Busch Lab

ZMP

LOC100006328

Ensembl ID:
ENSDARG00000039999
Human Orthologue:
SLC13A5
Human Description:
solute carrier family 13 (sodium-dependent citrate transporter), member 5 [Source:HGNC Symbol;Acc:23
Mouse Orthologue:
Slc13a5
Mouse Description:
solute carrier family 13 (sodium-dependent citrate transporter), member 5 Gene [Source:MGI Symbol;Ac

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa15957 Essential Splice Site Available for shipment Available now
sa35895 Nonsense Mutation detected in F1 DNA Not yet available
sa42558 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa15957
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000058514 Essential Splice Site 194 607 4 14
Genomic Location (Zv9):
Chromosome 15 (position 25915884)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 26646667
GRCz11 15 26579543
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACCCCTGAGRCGGAGTACAAACACGCGGCCAAAGACAGAGMCAGACAAGG[T/G]CAGGAGAAGARATGAAGCACATACTGTACTGTTCATATGNNNNNNNNNNNNNNNNN
Long Flanking Sequence:
ATTCAAAACATCTCCAGCTGATTATTGACCTAATACTTTAGTAGCATTGGGAATTTTTAACCTATTTTCAAATAGCCACTTTCTACTTTGTGAAGCTCAATAACCTTTTTCTGCATTTCAGAACTATACTCTTTGCCTTGTCTCAATCTGATGGATAAATAGTTGAATTTGTCTTTTGTATATCATCTTTCTACTTTCCCTTGTCTAAACATGCAAATAATATAAATATACTTCAGATATGTTCTGTTTGTGTTCTCATTCTTATCGCCTCTTCTGTGTTAATACAGCCTGATGCTGGGCTTCATGGGGGTAACAGCTTTTCTCTCCATGTGGATCAGTAACACGGCTACTACGGCCATGATGGTCCCCATAGTGCAGGCTGTTCTGGAGCAGCTGAACAAACAGGAGACAGAGCCTTTACAGATGACCTGCGGTGTGGAGCGGCCCCGAACCCCTGAGGCGGAGTACAAACACGCGGCCAAAGACAGAGACAGACAAGG[T/G]CAGGAGAAGAGATGAAGCACATACTGTACTGTTCATATGTTTGGGGTCAGTAAGTTTTTGGGGTCAGGTCAGCAGATTAAAACTTTTAATAAGCCAAAATAATAAGAATGCAAATCAAAGTATTATTATGATTTGTGATGTATGTAATGGTATGGGTGTTTCCCAGTGATGGGTTGCAGGTGGAAGGGCATCTGCTGTGTAAAACATATGCTGGATAAGTTGGCTGTGGTGACCCCTGATTAATAAAGGGACTAAGCTTAATAATGAATTTATGTAAAGTTTGATTGAAATTTCTTATCACAGGAATAACTTACATTAAAATTATATTAATCTAATCTAATCTTTGACAATTTGTTACTTATTTAAATTCAGATTAAAATCATAATTATTTTAATCCAAATAATATTAACTTGAAAAAATATATTACACAAACACAAGAAATTGAAATAAAATAAATATTCATTTATTTTCCTTCAGTTTAGTTCCTGATTTATTAGGGG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa35895
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000058514 Nonsense 371 607 9 14
Genomic Location (Zv9):
Chromosome 15 (position 25919714)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 26650497
GRCz11 15 26583373
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAATACTGTCATAATGATCTCACTTTTTTATTTTTATATTCCACACATTT[A/T]GATATGTGACAGATGCTACAGTTGCAGTCTTTATTGCTATGCTGCTATTT
Long Flanking Sequence:
GCTCTACCTCCAGTTCATTTTCATGGGATTCAAGTATGTTTAAATTTGACACCGTTTACCTCTGCTTTCACCACTGGCCTCATGAAGCTCTTTGTTCACTTTGTTTCCAGCATTAGGAAGACATGGGGATGTGGGGCGGTGAAGTCTGAGAAGGAAATAGCTGCCTATAATGTGATCCGCGAGCAGCATCTTCAGCTGGGGCCCATGTGTTTTGGGGAACTCAGTGTTCTGGCTCTGTTCAGTTTGCTTGTGGCACTGTGGTTTACTCGAGATCCTGGATTTGTGGCAGGCTGGGCAACACACACCTTTAACATCGAAGCGGAGTATGATTTATACTTTAGGCTTCAATCAGGGGTCCAGTGACTAATAGGGGGGTGCGATAATGTGTGGGGAAAAAAAATATTTAAAAAGACTACACTCAAAATATTCTTATATAGCATAGAAATTTTGAAATACTGTCATAATGATCTCACTTTTTTATTTTTATATTCCACACATTT[A/T]GATATGTGACAGATGCTACAGTTGCAGTCTTTATTGCTATGCTGCTATTTGTTCTGCCATCAAAACCACCCCAGCTGTGCTTCAGTTCTTCCACTGGCTCTGAAACAGGTAACTGAAACAAGTCTGACTAAATTATAAAATAAATTAATATCAAGCATGTACAACAGTCATGTAATGTTATAGAGGAGCGACAGCACAAATAAAACTGTGGAAGTATGTTCTTCAGAATCAGTGAAAGCCAAAATAAAAAACTAAACAAATATGGTATCAATTGCACAGCCCTAGTGGGGTTAATTCAGCAAAAATAGCTATTAATCCCCTTCATCTTGTTCAATCTCCCTAAACCAGAGATTGGAACTTACACCAAAATTGGCCCACGGTAACCTAAGGGTTGGGATGAATGCCTGGCAGAAATCATAATTTTGAATTTAACATAATGTTTTGGTTCTTAGTTTAATTGCTAAGCTAAAATTAAAATATTCAATTAAATGTTGTAAATG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa42558
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000058514 Essential Splice Site 407 607 10 14
Genomic Location (Zv9):
Chromosome 15 (position 25921294)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 26652077
GRCz11 15 26584953
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTACTGTTACTGTCAGCTGGAACTGACTGTATACTGTATATTCATTTCC[A/C]GAATCTCAGCGTTCTTCTGCACCAGGCACAGCCCTGCTCTCCTGGAAAGT
Long Flanking Sequence:
TTGGGACAAATGCTTTTTATGAAGGATGAGAAAGCTTTTAGATTTCTTCTAAAATATCTTAACTTGTGTTAATGTGATCATTAAGGTTGCTGGTTCCAGCCCCGGCTGGGTCAGATGGCATTTCTGTGTGAAGTTTGCATGTTCTCCCCATGTTCTTGTCGGTTTCCCCCATAGTCCAAAGACATGCGCTGTAGGTGAATTGGGTAAGCTAAATTGTCCGTAGTGTATGTGTGTATTTCTTGGACCTTGAGGTTGGGAGTTGAGCATTGGGCTAACAACTCACCTCATAAAAACTAGATGTTACAAAACACCATTATGGTGCGGCTAAATATCAACTTCAATATAAAAGGTATTGGGAGTAAGTAATAGTGTGAATTGCTAAAACTAAAAGGGTTCCGCACAATATCAAGGTCTACACTGCAAAATCTGGAGCCTGACTAAAAGTTTGAATTTACTGTTACTGTCAGCTGGAACTGACTGTATACTGTATATTCATTTCC[A/C]GAATCTCAGCGTTCTTCTGCACCAGGCACAGCCCTGCTCTCCTGGAAAGTAGCTCAAAAGAAATTACCCTGGAACATTGTTTTGCTGCTTGGTGGTGGATTTGCTCTGGCCAAAGGGAGTGAGGTGAACACTTTAAACACTCAGTGAAAACAGTCTCTGATTTTGAATCATTATTAATGTTTGATAGCCCTGTATTGAGTTTGAGTCCAACTCTTAGAATTGGCCCAATCCTTTTACTTCACCTCCTGTTGATTATCTACATTGTTCTACCCTGCCCTATTAAACAGTGAGGGAAAGGAAAAAAGTGGGGTGGTGGGGGTTAAAGCTGTATTTTTCATTCACATTTTTTATTTTGATGCTTGAGAATCATTTCGTTCTCAAAATACTGTTGTGTTGACTGTATCCTTAGTGTATGCTTCAATTGTGATCTGCATCTTCAGATGTTTCTTTTGACTCTCAGGAGTCGGGTCTATCCAGATGGTTGGGGAACCAGTTGACTC
Associated Phenotype:
Not determined