ZMP

si:dkey-260j18.3

Ensembl ID:

ENSDARG00000034058

ZFIN ID:

ZDB-GENE-041010-4

Description:

Novel protein similar to procollagen-proline, 2-oxoglutarate 4-dioxygenase (Proline 4-hydroxylase),

Human Orthologue:

P4HA3

Human Description:

prolyl 4-hydroxylase, alpha polypeptide III [Source:HGNC Symbol;Acc:30135]

Mouse Orthologue:

P4ha3

Mouse Description:

procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide III Gen

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa35816	Essential Splice Site	Mutation detected in F1 DNA	Not yet available
sa35817	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa35816

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000043434	Essential Splice Site	233	538	4	13
ENSDART00000147233	Essential Splice Site	287	592	4	13
ENSDART00000148284	None	None	230	None	4

Genomic Location (Zv9):

Chromosome 15 (position 13459517)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	15	14802194
GRCz11	15	14738151

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AAGGCACGCTTGAAGATGCCCTGGACCATTTGGCTTTCTCTCATTTCAAG[G/A]TATGTCACTAATTACAAAACAAATATGATTTTAACCGAGACCCTGTGTTA

Long Flanking Sequence:

AAGTCCAAACTTCTGCACCATGACCGAAACTTCTGCATCCTCACCTGAGTACAGCGAAACAGATTGTTTAGATGGGCTTATATAAATGGCTTGCTTGGTTGTTATAGGCTGATAAGATAATTATTATGTATGACTATTACTATAGTAATGTATTGTAGTATTATAAATGACATAGTAGGTAGGAACACATCAAATAACCAGTGACAATTGTTTGGACTGAAATGTGTAAAACAAAATAAAGTTAAAAAAAGAGCACATGCTGGATGTCATCATCTATTTTCAGCTTTATTTTTCAGTTTCCATGTCATTTTGTGTGTGTGTGTTGTGCTACATCTTCAACAGCTTTATGCTTGTAGGTGGCCTATGATTTGGAAGATTACTACCATTCTGTGCTGTGGTTTGAGGAGGCCGTTCGACTCTTCCGAGGAACCGAATGGAGTCCAGAAAATGAAGGCACGCTTGAAGATGCCCTGGACCATTTGGCTTTCTCTCATTTCAAG[G/A]TATGTCACTAATTACAAAACAAATATGATTTTAACCGAGACCCTGTGTTAACATCTGCTGTTGATAAGGTCTCTTTTGGGTGATCTAAACTAAGGTGTAAATTGGCACAAAATGTTGGTATTGTTTTTGTTTTTTTGTTTTTTTGTTAAATCTCATTTGGTAGTAATCAGAAATGCATGCGGTTGAGTTTTATAATTGTTGCCAGTATATTGATGTGTTCCAGAGAGCAGTGGAAAAATCTACCCATTCAGCCACTGCAGACCAACAAAACAACACAATTTGTGAGCAGATTAAAAGTTATTTAGTATTTAGATTTTTTGTATTTTTTTAAAGCTATCTTTAAAAAAAAATCAATAGAGTGGAGGGATTGGGCAAAAAAAGACTAATCAATGGTTCACACATGATTTACTTACAATATGGGGTTTTAAACTTGTATTTCATGACGTGTAGTATCAGCTCTTTTTCAATCATACCACAGGCAAAAATTAGACTTAGACTTA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa35817

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000043434	Nonsense	299	538	6	13
ENSDART00000147233	Nonsense	353	592	6	13
ENSDART00000148284	None	None	230	None	4

Genomic Location (Zv9):

Chromosome 15 (position 13481167)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	15	14780544
GRCz11	15	14716501

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AGGCCCGACGGCATTTATTTGAGAACCAGGAATGCCTATGAACAGCTCTG[C/A]CAAACCAAAGGATCTCAGGTACCATTTCACTTTTATATTTGTTGTACCTT

Long Flanking Sequence:

AAGACTGATCACGCAAGATTTGAACACATGGTGCAAATGGGGCAAAATATTTTTTTACTGATGTATTTTGAAATACAGTGAACATTTTAGACTTGTTGAGTAACATTTCTAGGTTTTGTTTTGTTTTTGTTTTTTAGACAGGAAACATATCCCACGCCCTCAGTCTCTCCCGGGAACTATTGCTTCATGGTAATCTTCTGCAGTCTTCTAACAGACACTAGCAATAAGTGACATAGTGAGAAACAAAATAAAACAAATCCATTTATTTTACTTGTTTCAAAACTTCATTTGTAAAATTAAATAATCTGGGAGATTTTTCAAAAATTAAAAATCACAAAGTAATGTTGTTTTCAAGATCCCATGAACAGAAGGGTACACTTCAATGTGGAGAAGTACGAGAAACTCCTAAATGAAAATCTACCTGCTACTAGCAGTGGTTTGACTTTGAAAAGGCCCGACGGCATTTATTTGAGAACCAGGAATGCCTATGAACAGCTCTG[C/A]CAAACCAAAGGATCTCAGGTACCATTTCACTTTTATATTTGTTGTACCTTATGATTCAGGGCAAGATGATTTATTTCACATTTATCATGAATTGTTCTATTCAATACCATATGTTAAAAATGTTAAACTGCCCGGCTCTAGACAGTCTGCAACATAATCAAGAATCCACGCCACCAATCGAATAATTCAGAAAAGGAAGAATTATTAAAGTAATTAAAGTAACAAGGTCACATAAATAATCTTTTAAACGAAGAAAAATGCTGGTGCTGGAGGAGACCGATCAGGCACCCTAAATCAAGGCAACAACACAAGCTTCTCTCGATAGAACAAATGAGGAATCCTTTTATCATGCGTTTATAACTGGCAACGCAGCACAACTGTAATCCACTTCAACCTGCCCACATAATGGAACAATTGACCACAAAACAATAGTGCCATATAGTAAACATCCCATCACCAGCAAAAGAAACGCAAAAACAAACCAGTAACAAAAATATTTG

Associated Phenotype:

Not determined