Busch Lab

ZMP

si:dkey-265c15.2

Ensembl ID:
ENSDARG00000074779
ZFIN ID:
ZDB-GENE-030131-4837
Description:
Novel protein [Source:UniProtKB/TrEMBL;Acc:B8A5A1]
Human Orthologue:
ALMS1
Human Description:
Alstrom syndrome 1 [Source:HGNC Symbol;Acc:428]
Mouse Orthologue:
Alms1
Mouse Description:
Alstrom syndrome 1 homolog (human) Gene [Source:MGI Symbol;Acc:MGI:1934606]

Alleles

There are 6 alleles of this gene:

Allele Name Consequence Status Availability
sa16006 Nonsense Available for shipment Available now
sa10311 Nonsense Available for shipment Available now
sa11895 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa16006
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000109126 Nonsense 35 2105 2 18
ENSDART00000140664 None None 1474 None 15
Genomic Location (Zv9):
Chromosome 13 (position 8736144)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 9038764
GRCz11 13 9370787
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGTCAAMAGCATGGACAAAATATACATGATTCAGAAGTTGAWAGACCATA[T/A]GCAGGCCCTGCGAACGATGGAAGACCATTTAATAACCTTCAGGATTCAAG
Long Flanking Sequence:
TACTTACAATATAGTTTGTAAAGTAATATGTTCTGCCTTTTAGTAGATACATTATATGAGAGACTTGCTTTGTTAACAATAAGTAGATCTAATTGGATTTGCATTGTAAACATTAAATAAAAGTTAAGATTGTATTTTTTTAAATTCATATATTAGGTTTTTAGTTATGATACTTATAAAATCATTCCTCATGAGTCCGCAGATTTTTTTTTACAAAATTCTCTGCTGAAATAGCATAAAATGTTTGCAGATTCTGTATGGCCCTAGTTATGACTCATGTAAGGGGATAGTTCACCCAAAAATAAGAGGTAATGTTTTATTTAAGTGTCTTTATATTCTGTATGATTTGAATGAAGGAAGATTGCAGTTTTTAATTGTTAATTGTATAATTGCTTTGCTGTATGAGTAATATATATGGTTTTACCTTTCCAGACCCCTGCAGAAACTCCTTGTCAAAAGCATGGACAAAATATACATGATTCAGAAGTTGATAGACCATA[T/A]GCAGGCCCTGCGAACGATGGAAGACCATTTAATAACCTTCAGGATTCAAGTATACAGCCAATGATGAACCGATTTGAAATTTTACAACTAGGTAAAGAGAGCTGGTGTATGTACAGTGGGCTTCAAAGATCTGAAATCACATTAAAAACTTAAAAACAAATATATCAAGATACTCTTTGGATAATTGCCAAATCACACTGAAGAGCATTATTAGGCTTTATGCAGCTTGAAGTTTATTTTTTTATATTACTAAAGGTATATTTAAAAAAAGAAGCAAGATGTTTGTTTTTCAGATGTTTGAGTCCTACTGTATATGACGTTGTGCCTTAGTGTTACTTTCAAATATGTTGTTTTAATTTAACTTTCTTAATGATTTCAATTCATTTTCTTTTTCAGAGTTTCAGGATAGCCAGCTGTCACCTGCGCTACCTCTGCTTCCCTGCTTGGACAAATCTAACTTTCTTTCTAACTCCAGTGTTTTTCAGGAAACAGATTTAGAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa10311
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000109126 Nonsense 448 2105 4 18
ENSDART00000140664 None None 1474 None 15
Genomic Location (Zv9):
Chromosome 13 (position 8739599)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 9042219
GRCz11 13 9374242
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GTACKCTCAAACAACATCTAGCAAACCACCAAAGACTGAGCAAACAGTCT[C/A]GCATGCCCATTSTGTYTCAAACGAACACATTTCTCCRGCCRTTTTAAATC
Long Flanking Sequence:
TCGCTCAGATGTGTCAAATATAACGTTTCGTGATTCACAGATGGATACACACCAAACAGCAGATCATCTCCACGATCAACTTCTGACTGCAAGTGGCTCCTTGTCTGCACCAGCAAGTAGGCTCCATGGTGGGAACAAAAGTTCTGACAGTGCACAATCTTTCACCATAGCTGGTGAAGATCTGATACATGTTCCAGGTCTGCAGAGAGCTCTTTTGAGCTCTGGTGGTCGTTTAATCGGAGCAGATGGCTCATTCTTGAGCTCTCAGCCTGTGTTTCAGTCAACACCAGCAGTACCTCCCACGAGACCCCTACCTGCATTGACTAAACCATCTCTCATACACTCCAAACAAAAGGCTGTTGCCTCTGCAGCTACGTTACCTCAAAGCAACCAGTCCAGAACTGGCTTGATGCCATTATTGGATCTAAGCGACCAACATTCCTCTTCTATGTACTCTCAAACAACATCTAGCAAACCACCAAAGACTGAGCAAACAGTCT[C/A]GCATGCCCATTCTGTCTCAAACGAACACATTTCTCCGGCCGTTTTAAATCCAACAGCCGCTGACACATCTCGCTCGGACACTCAGCTTTTTTACTCCAGTACAGAGAAGAAAGATCAAGTTTCTCATTTGGCTCTTGGGAGAGTACAGTCTCTTCCCAGTCTCAGCTACTTACAAAAAGTAGATGCCTGGAAAGCCAATCAGAGTTCGAGCAGATCGTTTTGTGATAATTTGGCCCTGCAAGGAGTTGATGGTGTGTCACTAAAGAAGAAAGCGCAGGATGTGGGATCTGATATATTTAACCAAATGGATTCTCGGGACAAGCATCAGGCACTTTGTATGAATGCCAGCTCGCAATCGATTCAGCAACTTTCCTCGTCTCATTCCGGAAGCGTCTCACCTCGTCGTGTTGATGAAGCTGGGGCAAGTGTGTGTAAAGGACAGGCATCCGATTCACCTGTAATTCGCTCACAATCTCACTCCTCCCTGAGCTCTGTGGTGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa11895
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000109126 Nonsense 780 2105 5 18
ENSDART00000140664 Nonsense 149 1474 2 15
Genomic Location (Zv9):
Chromosome 13 (position 8740982)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 9043602
GRCz11 13 9375625
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACTCGTCGTGGACCAATMAGAGAGCCTGAATTCTCTCCTACTGACTTATG[C/A]ACCATCAAAGGCTCCATAGGAACACCAAYCAAAAGCACACAACCATCWGA
Long Flanking Sequence:
AATCCCGGTAAGTTCAGCACTTAAGAAAGACGAAGGCTTAAAATCGTGACGTCTTGATGATCCATTGTAGGCAGTGGTTTATGTGTGTTGTTGCTGTCTGACAGAAAGGTTTAATTGTCTTTAAATATGAGGCAGCAGTTATATCTTATACAATATTATTTTATTGTATTGCAGGGCTCAAAATTAACCTTTTTTGCTTGGTACCACTAAAAATAAATAGTCTGTTAGAGGTTGCTGTACTTCACAATCCAATTAGTATCCCTAAAAACACCAATAATATGTTTGATTGCTAATAAAAGATGTGTGGCATTCATATGTATTACACAATTATCTAAAGAAAGCAGACCCCTTCAAAAGTTTTGTAATAGTATTGTTCTTTTTTTATCTCTGTAGCTCTACCTCCTAAATTTGGGTATCGACCAATCACCTTCTACAATCCTAAATCCCTTTACTCGTCGTGGACCAATCAGAGAGCCTGAATTCTCTCCTACTGACTTATG[C/A]ACCATCAAAGGCTCCATAGGAACACCAACCAAAAGCACACAACCATCTGAAGGTAAGCCAAAGACTACATTTTGTGCACAGTATTATTGCTTCTATAGTGTAGCTAGTCCTATTCGGTTATAAAGCCATATATCTGTATTTCTCTATAGTGGACAGTCTTCAGAAGGAGACATTCTCCAGCTCTAGTCAACACTCAACTGAATCCAGCGCTTCTGTCTCACACCACCTGTCAGTGCATGAGCTAAGCCAGCCAGCCACTGACAGCAGTGTAAAGGTGATATTAACCCAGGCAGATGCTGCACAGCTTCAGTCAACATCACATCCTTCAACAACCCTACAACAATCTGATGCTGCAGAAAGTGAAAGGAGCTTTAGTTTGCCAGTCCCAGAATCAGGGCCTAGAGAAGTGGTAAAAGCGGATGATGACTCTCTTGTGGGTTCTGGCACACTGCATGAAATCAGGCGTTTGCTGGGCCGAGCAGAAAGCCTGGTATCCGGTC
Associated Phenotype:
Not determined