ZMP
zgc:153766
Ensembl ID:
ZFIN ID:
Description:
hypothetical protein LOC751741 [Source:RefSeq peptide;Acc:NP_001038916]
Human Orthologue:
SPG20
Human Description:
spastic paraplegia 20 (Troyer syndrome) [Source:HGNC Symbol;Acc:18514]
Mouse Orthologue:
Spg20
Mouse Description:
spastic paraplegia 20, spartin (Troyer syndrome) homolog (human) Gene [Source:MGI Symbol;Acc:MGI:213
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa35950 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa35949 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa5792 | Nonsense | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa35950
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000087053 | Nonsense | 3 | 273 | 2 | 2 |
| ENSDART00000126008 | Nonsense | 3 | 600 | 1 | 8 |
Genomic Location (Zv9):
Chromosome 15 (position 33074261)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 15 | 32942290 |
| GRCz11 | 15 | 32800269 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CATATTAAAACACTTTGACTGCCTTCTTACTTGTCTTTTCAGTCATGGAG[C/T]AAGCAAAGCAAGATCGATTTGATCACGCCAGGCTGCAGGTGATCAAAGAT
Long Flanking Sequence:
CTTCCCATGTTCGCCATTTTGGGCGTCAGTTATTTAGAGTTTTGCCAAAAAAAGCTATATTTTACGAACACATTGAACGTCACTTTAATTCCCTTAAAGTGCTCAAAAGTTCCAGAGCAGCATCATCTTGTGGCCAAAAGTTGTAAAGAAAAATGCTAATAACTTCTGCATTGTTGACCTCATTGTCATGAGATTGATCTTGATATATTTCTTAGATAGTTTTGCAAACATTGATACCAGATTGTCCATAACTTCCTGTTCGCCATTTCGATTTAGTTTGAAAATATACATTTTCATACTCGTTTGTCCAATTTCAACAGATTTGCCTCAGATCATGCTCAGGCCATGCTGACAAAAAGTTATATTTAAAGAATATAAAATATAGCACATTACAGGAGAAAATCATGTACTTGTGTGGCATAGAAACAGTCCTGACTTGTGTAAAGATGCCATATTAAAACACTTTGACTGCCTTCTTACTTGTCTTTTCAGTCATGGAG[C/T]AAGCAAAGCAAGATCGATTTGATCACGCCAGGCTGCAGGTGATCAAAGATGGCTACGAGAAGGCATTTGAATGCATCAATACAGGATTGAACGAGGATGAAGCTGGGCACAAAGAAGAAGCTCTCAAACTGTATCAACAGGGGCGGCAGCACCTCCTCAGGGCTATCAGTGTGCCCTCGCAGGGCGTCGAGTGTGTGGGTCCATCCTGGGAATCAGCTAGACAAATGCAACATAAGATGCAGGAGACCCTCAGCAACATCACCACCCGTCTAGCCATATTAGAAACTACTCCGGCTCCAAACGAAGTCTCGAATGGCACAGCAGCTGCTCAGAAACTCTACCCTGAAGTCCCAAAGGTGATGCCACAGAGGCCAACACCACCCCAAACCATCAACGGCAGGGTCGCAGGGGCTTCAGGTGGGCAGACGTCTCCTACAGTGCAGCCCAATATATTATGCGAGCAGCCCCCTGCATACACCCCTCAAGCTGCTGACGGACAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa35949
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000087053 | Nonsense | 174 | 273 | 2 | 2 |
| ENSDART00000126008 | Nonsense | 174 | 600 | 1 | 8 |
Genomic Location (Zv9):
Chromosome 15 (position 33073746)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 15 | 32942805 |
| GRCz11 | 15 | 32800784 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCCCCTGCATACACCCCTCAAGCTGCTGACGGACACCTGACCATTTCCTA[T/A]GGCACAGATTCAGGCGAACTCTCTGTGGTTGGCGATGAGTTTTACAGTCA
Long Flanking Sequence:
CGATTTGATCACGCCAGGCTGCAGGTGATCAAAGATGGCTACGAGAAGGCATTTGAATGCATCAATACAGGATTGAACGAGGATGAAGCTGGGCACAAAGAAGAAGCTCTCAAACTGTATCAACAGGGGCGGCAGCACCTCCTCAGGGCTATCAGTGTGCCCTCGCAGGGCGTCGAGTGTGTGGGTCCATCCTGGGAATCAGCTAGACAAATGCAACATAAGATGCAGGAGACCCTCAGCAACATCACCACCCGTCTAGCCATATTAGAAACTACTCCGGCTCCAAACGAAGTCTCGAATGGCACAGCAGCTGCTCAGAAACTCTACCCTGAAGTCCCAAAGGTGATGCCACAGAGGCCAACACCACCCCAAACCATCAACGGCAGGGTCGCAGGGGCTTCAGGTGGGCAGACGTCTCCTACAGTGCAGCCCAATATATTATGCGAGCAGCCCCCTGCATACACCCCTCAAGCTGCTGACGGACACCTGACCATTTCCTA[T/A]GGCACAGATTCAGGCGAACTCTCTGTGGTTGGCGATGAGTTTTACAGTCAGACGTCTAATTCTACACCTGCTGGGAGTAGTCTGGGGGAGGATGGAGAGGAACTGTTTTTTCTTCCTCAAGGGGTGCAGATTTTTTTTGTCACCCCTGAGGGGCACGTGAGCGCTCCTTCGTACCCAGGGTACCTGCGAATCGTGAAGTTCACCAGTGAGCACTCAGAAAGGATTCCCAACAGACCACCTGCCTTTCTCCAGGTAAGAATTTACAAAAACAGTCCCTGTTTGGATCAATGGAAAAAATAAATCCACAAGCTAATGTATTGACATTTAAGATTACTATTATCTGGCAATTGTATAAAGCTATGTGTTCCTATTTATATCAATATCATATAATGTGACATTATTTAGCATTTTTGTTGATGTCACATTTAAGCACTGTTTTCCAATTGGGGTTAACCCTGTAAGACCCAAATGTAGAAAATAAAATGAGCAGTTTTCTTTGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa5792
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000087053 | Nonsense | 270 | 273 | 2 | 2 |
| ENSDART00000126008 | None | None | 600 | None | 8 |
Genomic Location (Zv9):
Chromosome 15 (position 33073460)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 15 | 32943091 |
| GRCz11 | 15 | 32801070 |
KASP Assay ID:
554-3516.1 (used for ordering genotyping assays)
KASP Sequence:
CACCTGCCTTTCTCCAGGTAAGAATTTACAAAAASAGTCCCTGTTTGGAT[C/T]AATGGAAAAAANTAAATCSACAAGCTAATKTATTGACATTTAAGATTACTA
Long Flanking Sequence:
ACGAAGTCTCGAATGGCACAGCAGCTGCTCAGAAACTCTACCCTGAAGTCCCAAAGGTGATGCCACAGAGGCCAACACCACCCCAAACCATCAACGGCAGGGTCGCAGGGGCTTCAGGTGGGCAGACGTCTCCTACAGTGCAGCCCAATATATTATGCGAGCAGCCCCCTGCATACACCCCTCAAGCTGCTGACGGACACCTGACCATTTCCTATGGCACAGATTCAGGCGAACTCTCTGTGGTTGGCGATGAGTTTTACAGTCAGACGTCTAATTCTACACCTGCTGGGAGTAGTCTGGGGGAGGATGGAGAGGAACTGTTTTTTCTTCCTCAAGGGGTGCAGATTTTTTTTGTCACCCCTGAGGGGCACGTGAGCGCTCCTTCGTACCCAGGGTACCTGCGAATCGTGAAGTTCACCAGTGAGCACTCAGAAAGGATTCCCAACAGACCACCTGCCTTTCTCCAGGTAAGAATTTACAAAAACAGTCCCTGTTTGGAT[C/T]AATGGAAAAAATAAATCCACAAGCTAATGTATTGACATTTAAGATTACTATTATCTGGCAATTGTATAAAGCTATGTGTTCCTATTTATATCAATATCATATAATGTGACATTATTTAGCATTTTTGTTGATGTCACATTTAAGCACTGTTTTCCAATTGGGGTTAACCCTGTAAGACCCAAATGTAGAAAATAAAATGAGCAGTTTTCTTTGACATCTCAGATATTGTTTTAGGGGGTCTCTGATGTAGGAATTAAATATTTTTTTTTACATTTTGGTAAGTTTTTAGGGAAATGTTGTAATATTGCAACGTTGGGCCTAGTTGTGAGATGAATTTCTGTATTTGTACTCGCTTTGTCTGAACAGGTACTGTAAATAGAGCCTTTAAGCATTCATTTGCAGGGTTATTCAATTACTTAGCCCCATAGCACTATATATCATAAATAATAATCACACAACAATTATATTTTTTATGAATAAGCATTTATGAATAAAAATAT
Associated Phenotype:
Not determined