Busch Lab

ZMP

brca2

Ensembl ID:
ENSDARG00000079015
ZFIN ID:
ZDB-GENE-060510-3
Description:
breast cancer 2, early onset [Source:RefSeq peptide;Acc:NP_001103864]
Human Orthologue:
BRCA2
Human Description:
breast cancer 2, early onset [Source:HGNC Symbol;Acc:1101]
Mouse Orthologue:
Brca2
Mouse Description:
breast cancer 2 Gene [Source:MGI Symbol;Acc:MGI:109337]

Alleles

There are 13 alleles of this gene:

Allele Name Consequence Status Availability
sa22682 Nonsense Available for shipment Available now
sa22683 Nonsense Available for shipment Available now
sa35929 Essential Splice Site Available for shipment Available now
sa32050 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa22682
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111472 Nonsense 1336 2874 11 27
Genomic Location (Zv9):
Chromosome 15 (position 31166234)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 32061886
GRCz11 15 31919865
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGGCAAAGAATCTCTTCAGAGGCTGTGAGGAGGAAAGTTTAACTACTGAA[C/T]AAAACTGTAAAGGTCTCAGCAATGTCTTAATGCTGGCTTGCAATGGTGTT
Long Flanking Sequence:
AATCTACGAATATGGAGGAAAGGAAGACCAAACTAGATGTTGAAATTGTCAAACAAACTAATGCATTGATTTCAAATAGTAAAAGTGTGACATTTTCAGATGTAGAGGAGTTCAAAACTGATCTGATTAACAACTTGGACCAGGAAGCCCCTCAGAAAGAAGTTTGTGAACTGAAAGGCCTTCAAAGTGAATTCTCTAACTTGATTTCCAGTAATGGCAACTGTGGTTTCAGTACAGCAAGTGGTAAGAAGGTGTCCGTCTCAGCTGAAGCACTACAACGAGCAAAAGATGTGTTGTTTGAATCAGTTGATGGTTTCTCGTGTGCTAATGTTTATAAAAAGACAAATCAGGTTGTGGATATCCAACTGGATTCTAGCTCCTCAGGGAAGCATAAAGGGTTCTGTACAGCCGGTGGAAAGAAGGTGGCTTTCTCTGCTACAGGGCTGCAGAAGGCAAAGAATCTCTTCAGAGGCTGTGAGGAGGAAAGTTTAACTACTGAA[C/T]AAAACTGTAAAGGTCTCAGCAATGTCTTAATGCTGGCTTGCAATGGTGTTTCCCTCATTCCTGAACCTGGGAATTCTTCTGGAAATAATGTAGGATTTTCTACAGCAGGTGGGAGGAAGATGGATATTTCTGTGACTGCACTGCAGAAGGCAAACAACCTCTTTAAAGATTGTGAAGAGGAGAGTTTAGCTTCTAGGAGTCTTGCGCACCAAGGCTTCACTACTGCCAGTGGTAAAAATGTTTTTGTCTCTGAAAAAGCTCTGAGTGAAGTTAGAGCAGTATTTGCAGGCTGTGATGAGACTTCTTTTAGTCTTGAGCTTAAAAAGTTATCAGTAAACAATGTAGGATTTTCTACAGCAGGTGGAAAGAAGGTGACTATCTCTGATACTTCTCTGCAAAGGACCATGAACCTTTTTCAAGACTGTGAAGAGGAGAGTTTAGGTTCTCGGAGTCTTAAGCACCAAGGCTGTAAAGGCTTCACTACTGCCAGTGGTAAAAAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa22683
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111472 Nonsense 1845 2874 12 27
Genomic Location (Zv9):
Chromosome 15 (position 31167847)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 32063499
GRCz11 15 31921478
KASP Assay ID:
2260-8731.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CATGTTGTCTTTTTCCTTTGCTAAATACACTCTTTTGTTCAGATTCAGGT[C/T]AGCCTCCTTTGAAAAGACAACTTCTCTCTGAGTTTGACCGAACATTACAT
Long Flanking Sequence:
TTGGAGGAAACTTCAACATTTTTCAGAGAGTTTGATAACCAAAATACTGCTACTGATAACCAACTGCTACTAAGAGATTCCTCAAAACATTACCCTCAGCATAAAGACAGACAAACCAAAGCCACTCTACATCCTAAAGCAGCTCGTAATGAACCTGCACACTTAGACTTGCACTCTTTGGATTTTAACAGTTGCACAGACACACAGCAGATATACTTTGAGCAGGAAGCAATGGCTTGCACTAAAGCTCTACTGGAAGATGATGACTTGATTGAATCAGCTGGATTGATTAGTTCAGAGGACATTGATAACAAAAGAAGACCATCTTTCAGTGATGTACAGACAATAGAATCTGTTGACCAGAACAGGAAGAGGAAACGTCAGGTTGATGGTAGCAGTGTTGCAGGTACATTTGAGCATTTCATGCTGTGTGGCATTTGTATGAAATAACATGTTGTCTTTTTCCTTTGCTAAATACACTCTTTTGTTCAGATTCAGGT[C/T]AGCCTCCTTTGAAAAGACAACTTCTCTCTGAGTTTGACCGAACATTACATGCAAAAACCTCTGGCCTCACACCACTAAAAAGCTGTCCAAATGGTTTGATCATTTTTAATTGTTTCTTGTTTTCATTATGATTTATGATGTCTAACTTGATTCTTATTGATCTCATCCATGTTACCTTGTTGTAGGAACTCTAAAAGACAGACGTGTATTTAAATATAATGTCCACCTCAAGCCCTATGTCACGAGTCCAGTCTTGTAGGTTGTTTTTATGTTTTGATAGATAATTCTTTACAGTGTTAACCACAGGCCATTTTAATTCTTAACATATCTTTTGAACATACAGGTTTCCTGTGAACCAACAGTCAAACAACATTGAAGAACATTGTTCTACTGAATCTGTCCAAAAGAGATGCAATTCAGATCATATGGGAGGGGTATTCAATCCCCCTTTTCAAAAGAATATGAATCCCCCAACATCAAACAGTCAGGATGCATCTAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa35929
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111472 Essential Splice Site 2204 2874 17 27
Genomic Location (Zv9):
Chromosome 15 (position 31169462)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 32065114
GRCz11 15 31923093
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGTGGCCTGTGTTTGACCCCAGAGCAAGTACTTCTACAGCTAAAATTCAG[G/A]TACTGAGAATTAGTAAAGCTCATACTTTTTTTCATCTCAACCTTTAAACA
Long Flanking Sequence:
TCTCAACATGGTGTGCATCACAAAGTCTTAGAAATAACCAGTGAAAATGCTGAATCATTCCGATTTGACTGCAGTGACTACTTCACATGTGAGCATCTCATGGAGTCTGGAGCTTTGCAGCTTGCAGATGGAGGCTGGTTGGTTCCAGACAGTAAGGGTACTGTGGGCAAAGAAGAATTCTTTAGGTAAAAACTATACTTATTGTGTAACATTATCAATATCTGAGTTTAATGGCCCTAGCAGATCTACATTCTAAAAGGCATTATTATCTTGCACAACAACATTTATTTTGAAGGTCGTTTTTGGTAATTCATTTTGTGTTTTGGTAGTGCATTATGTGACACCCCTGGTGTTGATCCCAAACTGATCAGTGATGTCTGGGTGTTCAACCACTACCGATGGATTATATGGAAACGGGCCTCTATGGAAAGAACTTTTCCTAATTTGATTGGTGGCCTGTGTTTGACCCCAGAGCAAGTACTTCTACAGCTAAAATTCAG[G/A]TACTGAGAATTAGTAAAGCTCATACTTTTTTTCATCTCAACCTTTAAACATAAATGTTTGGAATCTGCACTTAGGTATGATGTGGAAGTAGACCACAGTCAGAGATCTGCTCTCAGGAGGATAATGGAGAGGGACGACACTCCAGCTAAAACATTAGTGCTTTGTGTATGTGGTATTGTGCAAACATGCCAAAATCCAGAGAAGACCATGAAAGATGACAAATCTCCCAGTGCAAAGATGGAGTCCTGTGTGATATGGCTTACAGATGGCTGGTACTCCATCAAAAGCCTCTTGGACCCTCCACTCTCTGCCATGCTAAACAAGGGACGTCTTAAAATCGGAGATAAAATCGTGACCAGTGGAGCCGAGTTGGTTGGTTCCCAAGAAGCATGTCCTCCACTGGAAGCTCCTGAATCTCTGATGCTAAAGGTGAAGATTGAATTCAGTCAAGATGGTTTATGGAATCCAAATCACACCAGCATTTGTTGATTTTTGTCATT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa32050
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111472 Essential Splice Site 2756 2874 26 27
Genomic Location (Zv9):
Chromosome 15 (position 31172590)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 32068242
GRCz11 15 31926221
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTCTCCAAGAACTCCTGGTGTGCAGCCTTTTCCAAAAATGAATGGCACGG[T/G]GCGTGAGTTTTCTTTTGTGTGGTGAAAGATTGGTTTTATTAGTGGTGCTT
Long Flanking Sequence:
TGATTTTGGTTGTTTGAATGTCTTCTCAGGCCATTGCCCAGTACTGCATCTTGTGGATGAGAACTTTGACCTGGTCACTGTGAGAACCTACAGTAGTCTGGAGCAGTTAGCAGTTGAAGAGCTTGTAAAGCCACGAGCACTGGTTGCTATTTGTAATCTTCAGGTTCGAGTGCTATCTGGGCCTGTGCCTAGCCTTTATGCAGGAGAACAAGCTTTATTCTCCATAAACCCCAAAGAATCTTACCTGCAAGAAGCTATGGCTCATCTGAAGACATTTGCACAGGTTACCAGATCACCTTTTAAACTTTTGCTATTAAGTACATTTCTTACGTTCTTCATTGTTGCTTATTAGACTTGTGCTTGTTGTTTACAGAACTATGAACAGTTTTTCAACCTTGCGGAGGAGAAGGTGTCAGATGTGGTTCCTTCAGGTGTCTTGGGTTCTTTTCAGTCTCCAAGAACTCCTGGTGTGCAGCCTTTTCCAAAAATGAATGGCACGG[T/G]GCGTGAGTTTTCTTTTGTGTGGTGAAAGATTGGTTTTATTAGTGGTGCTTAAGGCATTCATCTATATAATTAACTTGTTCCATACTGTTTGTTCTTTGTACATGAAAGCAGCTGCATCTGAAGAAAAAAAAGAAAGAAAAGTGTGGTTGTTACTTACCTAGTCATTTTCAAATGATATACAGATGTCTGCATATCAATTTTTATTTTTTTTGTAATTCTTTCTTTTTTTTCAAATATGAAAATATTAAATTTTTACAATGAGATAGAAAAATACTTTTAACAGCTATTACCCTGTGTATATATAACCCCACCCCATTATATGCACATCAGGAGTAATAGAATAACTGTAGTTTAGACCAAGCAGGTAATAAAAAGTACATTACATTTGAATTTCATATTATCCTATGAGTGTTAAGCGTCTAAGATTTCTTTGATGTCACGTATATAGCTTTTCTATACTGTCAAAATGTCTAGTTTACCATGGTTGATCCATTGCTGAT
Associated Phenotype:
Not determined