ZMP
lsm12
Ensembl ID:
ZFIN ID:
Description:
Protein LSM12 homolog A [Source:UniProtKB/Swiss-Prot;Acc:Q6PBA2]
Human Orthologue:
LSM12
Human Description:
LSM12 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:26407]
Mouse Orthologue:
Lsm12
Mouse Description:
LSM12 homolog (S. cerevisiae) Gene [Source:MGI Symbol;Acc:MGI:1919592]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa21996 | Essential Splice Site | Available for shipment | Available now |
| sa35183 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa21996
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000067526 | Essential Splice Site | 87 | 196 | 2 | 5 |
Genomic Location (Zv9):
Chromosome 12 (position 3812599)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 12 | 3184032 |
| GRCz11 | 12 | 3295672 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATGACCGCACGGAGACTCCTCCTCCTCTAGCATCCTTGAATATTAGCAAG[G/A]TAAGAACTCACTTTTTCGAACTACTTGTGAGAATATCCGCTCAAGTCGTG
Long Flanking Sequence:
CAGTAACTGTTGGGAATATTTGTTAATAGCACAGTACGGTACACCCTAAAGTTTTAATTGTCATAATTTACCGTTCTTTCACTTTCAAAATCTGTTTGAGTTTCTTCTGTTGAACACAAGAAGATATTTTGAAGAATGCTGGCACCAATTGAATTCCATAGGGAAAAGCTGACTATAGAAGTCGATCATCCAGCATTCTTCAAAATATCTTTTACACAAGGGAGAATAAATGAGATCATTTTAATTTTTGGATGAACTATCCCTTTAAACTAACTAATTTCTCTACCAGAAGGTATTTTAGTGAAAAGCATCTCTATTATTGTGTATTTATGTGTTGGTTTGAGTTCTCCTTAACCCTTCTGCCAGAATGTCCTTCCTCCAGCGGAAAGCCCAACCTCAGTGACGTCATCTTGATTAACTTAGCCTATGTTTCAGAGGTGGATATTATTAATGACCGCACGGAGACTCCTCCTCCTCTAGCATCCTTGAATATTAGCAAG[G/A]TAAGAACTCACTTTTTCGAACTACTTGTGAGAATATCCGCTCAAGTCGTGACATATGAAATACTATGACTGTTTAATGTAAATAATGTTTCCTGGTCCAAGCCACTACTCATTTGAGTCCAGAAAATATTAGTTTCTGGCCACTTTTTAGTGAATTATATATAAATATCATTGAGTTCACTACAGTCTCTGTTAGAGGTGTGAACCTATACTGGTCTCACGGTTCGGTTCGGGTTACGATTATCATGCCATCGATTCGGTTCAATTCGATATCTTGGTGCATCACGGTGCATTGACGATGCTTTCCATACACAGTGTTATATTTTGGGGGGAGGCTATAACAAGCTGTCTGTATAAACACACAACACCACACTGTCTCTCATTCACACACATACACAAACATAGACAGCAACAAACAAACACACACACTTAAGCCCTCGCTTTATGCGTTTAGCCACGAGAGCTCGCGCAGCAATAATAAAAAACAAACAAAACACAAAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa35183
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000067526 | Essential Splice Site | 166 | 196 | 4 | 5 |
Genomic Location (Zv9):
Chromosome 12 (position 3807775)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 12 | 3179208 |
| GRCz11 | 12 | 3290848 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAACTGCAAAGGCAAAGAGGGAAGTGCTCTAAGTCATATACGCAAAATTG[T/A]GAGTATCACGCTATTTATTCGCTTGCTATTTCAGTAGTGTAAAGTTATCT
Long Flanking Sequence:
GACTCAAGAGAAACTAATGATACATTTTGTAAACTGCAGAATCGATTTCCCAAACTGTTTCTCTTCACAGCTCTAGTCCCCCCCCCCCACTTAATTTTCCCCATAAATGGATAGTTTATACAACACTTTTGGCTTAAGTTTAAGAAACCGAGATGAAGACTGCAGTAAAATCTGAAGTCTAGAAGTTGTTTTCTGCTTCGTTTGACTCTCGTCCCCCATTGAGGGGTCTGTCATGATGATTGAATTAAAACTCCAGGTGATTTCAGTGAACACAAGCATCTACTGAGAATACTTGTTTAATCCTATTACAGGATACAGATCTCAGCCGGCGTGCTCCTCTTGAGTTTGTTGTTTGATCTCTTTGTTTTCCAGCATCAAAGACTGTAAATGGCAGGAGAAGAACATCATTGTGATGGATGACGTCGTAATCTCACCACCGTACCAGGTAGAGAACTGCAAAGGCAAAGAGGGAAGTGCTCTAAGTCATATACGCAAAATTG[T/A]GAGTATCACGCTATTTATTCGCTTGCTATTTCAGTAGTGTAAAGTTATCTATACCAGCCTTTTTAAGTTTTGTCTTAAGTCAGATGTGTGAGATTTATCGTAATATTGATGCTTGAAAGAATGAAACTGTAATGAAATTCACACCCCAGTGCAGTGATTTGGTCTACAAGTGCTTTATCATGGCGCCATGCATTCTTATTAGGGAAGTTCATTCACAATTTTTATACATTAGGGTGCTTTCACATCTGTAGTTCGCTTCATTTGGTCCGAACCAAGGGCAATAAACGATACATTGTTGCATTTTCTGCCGTCTTTGGGTCGTTTTCACACCACACTGCTGGCTTTGGTCCGAACCAGTTGAAACGAACCAGAATGGAGTCATCTGACAAAATCCACATCTCTCATTGGCCAGATGTTGTTGAACATATTTCCTAAACTGCTTATTGATTGGTCAGAATTCGCGTGTCGGAAAATGCCAATGAACTCCCGCAGGTAAACAA
Associated Phenotype:
Not determined