | 3 |
| ENSDART00000138820 | None | None | 351 | None | 2 |
Genomic Location (Zv9):
Chromosome 4 (position 19195309)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 4 | 20538644 |
| GRCz11 | 4 | 20259619 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CACTGCACCTACAGTGGGTCGAAGGAGGAGAGGAAATCCGGACAGCCAAG[G/A]TGAGCCCAAAACACACACACACATGCATTTGCTCTTCTGTAGGGGTTGGG
Long Flanking Sequence:
TTCATGCACTATGTGTATGGTGTTTCCCAATACTGAGTTGCGGCTGGAAGCTCATCCACTGCGTAAAACATATGCTGAAATTGTTAGCAATTCATTGCACTGTGGCGACCTCTCAAATAGAGACTGAGCCGAAGAAAAATTAATCAGTGAATGAATTATATAAGAGACTTGTAATTGGATTTGCATTGTAAACCTGTTCAAAAGGTTATTATTTTTTATTTTATGTTTTAAGTATTTAGTAACTAGATGCTCAAAATCATTCTGCATAAGAGCATGCTTTCACCTTCAGAAGTCATTTAAGTCTTGAAAAAACTGAGTATCCTTTAAACTCTCTCTGCAGTCTGGTCACTGGCCTCGTATCACTGCCTGTGGAGGCTGGCATCAGGGCCAGCTGATGCCACAGCAGATCTGAGGCAGCTGCAGTCGTAGAAGCGCAGACATGCAGCTCTGCACTGCACCTACAGTGGGTCGAAGGAGGAGAGGAAATCCGGACAGCCAAG[G/A]TGAGCCCAAAACACACACACACATGCATTTGCTCTTCTGTAGGGGTTGGGCTTCTACAGTATTTAAGGACAGACTCCAATCATAGCTTTTAAGTGCTTTTTGTCCAACTAGTGACTAAACAATTATTTACATATCAATAGCATGCAAACTGATACATTTCAAAAAAGGATCTGTTTTTACTAATGTGGAGGAATGATATTGTGTGTTGACATATGTGTCTGTGTGGGTGTTTATAGCGTGGTATAGAGTGCGGGAAACATCACCAGCTGCCCCAGCAACAGATGGATAACATGGCTTTAGTTCATGTGTGTCTAATTAAAGATCTGCATAAGTCAAAAAAGAAGCAACACACACATACATGCATACAGTACTTGCATACACAGTTCAGCTGCATTGTCTTATATACCATACTTATTAATGTATAGTGAAAAAAAAAAATCACCTGCTGCTTTAAGGCTCATTGACACCAAGGACATTATCTATAACCGCACAGATATATT
Associated Phenotype:
Not determined