Busch Lab

ZMP

LOC561540

Ensembl ID:
ENSDARG00000040627
Human Orthologue:
GRIK1
Human Description:
glutamate receptor, ionotropic, kainate 1 [Source:HGNC Symbol;Acc:4579]
Mouse Orthologue:
Grik1
Mouse Description:
glutamate receptor, ionotropic, kainate 1 Gene [Source:MGI Symbol;Acc:MGI:95814]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa35987 Essential Splice Site Available for shipment Available now
sa11428 Essential Splice Site Available for shipment Available now
sa35988 Nonsense Available for shipment Available now
sa22721 Nonsense Available for shipment Available now
sa8819 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa35987
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000031793 Essential Splice Site 123 906 3 16
Genomic Location (Zv9):
Chromosome 15 (position 41166326)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 42681492
GRCz11 15 42637557
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGTTGAGGTAAATGCTTATACTGTTTTTTTGTGTGTGTGTGTTGTGGTCA[G/A]CCTGTGATCAGCTGGCTCTCGGTGTGGCCGCAGTGTTCGGGCCGTCCCAC
Long Flanking Sequence:
CACGCCAATCCGCGTCTGTTCTGAAGTGAATTTGACACGCGAATGAAGCGGGGTTTGACGCGCGAATGAAGCGAGCAACCTCCAATGTTCACACAACTATTTACGCGCGAATCGCAATTTATCCTCGCGTTACGCGTCTGGTGTGAACACAGCATTAGACTAGCTCCTGTTGGTGTCATTAATCTGGCAACCCGTGCTTGCGTTTGTTTTGATCCAGGAATGCAATACCTAGTCCAACCACTGGTCAAACTTACATACTGCACCTTAATGAACATAACTGGCAATGTAGAGCAGTGCAGTGTGCGGCTGTATAATTCACAAAAATAGCATTGCATTGGAGATATTTTTTTCAGACTACACTTTAACAGACAAGATTTCTTTTTATTAATCAGAGAGCTGTTTCACTTCTTCACAATAGGAAGAAAACACCATTGAAACGTGTTTAATTTGAGTTGAGGTAAATGCTTATACTGTTTTTTTGTGTGTGTGTGTTGTGGTCA[G/A]CCTGTGATCAGCTGGCTCTCGGTGTGGCCGCAGTGTTCGGGCCGTCCCACAGTTCTTCAGTGAGTGCGGTTCAGTCCATCTGCAATGCGCTGGAGGTTCCTCACATCCAGACCCGCTGGAAACACCCGTCCGTGGACAACAAAGACAGCTTTTACATCAACCTGTACCCGGATTACGCCTCCATCAGCCGCGCCGTGCTGGACATCGTGCAGTTCTACAAGTGGAAAGCCGTGACGGTGGTTTACGAGGACGCTACAGGTGCGTACACTCGTTACAGACGGGTCCAATACATTAAAAAAAAATTTAAATTAAATTAAATTAAGTTAAATTAAATTAAATTAAATTAGGCAACGCAGTGGCGCAGTAGGTAGTGCTGTCATCTGACAGCAAGAAGGTCGCTGATACGAGCCTCAGCTGAGTCAGTTAGCGTTTCTGTGTGGAGTTTGCATGTTCTCCCTGTGTTGGCATGGGTTTCCTTGGGGTGCTCTGGTTTCCCCCAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa11428
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000031793 Essential Splice Site 287 906 5 16
Genomic Location (Zv9):
Chromosome 15 (position 41178329)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 42693495
GRCz11 15 42649560
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GTCAATGGGCATGATGACCGAATACTAMCACTTCTTCTTTACCACTCTGG[T/C]AAGTTTCCTATATTCTKTSTTTGTGTGTTTGTCCACAAGTTTTTATATCC
Long Flanking Sequence:
AAATTAATTTTGCTACACACATCCCATGCTGTCATGCTGAAAATGTAATCCTGCGTTTCCTAGACGCCAGTGTAAATGCATTTAGGACAAATAACATTTAAATGATCATTTTGCTACAGTTTCTGCTTGTACTTTATTCACATCAAATTCAGTTTGTGTATAGCATTTTCAATTTAATTTTGCTACTTATAAAGCTTTAAAATGTGGATACAATTGACATATTAAAACAGTGTTTGAAATGAGAAATGCAAACATTGTAATTTAACTTACATTTTCATTCTGCACCAAACATTGCTCATATGTCTTGGAAATGCAAATTCAAATACAGAAATACATTGCCATTTAACATATTGCATTGCCATTTTGCATATTACATTTTGAATTGAATTATGCTACTCATATGCTTCCATATTTTCATGCTCTTGTGTCTGTGTTTGTGCTATAGCTGTTGTCAATGGGCATGATGACCGAATACTACCACTTCTTCTTTACCACTCTGG[T/C]AAGTTTCCTATATTCTGTCTTTGTGTGTTTGTCCACAAGTTTTTATATCCCAGTGGGGGACTTAAAATCGAATGGCGTCATGGCGGTCTAAATTGTTGCATGAAAATGTATCTTATGTGACAGGATCTGTATTCGCTGGACCTGGAGCCGTTTCGATACAGTGGTGTGAACATGACTGGTTTCCGTCTGCTCAACATCGACAATCCTCAGGTGGCGTCAGTGGTGGAGAAATGGTCCATGGAGAGACTGCAGGCTCCACCCAAACCTGAGACCGGCCTGCAGGATGGAATGATGACAGTCTGTTTATCCTATAAATATATACACTATCACATTACATAAAGAGAATTAGGGCTGGGCGATATGACAAAACATCTAATTTCAGGATAGAAGTCATCTCATATCCTGATCACGATATACTGTAGCACAATTTCTGTAAATTCAATTAGTTAATAGTTTACATAGATTTACCACATGTAAGGGACTGTACACTCACCGGCCAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa35988
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000031793 Nonsense 290 906 6 16
Genomic Location (Zv9):
Chromosome 15 (position 41178461)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 42693627
GRCz11 15 42649692
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGCGGTCTAAATTGTTGCATGAAAATGTATCTTATGTGACAGGATCTGTA[T/A]TCGCTGGACCTGGAGCCGTTTCGATACAGTGGTGTGAACATGACTGGTTT
Long Flanking Sequence:
TTTATTCACATCAAATTCAGTTTGTGTATAGCATTTTCAATTTAATTTTGCTACTTATAAAGCTTTAAAATGTGGATACAATTGACATATTAAAACAGTGTTTGAAATGAGAAATGCAAACATTGTAATTTAACTTACATTTTCATTCTGCACCAAACATTGCTCATATGTCTTGGAAATGCAAATTCAAATACAGAAATACATTGCCATTTAACATATTGCATTGCCATTTTGCATATTACATTTTGAATTGAATTATGCTACTCATATGCTTCCATATTTTCATGCTCTTGTGTCTGTGTTTGTGCTATAGCTGTTGTCAATGGGCATGATGACCGAATACTACCACTTCTTCTTTACCACTCTGGTAAGTTTCCTATATTCTGTCTTTGTGTGTTTGTCCACAAGTTTTTATATCCCAGTGGGGGACTTAAAATCGAATGGCGTCATGGCGGTCTAAATTGTTGCATGAAAATGTATCTTATGTGACAGGATCTGTA[T/A]TCGCTGGACCTGGAGCCGTTTCGATACAGTGGTGTGAACATGACTGGTTTCCGTCTGCTCAACATCGACAATCCTCAGGTGGCGTCAGTGGTGGAGAAATGGTCCATGGAGAGACTGCAGGCTCCACCCAAACCTGAGACCGGCCTGCAGGATGGAATGATGACAGTCTGTTTATCCTATAAATATATACACTATCACATTACATAAAGAGAATTAGGGCTGGGCGATATGACAAAACATCTAATTTCAGGATAGAAGTCATCTCATATCCTGATCACGATATACTGTAGCACAATTTCTGTAAATTCAATTAGTTAATAGTTTACATAGATTTACCACATGTAAGGGACTGTACACTCACCGGCCACTTTATTAGGTACACCGTACTATTACCAGATTGGACCCCCTTTTGCCTTCAGAACTGCCTTAATCCTTAGATTCAGCAAGGTACTGGAAATATTCCTCAGAGATTTCGGTCTATATTGATATGATGGCATCCC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa22721
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000031793 Nonsense 431 906 9 16
Genomic Location (Zv9):
Chromosome 15 (position 41189925)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 42705091
GRCz11 15 42661156
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCTGATCATACATGTCAATGTGGCCTTTCTGTTTTCTCTTCACAAGCCGT[T/A]GGAGAGCGGCCGTTTTAACAAAGTGTGGAAGAAGGTTGGTATTAAACACT
Long Flanking Sequence:
TTCTACTTTACTTTTCGTTCCATTTAAATTATCTTCGCCTTTATTTCACCTTTACTATTCTTTGCTCTGCCTTTTCTTCACCTTAACTTTACCTTTATCTTAACTTTGCTTCACTCTTCTCCTAAACTTTACTCGAATGCACTTCACTTTTGTTTTGTTTTGTTTGGCGATGATCCCAATGCTGCATCTGGCATCCAAACTAACACTGAAAAAACAGATGAGCACTGTGAGTTTGATCTATTAATGGAAAAAAACGTAACACTCCATTAATTTAATGTGTAATTGTGTTTTGTGTGCTCAGGCTCAGTGGAACGGTCTGACCGGTCAGATCATCATCAACAAAACAGACGGCCTGAGGAAAGACTTCGACCTGGACATCATCAGCCTGAAAGAGGACGGTTTGGAGAAGGTAAAAACAGCCCACGATCTCAGTTCCATCGTCTGCTTCTGTCTGATCATACATGTCAATGTGGCCTTTCTGTTTTCTCTTCACAAGCCGT[T/A]GGAGAGCGGCCGTTTTAACAAAGTGTGGAAGAAGGTTGGTATTAAACACTTAGAAATGTGACGTGTTGGTCCCTTCTCTCCTTCAAAAAGCACTGCTGATGAACTGTAGTACCATGGTAATGATTTCATGAGATATGCAGTTACCATGTGCATACCATTACCATGGTATATTTTTCATCTGTGCCCCTCAACCTGAAATTTAATTTAATTTAATTTAATTTAATTTAATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTTATACATTTTTTAAAATTAATAAAATTTTATTAGAATTATTTTATTTGAATTTATTTTCTTTATTTTATTTTCTTTATTTAAATTTATTTGAATTTATTTTATTGAAATTATTTTATTATAAATTAATTAATTTTATTAGTCTTTATTTTATTTTTACCTATTTTAACTTATATGAAACCAATAATACTGTGTAACAACAAATGTAATTATAGTTGTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa8819
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000031793 Nonsense 742 906 15 16
Genomic Location (Zv9):
Chromosome 15 (position 41204993)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 42720159
GRCz11 15 42676224
KASP Assay ID:
2260-8969.1 (used for ordering genotyping assays)
KASP Sequence:
TAATGCTCTGAYGCTTTCATTGGTYTGCAGAAGTCRAAGATCTCTACATA[T/A]GAGAAGATGTGGGCGTTCATGAGCAGCCGGAAGAACACAGCRTTGGTRAA
Long Flanking Sequence:
GCTCAGTAGTTAGCACTGTCGCCTCACAGCAAGCAGGTCTCTGGTTTGAGTCCTGGCTGGCCCAGTTTCTGTGTGGAGTTTGCATGTTCTCCCTGTGTTGGTGTGGGTTTTCTTCAGGTGGCGTCCCCCACAGGCCAAACACATGCGCTATAGGTGAAATGAATAAGCTAAATTGGCCGTAGTGTATGAGTGTGTGTGTGTGTGTGTATGAGTGTATATGGATGTTTCCCAGTTCTTGGTTGCAGCTGGAAGGGCATCTGCTGCATAAAAAAATATGCTAGATAAGTTGGCGGTTCATTCCGCTGTGGCGACCCCTGCTTAATAAAGGGACTAAGCCGAATGAAAAAGAATGAATGAATAAATATACATACTCAAATATTAAAAGTTCCTCATATTTTGATGGTTTAATTCATATTGTATGACATTATATTCAATATATTCGCTGAATTATAATGCTCTGATGCTTTCATTGGTTTGCAGAAGTCGAAGATCTCTACATA[T/A]GAGAAGATGTGGGCGTTCATGAGCAGCCGGAAGAACACAGCGTTGGTGAAGAACAACCGCGAAGGCATCCAGCGGGTCTTGACCACTGATTACGCTCTCCTGATGGAGTCCACCAGCATCGAGTACATCAGCCAGAGGAACTGCAACCTCACGCAGATCGGGGGACTCATCGACTCTAAGGGATATGGCGTCGGCACTCCCATCGGTAAACTGAAAATTTATGAGGACATGCCAGGGCTTTAGGTAGCTCTGCATTTAACCACACACTGTATAATCTACACCTTCATTTAACTTAAAAACTAACTATTAAAAAAAATAAATAGTAATGTTACCTTCTGAGAACTTCCTGATGCTACACATGTAGTTTATACAGATTAATGAAAGTTTGATGTATTTTTGTCTTAATGGTTCAGTAAAATCACTGTGCATTGAGACTATAACCTTCTTTTCTTCCATTTTGTTTACAATAATGAGAAAACTTCCGTCACAGAAATGTAAGC
Associated Phenotype:
Not determined